RNA–Protein interactions for RNA: ENST00000466411.1

CLDN4-204, Transcript of claudin 4, humanhuman

TSL 4

Gene CLDN4, Length 593 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4-204ENST00000466411 UPF2Q9HAU5 1272 aaKnown RBP8.15□□□□□ -1.1
CLDN4-204ENST00000466411 EPB41L4AQ9HCS5 686 aaPredicted RBP8.15□□□□□ -1.1
CLDN4-204ENST00000466411 ANO2Q9NQ90 1003 aa8.15□□□□□ -1.1
CLDN4-204ENST00000466411 MSRAQ9UJ68 235 aa8.15□□□□□ -1.1
CLDN4-204ENST00000466411 TBX21Q9UL17 535 aa8.15□□□□□ -1.1
CLDN4-204ENST00000466411 ZBTB21Q9ULJ3 1066 aa8.15□□□□□ -1.1
CLDN4-204ENST00000466411 PHF24Q9UPV7 400 aa8.15□□□□□ -1.1
CLDN4-204ENST00000466411 GTF3C3Q9Y5Q9 886 aa8.15□□□□□ -1.1
CLDN4-204ENST00000466411 ATRXP46100 2492 aa8.15□□□□□ -1.1
CLDN4-204ENST00000466411 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP8.14□□□□□ -1.11
CLDN4-204ENST00000466411 TSPY2A6NKD2 308 aa8.14□□□□□ -1.11
CLDN4-204ENST00000466411 USP17L10C9JJH3 530 aa8.14□□□□□ -1.11
CLDN4-204ENST00000466411 KBTBD13C9JR72 458 aa8.14□□□□□ -1.11
CLDN4-204ENST00000466411 MPHOSPH10O00566 681 aaKnown RBP8.14□□□□□ -1.11
CLDN4-204ENST00000466411 MYOGP15173 224 aa8.14□□□□□ -1.11
CLDN4-204ENST00000466411 CYP2C19P33261 490 aa8.14□□□□□ -1.11
CLDN4-204ENST00000466411 HMGCS2P54868 508 aa8.14□□□□□ -1.11
CLDN4-204ENST00000466411 SPP2Q13103 211 aa8.14□□□□□ -1.11
CLDN4-204ENST00000466411 CSPP1Q1MSJ5 1256 aa8.14□□□□□ -1.11
CLDN4-204ENST00000466411 MFSD14CQ5VZR4 134 aa8.14□□□□□ -1.11
CLDN4-204ENST00000466411 PLEKHH3Q7Z736 793 aa8.14□□□□□ -1.11
CLDN4-204ENST00000466411 SLC44A5Q8NCS7 719 aa8.14□□□□□ -1.11
CLDN4-204ENST00000466411 ZNF280CQ8ND82 737 aa8.14□□□□□ -1.11
CLDN4-204ENST00000466411 COL26A1Q96A83 441 aa8.14□□□□□ -1.11
CLDN4-204ENST00000466411 GOPCQ9HD26 462 aa8.14□□□□□ -1.11
CLDN4-204ENST00000466411 TMEM39AQ9NV64 488 aa8.14□□□□□ -1.11
CLDN4-204ENST00000466411 VPS13AQ96RL7 3174 aa8.14□□□□□ -1.11
CLDN4-204ENST00000466411 CHD6Q8TD26 2715 aa8.13□□□□□ -1.11
CLDN4-204ENST00000466411 WDR19Q8NEZ3 1342 aa8.13□□□□□ -1.11
CLDN4-204ENST00000466411 ERICH2A1L162 156 aa8.13□□□□□ -1.11
CLDN4-204ENST00000466411 DCXO43602 365 aa8.13□□□□□ -1.11
CLDN4-204ENST00000466411 TTLL1O95922 423 aa8.13□□□□□ -1.11
CLDN4-204ENST00000466411 ACRP10323 421 aa8.13□□□□□ -1.11
CLDN4-204ENST00000466411 CSF2RAP15509 400 aa8.13□□□□□ -1.11
CLDN4-204ENST00000466411 CNGA1P29973 690 aa8.13□□□□□ -1.11
CLDN4-204ENST00000466411 HERVK_113P62684 666 aa8.13□□□□□ -1.11
CLDN4-204ENST00000466411 ERVK-9P63128 1117 aa8.13□□□□□ -1.11
CLDN4-204ENST00000466411 ERVK-24P63145 666 aa8.13□□□□□ -1.11
CLDN4-204ENST00000466411 ICA1Q05084 483 aa8.13□□□□□ -1.11
CLDN4-204ENST00000466411 VPS53Q5VIR6 699 aa8.13□□□□□ -1.11
CLDN4-204ENST00000466411 ANO1Q5XXA6 986 aa8.13□□□□□ -1.11
CLDN4-204ENST00000466411 TTC13Q8NBP0 860 aa8.13□□□□□ -1.11
CLDN4-204ENST00000466411 GADD45GIP1Q8TAE8 222 aaPredicted RBP8.13□□□□□ -1.11
CLDN4-204ENST00000466411 VWCEQ96DN2 955 aa8.13□□□□□ -1.11
CLDN4-204ENST00000466411 TTC14Q96N46 770 aa8.13□□□□□ -1.11
CLDN4-204ENST00000466411 FEZ1Q99689 392 aa8.13□□□□□ -1.11
CLDN4-204ENST00000466411 KIAA1683Q9H0B3 1180 aa8.13□□□□□ -1.11
CLDN4-204ENST00000466411 DNAJC18Q9H819 358 aa8.13□□□□□ -1.11
CLDN4-204ENST00000466411 TOMM22Q9NS69 142 aa8.13□□□□□ -1.11
CLDN4-204ENST00000466411 TCP11L1Q9NUJ3 509 aa8.13□□□□□ -1.11
CLDN4-204ENST00000466411 TMOD4Q9NZQ9 345 aa8.13□□□□□ -1.11
CLDN4-204ENST00000466411 NYAP2Q9P242 653 aa8.13□□□□□ -1.11
CLDN4-204ENST00000466411 NCOR2Q9Y618 2525 aa8.13□□□□□ -1.11
CLDN4-204ENST00000466411 GVINP1Q7Z2Y8 2422 aa8.13□□□□□ -1.11
CLDN4-204ENST00000466411 FOXP2O15409 715 aa8.12□□□□□ -1.11
CLDN4-204ENST00000466411 SEPT4O43236 478 aa8.12□□□□□ -1.11
CLDN4-204ENST00000466411 RANBP6O60518 1105 aaKnown RBP8.12□□□□□ -1.11
CLDN4-204ENST00000466411 LPXNO60711 386 aa8.12□□□□□ -1.11
CLDN4-204ENST00000466411 CNMDO75829 334 aa8.12□□□□□ -1.11
CLDN4-204ENST00000466411 GH2P01242 217 aa8.12□□□□□ -1.11
CLDN4-204ENST00000466411 CHGBP05060 677 aa8.12□□□□□ -1.11
CLDN4-204ENST00000466411 RASA1P20936 1047 aa8.12□□□□□ -1.11
CLDN4-204ENST00000466411 PSMA5P28066 241 aa8.12□□□□□ -1.11
CLDN4-204ENST00000466411 RABGGTBP53611 331 aa8.12□□□□□ -1.11
CLDN4-204ENST00000466411 PTPN5P54829 565 aa8.12□□□□□ -1.11
CLDN4-204ENST00000466411 BACE1P56817 501 aa8.12□□□□□ -1.11
CLDN4-204ENST00000466411 ANAPC15P60006 121 aa8.12□□□□□ -1.11
CLDN4-204ENST00000466411 PPIGQ13427 754 aaKnown RBP eCLIP8.12□□□□□ -1.11
CLDN4-204ENST00000466411 RRP1BQ14684 758 aaKnown RBP8.12□□□□□ -1.11
CLDN4-204ENST00000466411 RAB3GAP1Q15042 981 aa8.12□□□□□ -1.11
CLDN4-204ENST00000466411 TSGA10IPQ3SY00 556 aa8.12□□□□□ -1.11
CLDN4-204ENST00000466411 SLFNL1Q499Z3 407 aa8.12□□□□□ -1.11
CLDN4-204ENST00000466411 RCSD1Q6JBY9 416 aa8.12□□□□□ -1.11
CLDN4-204ENST00000466411 USP17L2Q6R6M4 530 aa8.12□□□□□ -1.11
CLDN4-204ENST00000466411 TMTC2Q8N394 836 aa8.12□□□□□ -1.11
CLDN4-204ENST00000466411 NEDD1Q8NHV4 660 aa8.12□□□□□ -1.11
CLDN4-204ENST00000466411 NCOA7Q8NI08 942 aa8.12□□□□□ -1.11
CLDN4-204ENST00000466411 C12orf42Q96LP6 360 aa8.12□□□□□ -1.11
CLDN4-204ENST00000466411 UBAC1Q9BSL1 405 aa8.12□□□□□ -1.11
CLDN4-204ENST00000466411 LSG1Q9H089 658 aaKnown RBP8.12□□□□□ -1.11
CLDN4-204ENST00000466411 PNMA2Q9UL42 364 aa8.12□□□□□ -1.11
CLDN4-204ENST00000466411 DDX52Q9Y2R4 599 aaKnown RBP eCLIP8.12□□□□□ -1.11
CLDN4-204ENST00000466411 RBM8AQ9Y5S9 174 aaKnown RBP8.12□□□□□ -1.11
CLDN4-204ENST00000466411 ACACBO00763 2458 aa8.12□□□□□ -1.11
CLDN4-204ENST00000466411 DMXL1Q9Y485 3027 aa8.11□□□□□ -1.11
CLDN4-204ENST00000466411 MED19A0JLT2 244 aaPredicted RBP8.11□□□□□ -1.11
CLDN4-204ENST00000466411 PROB1E7EW31 1015 aa8.11□□□□□ -1.11
CLDN4-204ENST00000466411 PQBP1O60828 265 aaKnown RBP8.11□□□□□ -1.11
CLDN4-204ENST00000466411 GDF11O95390 407 aa8.11□□□□□ -1.11
CLDN4-204ENST00000466411 FDX1P10109 184 aa8.11□□□□□ -1.11
CLDN4-204ENST00000466411 PTPREP23469 700 aa8.11□□□□□ -1.11
CLDN4-204ENST00000466411 MCM5P33992 734 aa8.11□□□□□ -1.11
CLDN4-204ENST00000466411 FAM47AQ5JRC9 791 aa8.11□□□□□ -1.11
CLDN4-204ENST00000466411 PPP2R2DQ66LE6 453 aa8.11□□□□□ -1.11
CLDN4-204ENST00000466411 DGKHQ86XP1 1220 aa8.11□□□□□ -1.11
CLDN4-204ENST00000466411 GMCL1P1Q8NEA9 526 aa8.11□□□□□ -1.11
CLDN4-204ENST00000466411 DYNLL2Q96FJ2 89 aa8.11□□□□□ -1.11
CLDN4-204ENST00000466411 MFSD14AQ96MC6 490 aa8.11□□□□□ -1.11
CLDN4-204ENST00000466411 PCDHA11Q9Y5I1 949 aa8.11□□□□□ -1.11
CLDN4-204ENST00000466411 KMT2EQ8IZD2 1858 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms