RNA–Protein interactions for RNA: ENST00000465339.5

COL28A1-206, Transcript of collagen type XXVIII alpha 1 chain, humanhuman

TSL 3

Gene COL28A1, Length 722 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL28A1-206ENST00000465339 BAZ2BQ9UIF8 2168 aaKnown RBP15.15■□□□□ 0.02
COL28A1-206ENST00000465339 BRCA2P51587 3418 aa15.15■□□□□ 0.02
COL28A1-206ENST00000465339 PTPDC1A2A3K4 754 aa15.15■□□□□ 0.02
COL28A1-206ENST00000465339 NFIBO00712 420 aa15.15■□□□□ 0.02
COL28A1-206ENST00000465339 ZBTB5O15062 677 aa15.15■□□□□ 0.02
COL28A1-206ENST00000465339 AKR1A1P14550 325 aa15.15■□□□□ 0.02
COL28A1-206ENST00000465339 GNAQP50148 359 aa15.15■□□□□ 0.02
COL28A1-206ENST00000465339 ADCK5Q3MIX3 580 aa15.15■□□□□ 0.02
COL28A1-206ENST00000465339 USH1GQ495M9 461 aa15.15■□□□□ 0.02
COL28A1-206ENST00000465339 RNF207Q6ZRF8 634 aa15.15■□□□□ 0.02
COL28A1-206ENST00000465339 SGMS1Q86VZ5 419 aa15.15■□□□□ 0.02
COL28A1-206ENST00000465339 MCF2L2Q86YR7 1114 aa15.15■□□□□ 0.02
COL28A1-206ENST00000465339 NUP133Q8WUM0 1156 aa15.15■□□□□ 0.02
COL28A1-206ENST00000465339 LZTS2Q9BRK4 669 aa15.15■□□□□ 0.02
COL28A1-206ENST00000465339 AMNQ9BXJ7 453 aa15.15■□□□□ 0.02
COL28A1-206ENST00000465339 CDKN2AIPQ9NXV6 580 aaPredicted RBP15.15■□□□□ 0.02
COL28A1-206ENST00000465339 FAM184BQ9ULE4 1060 aa15.15■□□□□ 0.02
COL28A1-206ENST00000465339 MRPL11Q9Y3B7 192 aaKnown RBP15.15■□□□□ 0.02
COL28A1-206ENST00000465339 SLC12A7Q9Y666 1083 aa15.15■□□□□ 0.02
COL28A1-206ENST00000465339 LCTP09848 1927 aa15.14■□□□□ 0.01
COL28A1-206ENST00000465339 RARBP10826 455 aa15.14■□□□□ 0.01
COL28A1-206ENST00000465339 TAL1P17542 331 aaPredicted RBP15.14■□□□□ 0.01
COL28A1-206ENST00000465339 ACVR2BQ13705 512 aa15.14■□□□□ 0.01
COL28A1-206ENST00000465339 COL9A3Q14050 684 aaPredicted RBP15.14■□□□□ 0.01
COL28A1-206ENST00000465339 SYNE3Q6ZMZ3 975 aa15.14■□□□□ 0.01
COL28A1-206ENST00000465339 ARMCX2Q7L311 632 aa15.14■□□□□ 0.01
COL28A1-206ENST00000465339 CCDC144CPQ8IYA2 1237 aa15.14■□□□□ 0.01
COL28A1-206ENST00000465339 DPF3Q92784 378 aa15.14■□□□□ 0.01
COL28A1-206ENST00000465339 C11orf49Q9H6J7 331 aa15.14■□□□□ 0.01
COL28A1-206ENST00000465339 SNX14Q9Y5W7 946 aa15.14■□□□□ 0.01
COL28A1-206ENST00000465339 DNM1LO00429 736 aa15.13■□□□□ 0.01
COL28A1-206ENST00000465339 CALML3P27482 149 aa15.13■□□□□ 0.01
COL28A1-206ENST00000465339 PSMA5P28066 241 aa15.13■□□□□ 0.01
COL28A1-206ENST00000465339 RPS6P62753 249 aaKnown RBP15.13■□□□□ 0.01
COL28A1-206ENST00000465339 DNERQ8NFT8 737 aa15.13■□□□□ 0.01
COL28A1-206ENST00000465339 DIS3LQ8TF46 1054 aaKnown RBP15.13■□□□□ 0.01
COL28A1-206ENST00000465339 MPHOSPH6Q99547 160 aaKnown RBP15.13■□□□□ 0.01
COL28A1-206ENST00000465339 LRRC2Q9BYS8 371 aa15.13■□□□□ 0.01
COL28A1-206ENST00000465339 MAP3K20Q9NYL2 800 aaKnown RBP15.13■□□□□ 0.01
COL28A1-206ENST00000465339 ZHX1Q9UKY1 873 aaPredicted RBP15.13■□□□□ 0.01
COL28A1-206ENST00000465339 PNMA6FA0A0J9YX94 578 aa15.12■□□□□ 0.01
COL28A1-206ENST00000465339 B4DLN1 442 aa15.12■□□□□ 0.01
COL28A1-206ENST00000465339 CYTH3O43739 400 aa15.12■□□□□ 0.01
COL28A1-206ENST00000465339 EIF5BO60841 1220 aaKnown RBP15.12■□□□□ 0.01
COL28A1-206ENST00000465339 COL6A1P12109 1028 aa15.12■□□□□ 0.01
COL28A1-206ENST00000465339 MRPL12P52815 198 aaKnown RBP15.12■□□□□ 0.01
COL28A1-206ENST00000465339 PRPF38BQ5VTL8 546 aaKnown RBP15.12■□□□□ 0.01
COL28A1-206ENST00000465339 ANO1Q5XXA6 986 aa15.12■□□□□ 0.01
COL28A1-206ENST00000465339 SAMD3Q8N6K7 520 aa15.12■□□□□ 0.01
COL28A1-206ENST00000465339 FANCBQ8NB91 859 aa15.12■□□□□ 0.01
COL28A1-206ENST00000465339 MORC4Q8TE76 937 aa15.12■□□□□ 0.01
COL28A1-206ENST00000465339 JAKMIP1Q96N16 626 aaKnown RBP15.12■□□□□ 0.01
COL28A1-206ENST00000465339 PIGSQ96S52 555 aa15.12■□□□□ 0.01
COL28A1-206ENST00000465339 MYL10Q9BUA6 226 aa15.12■□□□□ 0.01
COL28A1-206ENST00000465339 SPZ1Q9BXG8 430 aa15.12■□□□□ 0.01
COL28A1-206ENST00000465339 USP26Q9BXU7 913 aa15.12■□□□□ 0.01
COL28A1-206ENST00000465339 XPNPEP3Q9NQH7 507 aa15.12■□□□□ 0.01
COL28A1-206ENST00000465339 BMP2KQ9NSY1 1161 aaPredicted RBP15.12■□□□□ 0.01
COL28A1-206ENST00000465339 PCDHA1Q9Y5I3 950 aa15.12■□□□□ 0.01
COL28A1-206ENST00000465339 ASTN1O14525 1302 aa15.12■□□□□ 0.01
COL28A1-206ENST00000465339 DUSP11O75319 330 aaKnown RBP15.11■□□□□ 0.01
COL28A1-206ENST00000465339 ALDH5A1P51649 535 aaPredicted RBP15.11■□□□□ 0.01
COL28A1-206ENST00000465339 FGD1P98174 961 aa15.11■□□□□ 0.01
COL28A1-206ENST00000465339 SLC35G1Q2M3R5 365 aa15.11■□□□□ 0.01
COL28A1-206ENST00000465339 CCDC144BQ3MJ40 725 aa15.11■□□□□ 0.01
COL28A1-206ENST00000465339 BLOC1S2Q6QNY1 142 aa15.11■□□□□ 0.01
COL28A1-206ENST00000465339 SLC30A10Q6XR72 485 aa15.11■□□□□ 0.01
COL28A1-206ENST00000465339 HOMER1Q86YM7 354 aa15.11■□□□□ 0.01
COL28A1-206ENST00000465339 RRP36Q96EU6 259 aaKnown RBP15.11■□□□□ 0.01
COL28A1-206ENST00000465339 PURBQ96QR8 312 aaKnown RBP15.11■□□□□ 0.01
COL28A1-206ENST00000465339 KATNBL1Q9H079 304 aa15.11■□□□□ 0.01
COL28A1-206ENST00000465339 NR2E3Q9Y5X4 410 aa15.11■□□□□ 0.01
COL28A1-206ENST00000465339 KBTBD13C9JR72 458 aa15.1■□□□□ 0.01
COL28A1-206ENST00000465339 EVI5O60447 810 aa15.1■□□□□ 0.01
COL28A1-206ENST00000465339 PPP1R11O60927 126 aaPredicted RBP15.1■□□□□ 0.01
COL28A1-206ENST00000465339 LRRC41Q15345 812 aa15.1■□□□□ 0.01
COL28A1-206ENST00000465339 GJC2Q5T442 439 aaPredicted RBP15.1■□□□□ 0.01
COL28A1-206ENST00000465339 APOA5Q6Q788 366 aa15.1■□□□□ 0.01
COL28A1-206ENST00000465339 RNF180Q86T96 592 aa15.1■□□□□ 0.01
COL28A1-206ENST00000465339 TBC1D5Q92609 795 aa15.1■□□□□ 0.01
COL28A1-206ENST00000465339 TCEANC2Q96MN5 208 aa15.1■□□□□ 0.01
COL28A1-206ENST00000465339 VTA1Q9NP79 307 aa15.1■□□□□ 0.01
COL28A1-206ENST00000465339 CEP290O15078 2479 aa15.09■□□□□ 0.01
COL28A1-206ENST00000465339 ZBTB43O43298 467 aa15.09■□□□□ 0.01
COL28A1-206ENST00000465339 ATMINO43313 823 aaPredicted RBP15.09■□□□□ 0.01
COL28A1-206ENST00000465339 CFBP00751 764 aa15.09■□□□□ 0.01
COL28A1-206ENST00000465339 RXRAP19793 462 aa15.09■□□□□ 0.01
COL28A1-206ENST00000465339 TIE1P35590 1138 aa15.09■□□□□ 0.01
COL28A1-206ENST00000465339 RCAN1P53805 252 aa15.09■□□□□ 0.01
COL28A1-206ENST00000465339 GHRHRQ02643 423 aa15.09■□□□□ 0.01
COL28A1-206ENST00000465339 TNFAIP2Q03169 654 aa15.09■□□□□ 0.01
COL28A1-206ENST00000465339 PPP2R5BQ15173 497 aa15.09■□□□□ 0.01
COL28A1-206ENST00000465339 IQSEC1Q6DN90 963 aa15.09■□□□□ 0.01
COL28A1-206ENST00000465339 ASTLQ6HA08 431 aaPredicted RBP15.09■□□□□ 0.01
COL28A1-206ENST00000465339 FBXL16Q8N461 479 aa15.09■□□□□ 0.01
COL28A1-206ENST00000465339 SYTL5Q8TDW5 730 aaPredicted RBP15.09■□□□□ 0.01
COL28A1-206ENST00000465339 NSUN6Q8TEA1 469 aaKnown RBP15.09■□□□□ 0.01
COL28A1-206ENST00000465339 TSEN34Q9BSV6 310 aaKnown RBP15.09■□□□□ 0.01
COL28A1-206ENST00000465339 SENP6Q9GZR1 1112 aaPredicted RBP15.09■□□□□ 0.01
COL28A1-206ENST00000465339 SPC25Q9HBM1 224 aa15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms