RNA–Protein interactions for RNA: ENST00000465902.1

USP19-210, Transcript of ubiquitin specific peptidase 19, human

TSL 3

Gene USP19, Length 617 nt, Biotype processed transcript, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
USP19-210	ENST00000465902	CDKN2AIP	Q9NXV6	580 aa	Predicted RBP	20.56	■□□□□ 0.88
USP19-210	ENST00000465902	ADD3	Q9UEY8	706 aa	Known RBP	20.56	■□□□□ 0.88
USP19-210	ENST00000465902	DDX20	Q9UHI6	824 aa	Known RBP	20.56	■□□□□ 0.88
USP19-210	ENST00000465902	ASB14	A6NK59	587 aa		20.55	■□□□□ 0.88
USP19-210	ENST00000465902	MSC	O60682	206 aa		20.55	■□□□□ 0.88
USP19-210	ENST00000465902	CFB	P00751	764 aa		20.55	■□□□□ 0.88
USP19-210	ENST00000465902	MYCN	P04198	464 aa	Predicted RBP	20.55	■□□□□ 0.88
USP19-210	ENST00000465902	SMARCA1	P28370	1054 aa		20.55	■□□□□ 0.88
USP19-210	ENST00000465902	TMTC3	Q6ZXV5	915 aa		20.55	■□□□□ 0.88
USP19-210	ENST00000465902	TBC1D5	Q92609	795 aa		20.55	■□□□□ 0.88
USP19-210	ENST00000465902	hCG_1642624	A0A1W2PR95	340 aa		20.54	■□□□□ 0.88
USP19-210	ENST00000465902	SEPT4	O43236	478 aa		20.54	■□□□□ 0.88
USP19-210	ENST00000465902	FARP2	O94887	1054 aa	Predicted RBP	20.54	■□□□□ 0.88
USP19-210	ENST00000465902	SNAI1	O95863	264 aa	Predicted RBP	20.54	■□□□□ 0.88
USP19-210	ENST00000465902	METAP2	P50579	478 aa	Known RBP eCLIP	20.54	■□□□□ 0.88
USP19-210	ENST00000465902	RGS22	Q8NE09	1264 aa		20.54	■□□□□ 0.88
USP19-210	ENST00000465902	NRBP1	Q9UHY1	535 aa		20.54	■□□□□ 0.88
USP19-210	ENST00000465902	DDX49	Q9Y6V7	483 aa	Known RBP	20.54	■□□□□ 0.88
USP19-210	ENST00000465902	ANAPC15	P60006	121 aa		20.53	■□□□□ 0.88
USP19-210	ENST00000465902	ACVR2B	Q13705	512 aa		20.53	■□□□□ 0.88
USP19-210	ENST00000465902	C8orf34	Q49A92	452 aa		20.53	■□□□□ 0.88
USP19-210	ENST00000465902	LHX8	Q68G74	356 aa		20.53	■□□□□ 0.88
USP19-210	ENST00000465902	EEPD1	Q7L9B9	569 aa		20.53	■□□□□ 0.88
USP19-210	ENST00000465902	MPHOSPH6	Q99547	160 aa	Known RBP	20.53	■□□□□ 0.88
USP19-210	ENST00000465902	ABHD16B	Q9H3Z7	469 aa		20.53	■□□□□ 0.88
USP19-210	ENST00000465902	PDRG1	Q9NUG6	133 aa		20.53	■□□□□ 0.88
USP19-210	ENST00000465902	OGDHL	Q9ULD0	1010 aa		20.53	■□□□□ 0.88
USP19-210	ENST00000465902	ZNF865	P0CJ78	1059 aa	Predicted RBP	20.52	■□□□□ 0.88
USP19-210	ENST00000465902	ALDH5A1	P51649	535 aa	Predicted RBP	20.52	■□□□□ 0.88
USP19-210	ENST00000465902	HTATIP2	Q9BUP3	242 aa		20.52	■□□□□ 0.88
USP19-210	ENST00000465902	FAM184B	Q9ULE4	1060 aa		20.52	■□□□□ 0.88
USP19-210	ENST00000465902	ASTN1	O14525	1302 aa		20.52	■□□□□ 0.87
USP19-210	ENST00000465902	CCDC196	A0A1B0GTZ2	297 aa		20.51	■□□□□ 0.87
USP19-210	ENST00000465902	RARB	P10826	455 aa		20.51	■□□□□ 0.87
USP19-210	ENST00000465902	AKR1A1	P14550	325 aa		20.51	■□□□□ 0.87
USP19-210	ENST00000465902	FBXL16	Q8N461	479 aa		20.51	■□□□□ 0.87
USP19-210	ENST00000465902	DPF3	Q92784	378 aa		20.51	■□□□□ 0.87
USP19-210	ENST00000465902	PAWR	Q96IZ0	340 aa	Known RBP	20.51	■□□□□ 0.87
USP19-210	ENST00000465902	LARP6	Q9BRS8	491 aa	Known RBP	20.51	■□□□□ 0.87
USP19-210	ENST00000465902	AGXT2	Q9BYV1	514 aa		20.51	■□□□□ 0.87
USP19-210	ENST00000465902		B4DLN1	442 aa		20.5	■□□□□ 0.87
USP19-210	ENST00000465902	CDC27	P30260	824 aa		20.5	■□□□□ 0.87
USP19-210	ENST00000465902	HOXA13	P31271	388 aa	Predicted RBP	20.5	■□□□□ 0.87
USP19-210	ENST00000465902	ADD1	P35611	737 aa	Known RBP	20.5	■□□□□ 0.87
USP19-210	ENST00000465902	MRPL12	P52815	198 aa	Known RBP	20.5	■□□□□ 0.87
USP19-210	ENST00000465902	RCAN1	P53805	252 aa		20.5	■□□□□ 0.87
USP19-210	ENST00000465902	PDE4D	Q08499	809 aa		20.5	■□□□□ 0.87
USP19-210	ENST00000465902	TOB2	Q14106	344 aa	Predicted RBP	20.5	■□□□□ 0.87
USP19-210	ENST00000465902	PPP2R5B	Q15173	497 aa		20.5	■□□□□ 0.87
USP19-210	ENST00000465902	CCDC144B	Q3MJ40	725 aa		20.5	■□□□□ 0.87
USP19-210	ENST00000465902	NOL8	Q76FK4	1167 aa	Known RBP	20.5	■□□□□ 0.87
USP19-210	ENST00000465902	ANKLE1	Q8NAG6	615 aa		20.5	■□□□□ 0.87
USP19-210	ENST00000465902	DNER	Q8NFT8	737 aa		20.5	■□□□□ 0.87
USP19-210	ENST00000465902	SYTL5	Q8TDW5	730 aa	Predicted RBP	20.5	■□□□□ 0.87
USP19-210	ENST00000465902	TAAR1	Q96RJ0	339 aa		20.5	■□□□□ 0.87
USP19-210	ENST00000465902	MAF1	Q9H063	256 aa		20.5	■□□□□ 0.87
USP19-210	ENST00000465902	CEP290	O15078	2479 aa		20.49	■□□□□ 0.87
USP19-210	ENST00000465902		H0YGN5	161 aa		20.49	■□□□□ 0.87
USP19-210	ENST00000465902	GCOM1	H8Y6P7	765 aa	Predicted RBP	20.49	■□□□□ 0.87
USP19-210	ENST00000465902	OPLAH	O14841	1288 aa		20.49	■□□□□ 0.87
USP19-210	ENST00000465902	POLR2M	P0CAP2	368 aa		20.49	■□□□□ 0.87
USP19-210	ENST00000465902	CCT2	P78371	535 aa	Known RBP	20.49	■□□□□ 0.87
USP19-210	ENST00000465902	ARHGEF16	Q5VV41	709 aa		20.49	■□□□□ 0.87
USP19-210	ENST00000465902	HEATR3	Q7Z4Q2	680 aa		20.49	■□□□□ 0.87
USP19-210	ENST00000465902	NECAB2	Q7Z6G3	386 aa		20.49	■□□□□ 0.87
USP19-210	ENST00000465902	FBXO16	Q8IX29	292 aa	Predicted RBP	20.49	■□□□□ 0.87
USP19-210	ENST00000465902	ARRDC4	Q8NCT1	418 aa		20.49	■□□□□ 0.87
USP19-210	ENST00000465902	DIS3L	Q8TF46	1054 aa	Known RBP	20.49	■□□□□ 0.87
USP19-210	ENST00000465902	LENG1	Q96BZ8	264 aa	Predicted RBP	20.49	■□□□□ 0.87
USP19-210	ENST00000465902	RMDN3	Q96TC7	470 aa		20.49	■□□□□ 0.87
USP19-210	ENST00000465902	XPNPEP3	Q9NQH7	507 aa		20.49	■□□□□ 0.87
USP19-210	ENST00000465902	COL20A1	Q9P218	1284 aa		20.49	■□□□□ 0.87
USP19-210	ENST00000465902		V9GY48	417 aa	Predicted RBP	20.49	■□□□□ 0.87
USP19-210	ENST00000465902	CNTNAP5	Q8WYK1	1306 aa		20.49	■□□□□ 0.87
USP19-210	ENST00000465902	PDIA3	P30101	505 aa	Known RBP	20.48	■□□□□ 0.87
USP19-210	ENST00000465902	GJC2	Q5T442	439 aa	Predicted RBP	20.48	■□□□□ 0.87
USP19-210	ENST00000465902	FCHSD1	Q86WN1	690 aa		20.48	■□□□□ 0.87
USP19-210	ENST00000465902	NSUN6	Q8TEA1	469 aa	Known RBP	20.48	■□□□□ 0.87
USP19-210	ENST00000465902	FAM217B	Q9NTX9	383 aa	Predicted RBP	20.48	■□□□□ 0.87
USP19-210	ENST00000465902	DNAH12	Q6ZR08	3092 aa		20.47	■□□□□ 0.87
USP19-210	ENST00000465902	LOC102724159	A0A0B4J2E5	919 aa		20.47	■□□□□ 0.87
USP19-210	ENST00000465902	EIF2AK2	P19525	551 aa	Known RBP	20.47	■□□□□ 0.87
USP19-210	ENST00000465902	HSD17B4	P51659	736 aa		20.47	■□□□□ 0.87
USP19-210	ENST00000465902	STK3	Q13188	491 aa		20.47	■□□□□ 0.87
USP19-210	ENST00000465902	PWP2	Q15269	919 aa	Known RBP	20.47	■□□□□ 0.87
USP19-210	ENST00000465902	HABP4	Q5JVS0	413 aa	Known RBP	20.47	■□□□□ 0.87
USP19-210	ENST00000465902	GPKOW	Q92917	476 aa	Predicted RBP eCLIP	20.47	■□□□□ 0.87
USP19-210	ENST00000465902	CUL5	Q93034	780 aa		20.47	■□□□□ 0.87
USP19-210	ENST00000465902	NCOA5	Q9HCD5	579 aa	Known RBP	20.47	■□□□□ 0.87
USP19-210	ENST00000465902	VTA1	Q9NP79	307 aa		20.47	■□□□□ 0.87
USP19-210	ENST00000465902	MAP3K20	Q9NYL2	800 aa	Known RBP	20.47	■□□□□ 0.87
USP19-210	ENST00000465902	LRRC37A2	A6NM11	1700 aa		20.47	■□□□□ 0.87
USP19-210	ENST00000465902	KBTBD13	C9JR72	458 aa		20.46	■□□□□ 0.87
USP19-210	ENST00000465902	PGK1	P00558	417 aa		20.46	■□□□□ 0.87
USP19-210	ENST00000465902	ADCYAP1R1	P41586	468 aa		20.46	■□□□□ 0.87
USP19-210	ENST00000465902	MNX1	P50219	401 aa	Predicted RBP	20.46	■□□□□ 0.87
USP19-210	ENST00000465902	AKAP17A	Q02040	695 aa	Known RBP	20.46	■□□□□ 0.87
USP19-210	ENST00000465902	TNFAIP2	Q03169	654 aa		20.46	■□□□□ 0.87
USP19-210	ENST00000465902	SAMD3	Q8N6K7	520 aa		20.46	■□□□□ 0.87
USP19-210	ENST00000465902	SMARCC2	Q8TAQ2	1214 aa		20.46	■□□□□ 0.87

Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms