RNA–Protein interactions for RNA: ENST00000465421.5

SIK3-207, Transcript of SIK family kinase 3, humanhuman

TSL 2

Gene SIK3, Length 3,459 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-207ENST00000465421 LRRC24Q50LG9 513 aa7.2□□□□□ -1.26
SIK3-207ENST00000465421 RNF187Q5TA31 235 aaPredicted RBP7.2□□□□□ -1.26
SIK3-207ENST00000465421 CCDC70Q6NSX1 233 aa7.2□□□□□ -1.26
SIK3-207ENST00000465421 MB21D1Q8N884 522 aa7.2□□□□□ -1.26
SIK3-207ENST00000465421 SLC26A6Q9BXS9 759 aa7.2□□□□□ -1.26
SIK3-207ENST00000465421 SLC24A3Q9HC58 644 aa7.2□□□□□ -1.26
SIK3-207ENST00000465421 TBC1D2BQ9UPU7 963 aa7.2□□□□□ -1.26
SIK3-207ENST00000465421 XDHP47989 1333 aa7.19□□□□□ -1.26
SIK3-207ENST00000465421 C5orf60A6NFR6 353 aa7.19□□□□□ -1.26
SIK3-207ENST00000465421 ZNF263O14978 683 aa7.19□□□□□ -1.26
SIK3-207ENST00000465421 COQ9O75208 318 aa7.19□□□□□ -1.26
SIK3-207ENST00000465421 ADAMTS2O95450 1211 aa7.19□□□□□ -1.26
SIK3-207ENST00000465421 FAM153BP0C7A2 387 aa7.19□□□□□ -1.26
SIK3-207ENST00000465421 FGFR2P21802 821 aa7.19□□□□□ -1.26
SIK3-207ENST00000465421 UBXN1Q04323 297 aa7.19□□□□□ -1.26
SIK3-207ENST00000465421 CTDSPL2Q05D32 466 aa7.19□□□□□ -1.26
SIK3-207ENST00000465421 KCTD19Q17RG1 926 aaPredicted RBP7.19□□□□□ -1.26
SIK3-207ENST00000465421 FAM153CQ494X1 144 aa7.19□□□□□ -1.26
SIK3-207ENST00000465421 ZNF772Q68DY9 489 aaPredicted RBP7.19□□□□□ -1.26
SIK3-207ENST00000465421 CDCA2Q69YH5 1023 aaPredicted RBP7.19□□□□□ -1.26
SIK3-207ENST00000465421 RCSD1Q6JBY9 416 aa7.19□□□□□ -1.26
SIK3-207ENST00000465421 NLRP10Q86W26 655 aa7.19□□□□□ -1.26
SIK3-207ENST00000465421 TATDN2Q93075 761 aa7.19□□□□□ -1.26
SIK3-207ENST00000465421 ATP6V1G3Q96LB4 118 aa7.19□□□□□ -1.26
SIK3-207ENST00000465421 RBM28Q9NW13 759 aaKnown RBP7.19□□□□□ -1.26
SIK3-207ENST00000465421 FAM153AQ9UHL3 310 aa7.19□□□□□ -1.26
SIK3-207ENST00000465421 USP21Q9UK80 565 aa7.19□□□□□ -1.26
SIK3-207ENST00000465421 DUOX1Q9NRD9 1551 aa7.19□□□□□ -1.26
SIK3-207ENST00000465421 PDS5AQ29RF7 1337 aaKnown RBP7.19□□□□□ -1.26
SIK3-207ENST00000465421 A0A1B0GUA9 196 aa7.19□□□□□ -1.26
SIK3-207ENST00000465421 NUTM2BA6NNL0 878 aaPredicted RBP7.19□□□□□ -1.26
SIK3-207ENST00000465421 NUTM2EB1AL46 878 aaPredicted RBP7.19□□□□□ -1.26
SIK3-207ENST00000465421 ZBTB43O43298 467 aa7.19□□□□□ -1.26
SIK3-207ENST00000465421 IFNAR1P17181 557 aa7.19□□□□□ -1.26
SIK3-207ENST00000465421 IL6STP40189 918 aaPredicted RBP7.19□□□□□ -1.26
SIK3-207ENST00000465421 ICA1Q05084 483 aa7.19□□□□□ -1.26
SIK3-207ENST00000465421 NR5A1Q13285 461 aa7.19□□□□□ -1.26
SIK3-207ENST00000465421 GLE1Q53GS7 698 aaKnown RBP7.19□□□□□ -1.26
SIK3-207ENST00000465421 TAX1BP1Q86VP1 789 aa7.19□□□□□ -1.26
SIK3-207ENST00000465421 CCDC170Q8IYT3 715 aa7.19□□□□□ -1.26
SIK3-207ENST00000465421 NUP133Q8WUM0 1156 aa7.19□□□□□ -1.26
SIK3-207ENST00000465421 TMEM87BQ96K49 555 aa7.19□□□□□ -1.26
SIK3-207ENST00000465421 RUFY1Q96T51 708 aa7.19□□□□□ -1.26
SIK3-207ENST00000465421 PSMB7Q99436 277 aa7.19□□□□□ -1.26
SIK3-207ENST00000465421 SLX1AQ9BQ83 275 aa7.19□□□□□ -1.26
SIK3-207ENST00000465421 PUS3Q9BZE2 481 aaKnown RBP7.19□□□□□ -1.26
SIK3-207ENST00000465421 ZBTB3Q9H5J0 574 aa7.19□□□□□ -1.26
SIK3-207ENST00000465421 JADE2Q9NQC1 790 aa7.19□□□□□ -1.26
SIK3-207ENST00000465421 HAUS2Q9NVX0 235 aa7.19□□□□□ -1.26
SIK3-207ENST00000465421 CEP131Q9UPN4 1083 aa7.19□□□□□ -1.26
SIK3-207ENST00000465421 LUC7L2Q9Y383 392 aaKnown RBP7.19□□□□□ -1.26
SIK3-207ENST00000465421 RGPD3A6NKT7 1758 aaPredicted RBP7.19□□□□□ -1.26
SIK3-207ENST00000465421 RGPD4Q7Z3J3 1758 aa7.19□□□□□ -1.26
SIK3-207ENST00000465421 LGALS16A8MUM7 142 aa7.18□□□□□ -1.26
SIK3-207ENST00000465421 CALRP27797 417 aaKnown RBP7.18□□□□□ -1.26
SIK3-207ENST00000465421 SLC8A1P32418 973 aa7.18□□□□□ -1.26
SIK3-207ENST00000465421 CDR1P51861 262 aa7.18□□□□□ -1.26
SIK3-207ENST00000465421 CLNS1AP54105 237 aaKnown RBP7.18□□□□□ -1.26
SIK3-207ENST00000465421 CDK17Q00537 523 aa7.18□□□□□ -1.26
SIK3-207ENST00000465421 SSRP1Q08945 709 aaKnown RBP7.18□□□□□ -1.26
SIK3-207ENST00000465421 DDB1Q16531 1140 aa7.18□□□□□ -1.26
SIK3-207ENST00000465421 CEP57Q86XR8 500 aa7.18□□□□□ -1.26
SIK3-207ENST00000465421 LSM14AQ8ND56 463 aaKnown RBP7.18□□□□□ -1.26
SIK3-207ENST00000465421 RASSF8Q8NHQ8 419 aa7.18□□□□□ -1.26
SIK3-207ENST00000465421 OXER1Q8TDS5 423 aa7.18□□□□□ -1.26
SIK3-207ENST00000465421 APPBP2Q92624 585 aa7.18□□□□□ -1.26
SIK3-207ENST00000465421 SYMPKQ92797 1274 aaKnown RBP7.18□□□□□ -1.26
SIK3-207ENST00000465421 SHISA4Q96DD7 197 aa7.18□□□□□ -1.26
SIK3-207ENST00000465421 OSBPL9Q96SU4 736 aa7.18□□□□□ -1.26
SIK3-207ENST00000465421 MTRQ99707 1265 aa7.18□□□□□ -1.26
SIK3-207ENST00000465421 NHEJ1Q9H9Q4 299 aaPredicted RBP7.18□□□□□ -1.26
SIK3-207ENST00000465421 EBF2Q9HAK2 575 aa7.18□□□□□ -1.26
SIK3-207ENST00000465421 SLC12A6Q9UHW9 1150 aa7.18□□□□□ -1.26
SIK3-207ENST00000465421 CAPN6Q9Y6Q1 641 aa7.18□□□□□ -1.26
SIK3-207ENST00000465421 BTAF1O14981 1849 aa7.18□□□□□ -1.26
SIK3-207ENST00000465421 GOLGA8AA7E2F4 631 aa7.18□□□□□ -1.26
SIK3-207ENST00000465421 HMGB1P1B2RPK0 211 aaPredicted RBP7.18□□□□□ -1.26
SIK3-207ENST00000465421 B4E1Z4 1266 aa7.18□□□□□ -1.26
SIK3-207ENST00000465421 OPLAHO14841 1288 aa7.18□□□□□ -1.26
SIK3-207ENST00000465421 TRAPPC3O43617 180 aa7.18□□□□□ -1.26
SIK3-207ENST00000465421 IDH1O75874 414 aaKnown RBP7.18□□□□□ -1.26
SIK3-207ENST00000465421 DNAJC8O75937 253 aaPredicted RBP7.18□□□□□ -1.26
SIK3-207ENST00000465421 EZRP15311 586 aaKnown RBP7.18□□□□□ -1.26
SIK3-207ENST00000465421 SCTRP47872 440 aa7.18□□□□□ -1.26
SIK3-207ENST00000465421 VAV2P52735 878 aa7.18□□□□□ -1.26
SIK3-207ENST00000465421 IFFO1Q0D2I5 559 aa7.18□□□□□ -1.26
SIK3-207ENST00000465421 SF3A3Q12874 501 aaKnown RBP eCLIP7.18□□□□□ -1.26
SIK3-207ENST00000465421 PAK1Q13153 545 aa7.18□□□□□ -1.26
SIK3-207ENST00000465421 QPCTQ16769 361 aa7.18□□□□□ -1.26
SIK3-207ENST00000465421 KIF6Q6ZMV9 814 aa7.18□□□□□ -1.26
SIK3-207ENST00000465421 KIAA1328Q86T90 577 aa7.18□□□□□ -1.26
SIK3-207ENST00000465421 TRIM58Q8NG06 486 aa7.18□□□□□ -1.26
SIK3-207ENST00000465421 CCDC114Q96M63 670 aa7.18□□□□□ -1.26
SIK3-207ENST00000465421 CCDC43Q96MW1 224 aaKnown RBP7.18□□□□□ -1.26
SIK3-207ENST00000465421 CENPHQ9H3R5 247 aa7.18□□□□□ -1.26
SIK3-207ENST00000465421 VPS54Q9P1Q0 977 aa7.18□□□□□ -1.26
SIK3-207ENST00000465421 EPB41L3Q9Y2J2 1087 aaPredicted RBP7.18□□□□□ -1.26
SIK3-207ENST00000465421 GOLGA6L7A0A1B0GV03 622 aa7.18□□□□□ -1.26
SIK3-207ENST00000465421 E7EVH7 732 aa7.18□□□□□ -1.26
SIK3-207ENST00000465421 GPAA1O43292 621 aa7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms