RNA–Protein interactions for RNA: ENST00000465860.5

EXOSC3-204, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 509 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-204ENST00000465860 PXDNLA1KZ92 1463 aa6.28□□□□□ -1.4
EXOSC3-204ENST00000465860 GIPC1O14908 333 aa6.28□□□□□ -1.4
EXOSC3-204ENST00000465860 CAMTA2O94983 1202 aa6.28□□□□□ -1.4
EXOSC3-204ENST00000465860 PAPLNO95428 1278 aa6.28□□□□□ -1.4
EXOSC3-204ENST00000465860 ANXA1P04083 346 aa6.28□□□□□ -1.4
EXOSC3-204ENST00000465860 CEACAM5P06731 702 aa6.28□□□□□ -1.4
EXOSC3-204ENST00000465860 CELA3AP09093 270 aa6.28□□□□□ -1.4
EXOSC3-204ENST00000465860 SNRPA1P09661 255 aaKnown RBP6.28□□□□□ -1.4
EXOSC3-204ENST00000465860 PRKCQQ04759 706 aa6.28□□□□□ -1.4
EXOSC3-204ENST00000465860 RING1Q06587 406 aa6.28□□□□□ -1.4
EXOSC3-204ENST00000465860 KCNA1Q09470 495 aa6.28□□□□□ -1.4
EXOSC3-204ENST00000465860 NFIXQ14938 502 aa6.28□□□□□ -1.4
EXOSC3-204ENST00000465860 IFI16Q16666 785 aaKnown RBP6.28□□□□□ -1.4
EXOSC3-204ENST00000465860 PROSER3Q2NL68 480 aa6.28□□□□□ -1.4
EXOSC3-204ENST00000465860 TBC1D9BQ66K14 1250 aa6.28□□□□□ -1.4
EXOSC3-204ENST00000465860 OGFOD2Q6N063 350 aa6.28□□□□□ -1.4
EXOSC3-204ENST00000465860 LLGL2Q6P1M3 1020 aa6.28□□□□□ -1.4
EXOSC3-204ENST00000465860 FAM214BQ7L5A3 538 aa6.28□□□□□ -1.4
EXOSC3-204ENST00000465860 ARFGEF1Q9Y6D6 1849 aa6.27□□□□□ -1.41
EXOSC3-204ENST00000465860 A0A0G2JLW4 131 aa6.27□□□□□ -1.41
EXOSC3-204ENST00000465860 CHL1O00533 1208 aa6.27□□□□□ -1.41
EXOSC3-204ENST00000465860 STARD3NLO95772 234 aa6.27□□□□□ -1.41
EXOSC3-204ENST00000465860 KCNA3P22001 575 aa6.27□□□□□ -1.41
EXOSC3-204ENST00000465860 FUT4P22083 530 aa6.27□□□□□ -1.41
EXOSC3-204ENST00000465860 ATP2B2Q01814 1243 aa6.27□□□□□ -1.41
EXOSC3-204ENST00000465860 HLFQ16534 295 aa6.27□□□□□ -1.41
EXOSC3-204ENST00000465860 AOC3Q16853 763 aa6.27□□□□□ -1.41
EXOSC3-204ENST00000465860 ARHGAP27Q6ZUM4 889 aa6.27□□□□□ -1.41
EXOSC3-204ENST00000465860 LRP10Q7Z4F1 713 aa6.27□□□□□ -1.41
EXOSC3-204ENST00000465860 NLGN1Q8N2Q7 840 aa6.27□□□□□ -1.41
EXOSC3-204ENST00000465860 PNNQ9H307 717 aaKnown RBP6.27□□□□□ -1.41
EXOSC3-204ENST00000465860 C12orf49Q9H741 205 aa6.27□□□□□ -1.41
EXOSC3-204ENST00000465860 MRS2Q9HD23 443 aa6.27□□□□□ -1.41
EXOSC3-204ENST00000465860 TSPYL4Q9UJ04 414 aa6.27□□□□□ -1.41
EXOSC3-204ENST00000465860 ADAMTS6Q9UKP5 1117 aa6.27□□□□□ -1.41
EXOSC3-204ENST00000465860 PCDHA4Q9UN74 947 aa6.27□□□□□ -1.41
EXOSC3-204ENST00000465860 LAS1LQ9Y4W2 734 aaKnown RBP6.27□□□□□ -1.41
EXOSC3-204ENST00000465860 CD2APQ9Y5K6 639 aa6.27□□□□□ -1.41
EXOSC3-204ENST00000465860 CCDC88AQ3V6T2 1871 aa6.27□□□□□ -1.41
EXOSC3-204ENST00000465860 TNRC6CQ9HCJ0 1690 aaKnown RBP6.26□□□□□ -1.41
EXOSC3-204ENST00000465860 ANKRD36CQ5JPF3 1778 aa6.26□□□□□ -1.41
EXOSC3-204ENST00000465860 SBF1O95248 1867 aa6.26□□□□□ -1.41
EXOSC3-204ENST00000465860 ANP32CO43423 234 aa6.26□□□□□ -1.41
EXOSC3-204ENST00000465860 P4HBP07237 508 aaKnown RBP6.26□□□□□ -1.41
EXOSC3-204ENST00000465860 USP17L7P0C7H9 530 aa6.26□□□□□ -1.41
EXOSC3-204ENST00000465860 ZNF853P0CG23 659 aa6.26□□□□□ -1.41
EXOSC3-204ENST00000465860 MYL6BP14649 208 aa6.26□□□□□ -1.41
EXOSC3-204ENST00000465860 DPEP1P16444 411 aa6.26□□□□□ -1.41
EXOSC3-204ENST00000465860 ITIH2P19823 946 aa6.26□□□□□ -1.41
EXOSC3-204ENST00000465860 HMGB2P26583 209 aaKnown RBP6.26□□□□□ -1.41
EXOSC3-204ENST00000465860 CHRNA5P30532 468 aa6.26□□□□□ -1.41
EXOSC3-204ENST00000465860 IL6STP40189 918 aaPredicted RBP6.26□□□□□ -1.41
EXOSC3-204ENST00000465860 LRRC14Q15048 493 aa6.26□□□□□ -1.41
EXOSC3-204ENST00000465860 GPR162Q16538 588 aa6.26□□□□□ -1.41
EXOSC3-204ENST00000465860 ZBTB37Q5TC79 503 aa6.26□□□□□ -1.41
EXOSC3-204ENST00000465860 PCNX4Q63HM2 1172 aa6.26□□□□□ -1.41
EXOSC3-204ENST00000465860 TTLL7Q6ZT98 887 aa6.26□□□□□ -1.41
EXOSC3-204ENST00000465860 NGEFQ8N5V2 710 aa6.26□□□□□ -1.41
EXOSC3-204ENST00000465860 HRASLS5Q96KN8 279 aa6.26□□□□□ -1.41
EXOSC3-204ENST00000465860 TEX13AQ9BXU3 409 aaPredicted RBP6.26□□□□□ -1.41
EXOSC3-204ENST00000465860 TNKS2Q9H2K2 1166 aa6.26□□□□□ -1.41
EXOSC3-204ENST00000465860 PRDM10Q9NQV6 1147 aa6.26□□□□□ -1.41
EXOSC3-204ENST00000465860 PICK1Q9NRD5 415 aa6.26□□□□□ -1.41
EXOSC3-204ENST00000465860 MBNL3Q9NUK0 354 aaKnown RBP6.26□□□□□ -1.41
EXOSC3-204ENST00000465860 FAM8A1Q9UBU6 413 aa6.26□□□□□ -1.41
EXOSC3-204ENST00000465860 LAMB2P55268 1798 aa6.26□□□□□ -1.41
EXOSC3-204ENST00000465860 TAF1P21675 1872 aa6.26□□□□□ -1.41
EXOSC3-204ENST00000465860 SLX4Q8IY92 1834 aa6.25□□□□□ -1.41
EXOSC3-204ENST00000465860 TMEM265A0A087WTH1 108 aa6.25□□□□□ -1.41
EXOSC3-204ENST00000465860 FANCGO15287 622 aa6.25□□□□□ -1.41
EXOSC3-204ENST00000465860 SERPINB2P05120 415 aa6.25□□□□□ -1.41
EXOSC3-204ENST00000465860 RNASE1P07998 156 aaKnown RBP6.25□□□□□ -1.41
EXOSC3-204ENST00000465860 EIF2S2P20042 333 aaKnown RBP6.25□□□□□ -1.41
EXOSC3-204ENST00000465860 PTPN11Q06124 597 aaPredicted RBP6.25□□□□□ -1.41
EXOSC3-204ENST00000465860 INPP5AQ14642 412 aa6.25□□□□□ -1.41
EXOSC3-204ENST00000465860 ZNF428Q96B54 188 aa6.25□□□□□ -1.41
EXOSC3-204ENST00000465860 RC3H2Q9HBD1 1191 aaKnown RBP6.25□□□□□ -1.41
EXOSC3-204ENST00000465860 CYP8B1Q9UNU6 501 aa6.25□□□□□ -1.41
EXOSC3-204ENST00000465860 ARFGEF2Q9Y6D5 1785 aa6.25□□□□□ -1.41
EXOSC3-204ENST00000465860 ELL2O00472 640 aaPredicted RBP6.24□□□□□ -1.41
EXOSC3-204ENST00000465860 LMOD3Q0VAK6 560 aa6.24□□□□□ -1.41
EXOSC3-204ENST00000465860 SCARA3Q6AZY7 606 aa6.24□□□□□ -1.41
EXOSC3-204ENST00000465860 PRR5LQ6MZQ0 368 aa6.24□□□□□ -1.41
EXOSC3-204ENST00000465860 LRFN4Q6PJG9 635 aa6.24□□□□□ -1.41
EXOSC3-204ENST00000465860 FAM9BQ8IZU0 186 aa6.24□□□□□ -1.41
EXOSC3-204ENST00000465860 TSPYL6Q8N831 410 aa6.24□□□□□ -1.41
EXOSC3-204ENST00000465860 C8orf58Q8NAV2 365 aa6.24□□□□□ -1.41
EXOSC3-204ENST00000465860 TSR2Q969E8 191 aaKnown RBP6.24□□□□□ -1.41
EXOSC3-204ENST00000465860 ELMO3Q96BJ8 720 aa6.24□□□□□ -1.41
EXOSC3-204ENST00000465860 UBN2Q6ZU65 1347 aa6.24□□□□□ -1.41
EXOSC3-204ENST00000465860 COL4A1P02462 1669 aa6.23□□□□□ -1.41
EXOSC3-204ENST00000465860 A0A087WZG4 1122 aa6.23□□□□□ -1.41
EXOSC3-204ENST00000465860 IGF2BP3O00425 579 aaKnown RBP eCLIP6.23□□□□□ -1.41
EXOSC3-204ENST00000465860 EOMESO95936 686 aa6.23□□□□□ -1.41
EXOSC3-204ENST00000465860 LDHBP07195 334 aaKnown RBP6.23□□□□□ -1.41
EXOSC3-204ENST00000465860 YY1P25490 414 aa6.23□□□□□ -1.41
EXOSC3-204ENST00000465860 TGFB2P61812 414 aa6.23□□□□□ -1.41
EXOSC3-204ENST00000465860 CDC37L1Q7L3B6 337 aa6.23□□□□□ -1.41
EXOSC3-204ENST00000465860 ARMCX6Q7L4S7 300 aa6.23□□□□□ -1.41
EXOSC3-204ENST00000465860 SPACA3Q8IXA5 215 aa6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms