RNA–Protein interactions for RNA: ENST00000465877.1

COL5A1-206, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 3

Gene COL5A1, Length 583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-206ENST00000465877 RARBP10826 455 aa14.96□□□□□ -0.01
COL5A1-206ENST00000465877 RPS6KB1P23443 525 aa14.96□□□□□ -0.01
COL5A1-206ENST00000465877 GNAQP50148 359 aa14.96□□□□□ -0.01
COL5A1-206ENST00000465877 ACVR2BQ13705 512 aa14.96□□□□□ -0.01
COL5A1-206ENST00000465877 PWP2Q15269 919 aaKnown RBP14.96□□□□□ -0.01
COL5A1-206ENST00000465877 TMTC3Q6ZXV5 915 aa14.96□□□□□ -0.01
COL5A1-206ENST00000465877 RGS22Q8NE09 1264 aa14.96□□□□□ -0.01
COL5A1-206ENST00000465877 LZTS2Q9BRK4 669 aa14.96□□□□□ -0.01
COL5A1-206ENST00000465877 HTATIP2Q9BUP3 242 aa14.96□□□□□ -0.01
COL5A1-206ENST00000465877 C11orf49Q9H6J7 331 aa14.96□□□□□ -0.01
COL5A1-206ENST00000465877 PNMA6FA0A0J9YX94 578 aa14.95□□□□□ -0.02
COL5A1-206ENST00000465877 ZBTB43O43298 467 aa14.95□□□□□ -0.02
COL5A1-206ENST00000465877 COL6A1P12109 1028 aa14.95□□□□□ -0.02
COL5A1-206ENST00000465877 PSMA5P28066 241 aa14.95□□□□□ -0.02
COL5A1-206ENST00000465877 FGD1P98174 961 aa14.95□□□□□ -0.02
COL5A1-206ENST00000465877 CCDC144BQ3MJ40 725 aa14.95□□□□□ -0.02
COL5A1-206ENST00000465877 SYNE3Q6ZMZ3 975 aa14.95□□□□□ -0.02
COL5A1-206ENST00000465877 Q6ZUG5 572 aa14.95□□□□□ -0.02
COL5A1-206ENST00000465877 MCF2L2Q86YR7 1114 aa14.95□□□□□ -0.02
COL5A1-206ENST00000465877 FBXO16Q8IX29 292 aaPredicted RBP14.95□□□□□ -0.02
COL5A1-206ENST00000465877 CMTR1Q8N1G2 835 aaKnown RBP14.95□□□□□ -0.02
COL5A1-206ENST00000465877 DNERQ8NFT8 737 aa14.95□□□□□ -0.02
COL5A1-206ENST00000465877 MORC4Q8TE76 937 aa14.95□□□□□ -0.02
COL5A1-206ENST00000465877 PIBF1Q8WXW3 757 aa14.95□□□□□ -0.02
COL5A1-206ENST00000465877 MAF1Q9H063 256 aa14.95□□□□□ -0.02
COL5A1-206ENST00000465877 XPNPEP3Q9NQH7 507 aa14.95□□□□□ -0.02
COL5A1-206ENST00000465877 RBM28Q9NW13 759 aaKnown RBP14.95□□□□□ -0.02
COL5A1-206ENST00000465877 COL20A1Q9P218 1284 aa14.95□□□□□ -0.02
COL5A1-206ENST00000465877 SEC63Q9UGP8 760 aaKnown RBP14.95□□□□□ -0.02
COL5A1-206ENST00000465877 BRPF3Q9ULD4 1205 aa14.95□□□□□ -0.02
COL5A1-206ENST00000465877 PCDHA1Q9Y5I3 950 aa14.95□□□□□ -0.02
COL5A1-206ENST00000465877 DOCK5Q9H7D0 1870 aa14.95□□□□□ -0.02
COL5A1-206ENST00000465877 GOLGA8AA7E2F4 631 aa14.94□□□□□ -0.02
COL5A1-206ENST00000465877 GOLGA8BA8MQT2 603 aa14.94□□□□□ -0.02
COL5A1-206ENST00000465877 KBTBD13C9JR72 458 aa14.94□□□□□ -0.02
COL5A1-206ENST00000465877 SMARCA1P28370 1054 aa14.94□□□□□ -0.02
COL5A1-206ENST00000465877 RCAN1P53805 252 aa14.94□□□□□ -0.02
COL5A1-206ENST00000465877 GHRHRQ02643 423 aa14.94□□□□□ -0.02
COL5A1-206ENST00000465877 TRAF1Q13077 416 aa14.94□□□□□ -0.02
COL5A1-206ENST00000465877 RTN1Q16799 776 aa14.94□□□□□ -0.02
COL5A1-206ENST00000465877 SRBD1Q8N5C6 995 aaKnown RBP14.94□□□□□ -0.02
COL5A1-206ENST00000465877 FANCBQ8NB91 859 aa14.94□□□□□ -0.02
COL5A1-206ENST00000465877 SYTL5Q8TDW5 730 aaPredicted RBP14.94□□□□□ -0.02
COL5A1-206ENST00000465877 BRF1Q92994 677 aa14.94□□□□□ -0.02
COL5A1-206ENST00000465877 RRP36Q96EU6 259 aaKnown RBP14.94□□□□□ -0.02
COL5A1-206ENST00000465877 MPHOSPH6Q99547 160 aaKnown RBP14.94□□□□□ -0.02
COL5A1-206ENST00000465877 VTA1Q9NP79 307 aa14.94□□□□□ -0.02
COL5A1-206ENST00000465877 FAM184BQ9ULE4 1060 aa14.94□□□□□ -0.02
COL5A1-206ENST00000465877 RANBP2P49792 3224 aaKnown RBP14.93□□□□□ -0.02
COL5A1-206ENST00000465877 ADAMTS4O75173 837 aa14.93□□□□□ -0.02
COL5A1-206ENST00000465877 PGK1P00558 417 aa14.93□□□□□ -0.02
COL5A1-206ENST00000465877 CFBP00751 764 aa14.93□□□□□ -0.02
COL5A1-206ENST00000465877 EDNRBP24530 442 aa14.93□□□□□ -0.02
COL5A1-206ENST00000465877 HSD17B4P51659 736 aa14.93□□□□□ -0.02
COL5A1-206ENST00000465877 APOBRQ0VD83 1088 aa14.93□□□□□ -0.02
COL5A1-206ENST00000465877 LRRC41Q15345 812 aa14.93□□□□□ -0.02
COL5A1-206ENST00000465877 GJC2Q5T442 439 aaPredicted RBP14.93□□□□□ -0.02
COL5A1-206ENST00000465877 RUFY3Q7L099 469 aa14.93□□□□□ -0.02
COL5A1-206ENST00000465877 EEPD1Q7L9B9 569 aa14.93□□□□□ -0.02
COL5A1-206ENST00000465877 ARRDC4Q8NCT1 418 aa14.93□□□□□ -0.02
COL5A1-206ENST00000465877 TBC1D5Q92609 795 aa14.93□□□□□ -0.02
COL5A1-206ENST00000465877 AGXT2Q9BYV1 514 aa14.93□□□□□ -0.02
COL5A1-206ENST00000465877 NAP1L2Q9ULW6 460 aaPredicted RBP14.93□□□□□ -0.02
COL5A1-206ENST00000465877 MYH7BA7E2Y1 1941 aa14.92□□□□□ -0.02
COL5A1-206ENST00000465877 C11orf97A0A1B0GVM6 126 aaPredicted RBP14.92□□□□□ -0.02
COL5A1-206ENST00000465877 DUSP11O75319 330 aaKnown RBP14.92□□□□□ -0.02
COL5A1-206ENST00000465877 MYCNP04198 464 aaPredicted RBP14.92□□□□□ -0.02
COL5A1-206ENST00000465877 ADCYAP1R1P41586 468 aa14.92□□□□□ -0.02
COL5A1-206ENST00000465877 PDE4DQ08499 809 aa14.92□□□□□ -0.02
COL5A1-206ENST00000465877 PRPF38BQ5VTL8 546 aaKnown RBP14.92□□□□□ -0.02
COL5A1-206ENST00000465877 RNF180Q86T96 592 aa14.92□□□□□ -0.02
COL5A1-206ENST00000465877 FBXL16Q8N461 479 aa14.92□□□□□ -0.02
COL5A1-206ENST00000465877 ZSWIM6Q9HCJ5 1215 aa14.92□□□□□ -0.02
COL5A1-206ENST00000465877 CYP46A1Q9Y6A2 500 aa14.92□□□□□ -0.02
COL5A1-206ENST00000465877 EIF5BO60841 1220 aaKnown RBP14.91□□□□□ -0.02
COL5A1-206ENST00000465877 METAP2P50579 478 aaKnown RBP eCLIP14.91□□□□□ -0.02
COL5A1-206ENST00000465877 CCDC82Q8N4S0 544 aa14.91□□□□□ -0.02
COL5A1-206ENST00000465877 TAAR1Q96RJ0 339 aa14.91□□□□□ -0.02
COL5A1-206ENST00000465877 RMDN3Q96TC7 470 aa14.91□□□□□ -0.02
COL5A1-206ENST00000465877 UPF3BQ9BZI7 483 aaKnown RBP14.91□□□□□ -0.02
COL5A1-206ENST00000465877 TM6SF1Q9BZW5 370 aa14.91□□□□□ -0.02
COL5A1-206ENST00000465877 hCG_1642624A0A1W2PR95 340 aa14.9□□□□□ -0.02
COL5A1-206ENST00000465877 MYADML2A6NDP7 307 aa14.9□□□□□ -0.02
COL5A1-206ENST00000465877 C6orf222P0C671 652 aaPredicted RBP14.9□□□□□ -0.02
COL5A1-206ENST00000465877 EIF2AK2P19525 551 aaKnown RBP14.9□□□□□ -0.02
COL5A1-206ENST00000465877 CDC27P30260 824 aa14.9□□□□□ -0.02
COL5A1-206ENST00000465877 HOXA13P31271 388 aaPredicted RBP14.9□□□□□ -0.02
COL5A1-206ENST00000465877 ANAPC15P60006 121 aa14.9□□□□□ -0.02
COL5A1-206ENST00000465877 TNFAIP2Q03169 654 aa14.9□□□□□ -0.02
COL5A1-206ENST00000465877 TAPT1Q6NXT6 567 aa14.9□□□□□ -0.02
COL5A1-206ENST00000465877 TLK2Q86UE8 772 aa14.9□□□□□ -0.02
COL5A1-206ENST00000465877 NSUN6Q8TEA1 469 aaKnown RBP14.9□□□□□ -0.02
COL5A1-206ENST00000465877 DPF3Q92784 378 aa14.9□□□□□ -0.02
COL5A1-206ENST00000465877 SENP6Q9GZR1 1112 aaPredicted RBP14.9□□□□□ -0.02
COL5A1-206ENST00000465877 UPF3AQ9H1J1 476 aaKnown RBP14.9□□□□□ -0.02
COL5A1-206ENST00000465877 PXMP2Q9NR77 195 aa14.9□□□□□ -0.02
COL5A1-206ENST00000465877 PDGFCQ9NRA1 345 aa14.9□□□□□ -0.02
COL5A1-206ENST00000465877 MAP3K20Q9NYL2 800 aaKnown RBP14.9□□□□□ -0.02
COL5A1-206ENST00000465877 FRMPD4Q14CM0 1322 aa14.9□□□□□ -0.02
COL5A1-206ENST00000465877 B4DLN1 442 aa14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms