RNA–Protein interactions for RNA: ENST00000465601.1

CHPF2-202, Transcript of chondroitin polymerizing factor 2, humanhuman

TSL 3

Gene CHPF2, Length 782 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPF2-202ENST00000465601 PPP2R5BQ15173 497 aa14.32□□□□□ -0.12
CHPF2-202ENST00000465601 MAMDC4Q6UXC1 1216 aa14.32□□□□□ -0.12
CHPF2-202ENST00000465601 ZNF467Q7Z7K2 595 aaPredicted RBP14.32□□□□□ -0.12
CHPF2-202ENST00000465601 MCF2L2Q86YR7 1114 aa14.32□□□□□ -0.12
CHPF2-202ENST00000465601 ALDH8A1Q9H2A2 487 aaPredicted RBP14.32□□□□□ -0.12
CHPF2-202ENST00000465601 NCOA5Q9HCD5 579 aaKnown RBP14.32□□□□□ -0.12
CHPF2-202ENST00000465601 PAK6Q9NQU5 681 aaPredicted RBP14.32□□□□□ -0.12
CHPF2-202ENST00000465601 V9GY48 417 aaPredicted RBP14.32□□□□□ -0.12
CHPF2-202ENST00000465601 ASTN1O14525 1302 aa14.32□□□□□ -0.12
CHPF2-202ENST00000465601 CNTNAP5Q8WYK1 1306 aa14.32□□□□□ -0.12
CHPF2-202ENST00000465601 PDE4DIPQ5VU43 2346 aa14.31□□□□□ -0.12
CHPF2-202ENST00000465601 CFBP00751 764 aa14.31□□□□□ -0.12
CHPF2-202ENST00000465601 CYBAP13498 195 aa14.31□□□□□ -0.12
CHPF2-202ENST00000465601 AK2P54819 239 aa14.31□□□□□ -0.12
CHPF2-202ENST00000465601 STK3Q13188 491 aa14.31□□□□□ -0.12
CHPF2-202ENST00000465601 NOL8Q76FK4 1167 aaKnown RBP14.31□□□□□ -0.12
CHPF2-202ENST00000465601 ARMCX2Q7L311 632 aa14.31□□□□□ -0.12
CHPF2-202ENST00000465601 MSL3Q8N5Y2 521 aaKnown RBP14.31□□□□□ -0.12
CHPF2-202ENST00000465601 SYTL5Q8TDW5 730 aaPredicted RBP14.31□□□□□ -0.12
CHPF2-202ENST00000465601 ZNF274Q96GC6 653 aaPredicted RBP14.31□□□□□ -0.12
CHPF2-202ENST00000465601 KIF2CQ99661 725 aa14.31□□□□□ -0.12
CHPF2-202ENST00000465601 UPF2Q9HAU5 1272 aaKnown RBP14.31□□□□□ -0.12
CHPF2-202ENST00000465601 CDKN2AIPQ9NXV6 580 aaPredicted RBP14.31□□□□□ -0.12
CHPF2-202ENST00000465601 TPCN1Q9ULQ1 816 aa14.31□□□□□ -0.12
CHPF2-202ENST00000465601 RBBP6Q7Z6E9 1792 aaKnown RBP14.3□□□□□ -0.12
CHPF2-202ENST00000465601 ASB14A6NK59 587 aa14.3□□□□□ -0.12
CHPF2-202ENST00000465601 PPFIA3O75145 1194 aa14.3□□□□□ -0.12
CHPF2-202ENST00000465601 SGPL1O95470 568 aa14.3□□□□□ -0.12
CHPF2-202ENST00000465601 TFRCP02786 760 aaKnown RBP14.3□□□□□ -0.12
CHPF2-202ENST00000465601 GJA8P48165 433 aa14.3□□□□□ -0.12
CHPF2-202ENST00000465601 RBM25P49756 843 aaKnown RBP14.3□□□□□ -0.12
CHPF2-202ENST00000465601 U2AF1L4Q8WU68 220 aaKnown RBP14.3□□□□□ -0.12
CHPF2-202ENST00000465601 TAAR1Q96RJ0 339 aa14.3□□□□□ -0.12
CHPF2-202ENST00000465601 BACH2Q9BYV9 841 aa14.3□□□□□ -0.12
CHPF2-202ENST00000465601 COL20A1Q9P218 1284 aa14.3□□□□□ -0.12
CHPF2-202ENST00000465601 ADD3Q9UEY8 706 aaKnown RBP14.3□□□□□ -0.12
CHPF2-202ENST00000465601 CNPY2Q9Y2B0 182 aa14.3□□□□□ -0.12
CHPF2-202ENST00000465601 SYNGAP1Q96PV0 1343 aa14.3□□□□□ -0.12
CHPF2-202ENST00000465601 NID2Q14112 1375 aa14.3□□□□□ -0.12
CHPF2-202ENST00000465601 ZNF865P0CJ78 1059 aaPredicted RBP14.29□□□□□ -0.12
CHPF2-202ENST00000465601 HOXA13P31271 388 aaPredicted RBP14.29□□□□□ -0.12
CHPF2-202ENST00000465601 ALDH5A1P51649 535 aaPredicted RBP14.29□□□□□ -0.12
CHPF2-202ENST00000465601 HSD17B4P51659 736 aa14.29□□□□□ -0.12
CHPF2-202ENST00000465601 ANKRD1Q15327 319 aa14.29□□□□□ -0.12
CHPF2-202ENST00000465601 NTRK3Q16288 839 aa14.29□□□□□ -0.12
CHPF2-202ENST00000465601 ANO1Q5XXA6 986 aa14.29□□□□□ -0.12
CHPF2-202ENST00000465601 HEATR3Q7Z4Q2 680 aa14.29□□□□□ -0.12
CHPF2-202ENST00000465601 GPKOWQ92917 476 aaPredicted RBP eCLIP14.29□□□□□ -0.12
CHPF2-202ENST00000465601 PHKBQ93100 1093 aa14.29□□□□□ -0.12
CHPF2-202ENST00000465601 MAF1Q9H063 256 aa14.29□□□□□ -0.12
CHPF2-202ENST00000465601 NRBP1Q9UHY1 535 aa14.29□□□□□ -0.12
CHPF2-202ENST00000465601 ZHX1Q9UKY1 873 aaPredicted RBP14.29□□□□□ -0.12
CHPF2-202ENST00000465601 MKI67P46013 3256 aaKnown RBP14.29□□□□□ -0.12
CHPF2-202ENST00000465601 GCOM1H8Y6P7 765 aaPredicted RBP14.28□□□□□ -0.12
CHPF2-202ENST00000465601 SEPT4O43236 478 aa14.28□□□□□ -0.12
CHPF2-202ENST00000465601 POLR2MP0CAP2 368 aa14.28□□□□□ -0.12
CHPF2-202ENST00000465601 ACVR2BQ13705 512 aa14.28□□□□□ -0.12
CHPF2-202ENST00000465601 LHX8Q68G74 356 aa14.28□□□□□ -0.12
CHPF2-202ENST00000465601 WWC2Q6AWC2 1192 aa14.28□□□□□ -0.12
CHPF2-202ENST00000465601 EEPD1Q7L9B9 569 aa14.28□□□□□ -0.12
CHPF2-202ENST00000465601 DNERQ8NFT8 737 aa14.28□□□□□ -0.12
CHPF2-202ENST00000465601 SHISA4Q96DD7 197 aa14.28□□□□□ -0.12
CHPF2-202ENST00000465601 RMDN3Q96TC7 470 aa14.28□□□□□ -0.12
CHPF2-202ENST00000465601 SLC26A6Q9BXS9 759 aa14.28□□□□□ -0.12
CHPF2-202ENST00000465601 CRISPLD2Q9H0B8 497 aa14.28□□□□□ -0.12
CHPF2-202ENST00000465601 SLKQ9H2G2 1235 aaPredicted RBP14.28□□□□□ -0.12
CHPF2-202ENST00000465601 ABHD16BQ9H3Z7 469 aa14.28□□□□□ -0.12
CHPF2-202ENST00000465601 DDX20Q9UHI6 824 aaKnown RBP14.28□□□□□ -0.12
CHPF2-202ENST00000465601 CPLX1O14810 134 aa14.27□□□□□ -0.13
CHPF2-202ENST00000465601 PRPF3O43395 683 aaKnown RBP14.27□□□□□ -0.13
CHPF2-202ENST00000465601 PFKFB2O60825 505 aa14.27□□□□□ -0.13
CHPF2-202ENST00000465601 IFNAR1P17181 557 aa14.27□□□□□ -0.13
CHPF2-202ENST00000465601 AKAP17AQ02040 695 aaKnown RBP14.27□□□□□ -0.13
CHPF2-202ENST00000465601 GHRHRQ02643 423 aa14.27□□□□□ -0.13
CHPF2-202ENST00000465601 SCRN1Q12765 414 aa14.27□□□□□ -0.13
CHPF2-202ENST00000465601 FCHSD1Q86WN1 690 aa14.27□□□□□ -0.13
CHPF2-202ENST00000465601 SAMD3Q8N6K7 520 aa14.27□□□□□ -0.13
CHPF2-202ENST00000465601 MORC4Q8TE76 937 aa14.27□□□□□ -0.13
CHPF2-202ENST00000465601 NSUN6Q8TEA1 469 aaKnown RBP14.27□□□□□ -0.13
CHPF2-202ENST00000465601 KATNBL1Q9H079 304 aa14.27□□□□□ -0.13
CHPF2-202ENST00000465601 MAP3K20Q9NYL2 800 aaKnown RBP14.27□□□□□ -0.13
CHPF2-202ENST00000465601 CEP290O15078 2479 aa14.27□□□□□ -0.13
CHPF2-202ENST00000465601 FRMPD3Q5JV73 1810 aa14.27□□□□□ -0.13
CHPF2-202ENST00000465601 MSCO60682 206 aa14.26□□□□□ -0.13
CHPF2-202ENST00000465601 DTNBO60941 627 aa14.26□□□□□ -0.13
CHPF2-202ENST00000465601 LARGE1O95461 756 aa14.26□□□□□ -0.13
CHPF2-202ENST00000465601 EIF2AK2P19525 551 aaKnown RBP14.26□□□□□ -0.13
CHPF2-202ENST00000465601 RGS19P49795 217 aa14.26□□□□□ -0.13
CHPF2-202ENST00000465601 NAPAP54920 295 aa14.26□□□□□ -0.13
CHPF2-202ENST00000465601 PDE4DQ08499 809 aa14.26□□□□□ -0.13
CHPF2-202ENST00000465601 PKN1Q16512 942 aa14.26□□□□□ -0.13
CHPF2-202ENST00000465601 ME3Q16798 604 aa14.26□□□□□ -0.13
CHPF2-202ENST00000465601 PFKFB3Q16875 520 aaPredicted RBP14.26□□□□□ -0.13
CHPF2-202ENST00000465601 CCDC144BQ3MJ40 725 aa14.26□□□□□ -0.13
CHPF2-202ENST00000465601 ARHGEF16Q5VV41 709 aa14.26□□□□□ -0.13
CHPF2-202ENST00000465601 TYW1BQ6NUM6 668 aa14.26□□□□□ -0.13
CHPF2-202ENST00000465601 USP17L6PQ6QN14 398 aa14.26□□□□□ -0.13
CHPF2-202ENST00000465601 FBXO16Q8IX29 292 aaPredicted RBP14.26□□□□□ -0.13
CHPF2-202ENST00000465601 NECAB1Q8N987 351 aa14.26□□□□□ -0.13
CHPF2-202ENST00000465601 CUL5Q93034 780 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 395 ms