RNA–Protein interactions for RNA: ENST00000465074.1

XRN1-204, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 643 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-204ENST00000465074 KCNA10Q16322 511 aa14.18□□□□□ -0.14
XRN1-204ENST00000465074 GNASQ5JWF2 1037 aa14.18□□□□□ -0.14
XRN1-204ENST00000465074 RAB11FIP4Q86YS3 637 aa14.18□□□□□ -0.14
XRN1-204ENST00000465074 IGDCC4Q8TDY8 1250 aa14.18□□□□□ -0.14
XRN1-204ENST00000465074 AP5M1Q9H0R1 490 aa14.18□□□□□ -0.14
XRN1-204ENST00000465074 PRKAG2Q9UGJ0 569 aa14.18□□□□□ -0.14
XRN1-204ENST00000465074 MRPL11Q9Y3B7 192 aaKnown RBP14.18□□□□□ -0.14
XRN1-204ENST00000465074 BAZ2BQ9UIF8 2168 aaKnown RBP14.17□□□□□ -0.14
XRN1-204ENST00000465074 DYNC1LI2O43237 492 aaPredicted RBP14.17□□□□□ -0.14
XRN1-204ENST00000465074 ADAMTS4O75173 837 aa14.17□□□□□ -0.14
XRN1-204ENST00000465074 CFBP00751 764 aa14.17□□□□□ -0.14
XRN1-204ENST00000465074 ACLYP53396 1101 aa14.17□□□□□ -0.14
XRN1-204ENST00000465074 MDM2Q00987 491 aaPredicted RBP14.17□□□□□ -0.14
XRN1-204ENST00000465074 COL9A3Q14050 684 aaPredicted RBP14.17□□□□□ -0.14
XRN1-204ENST00000465074 TRIM60Q495X7 471 aa14.17□□□□□ -0.14
XRN1-204ENST00000465074 TMEM63BQ5T3F8 832 aa14.17□□□□□ -0.14
XRN1-204ENST00000465074 ZNF654Q8IZM8 581 aa14.17□□□□□ -0.14
XRN1-204ENST00000465074 CTCFLQ8NI51 663 aaPredicted RBP14.17□□□□□ -0.14
XRN1-204ENST00000465074 PIGSQ96S52 555 aa14.17□□□□□ -0.14
XRN1-204ENST00000465074 MPHOSPH6Q99547 160 aaKnown RBP14.17□□□□□ -0.14
XRN1-204ENST00000465074 AMNQ9BXJ7 453 aa14.17□□□□□ -0.14
XRN1-204ENST00000465074 KATNBL1Q9H079 304 aa14.17□□□□□ -0.14
XRN1-204ENST00000465074 LY9Q9HBG7 655 aa14.17□□□□□ -0.14
XRN1-204ENST00000465074 PHF24Q9UPV7 400 aa14.17□□□□□ -0.14
XRN1-204ENST00000465074 LRRC37A2A6NM11 1700 aa14.16□□□□□ -0.14
XRN1-204ENST00000465074 A0A1W2PQ45 241 aaPredicted RBP14.16□□□□□ -0.14
XRN1-204ENST00000465074 A0A1W2PQY0 241 aa14.16□□□□□ -0.14
XRN1-204ENST00000465074 RXRAP19793 462 aa14.16□□□□□ -0.14
XRN1-204ENST00000465074 MAGEA10P43363 369 aaPredicted RBP14.16□□□□□ -0.14
XRN1-204ENST00000465074 MCF2L2Q86YR7 1114 aa14.16□□□□□ -0.14
XRN1-204ENST00000465074 TMEM87BQ96K49 555 aa14.16□□□□□ -0.14
XRN1-204ENST00000465074 TAAR1Q96RJ0 339 aa14.16□□□□□ -0.14
XRN1-204ENST00000465074 LBHD1Q9BQE6 289 aaPredicted RBP14.16□□□□□ -0.14
XRN1-204ENST00000465074 VTA1Q9NP79 307 aa14.16□□□□□ -0.14
XRN1-204ENST00000465074 STARD7Q9NQZ5 370 aa14.16□□□□□ -0.14
XRN1-204ENST00000465074 PPP4R2Q9NY27 417 aa14.16□□□□□ -0.14
XRN1-204ENST00000465074 NAP1L2Q9ULW6 460 aaPredicted RBP14.16□□□□□ -0.14
XRN1-204ENST00000465074 PCDHA1Q9Y5I3 950 aa14.16□□□□□ -0.14
XRN1-204ENST00000465074 B4DLN1 442 aa14.15□□□□□ -0.14
XRN1-204ENST00000465074 SH2B2O14492 632 aaPredicted RBP14.15□□□□□ -0.14
XRN1-204ENST00000465074 ZBTB5O15062 677 aa14.15□□□□□ -0.14
XRN1-204ENST00000465074 PQBP1O60828 265 aaKnown RBP14.15□□□□□ -0.14
XRN1-204ENST00000465074 PPP1R11O60927 126 aaPredicted RBP14.15□□□□□ -0.14
XRN1-204ENST00000465074 ASGR1P07306 291 aa14.15□□□□□ -0.14
XRN1-204ENST00000465074 SMPD1P17405 629 aa14.15□□□□□ -0.14
XRN1-204ENST00000465074 MRPL12P52815 198 aaKnown RBP14.15□□□□□ -0.14
XRN1-204ENST00000465074 TLE2Q04725 743 aa14.15□□□□□ -0.14
XRN1-204ENST00000465074 TROAPQ12815 778 aa14.15□□□□□ -0.14
XRN1-204ENST00000465074 IQSEC1Q6DN90 963 aa14.15□□□□□ -0.14
XRN1-204ENST00000465074 TAPT1Q6NXT6 567 aa14.15□□□□□ -0.14
XRN1-204ENST00000465074 TLK2Q86UE8 772 aa14.15□□□□□ -0.14
XRN1-204ENST00000465074 CMTR1Q8N1G2 835 aaKnown RBP14.15□□□□□ -0.14
XRN1-204ENST00000465074 TMTC2Q8N394 836 aa14.15□□□□□ -0.14
XRN1-204ENST00000465074 PCSK9Q8NBP7 692 aaKnown RBP14.15□□□□□ -0.14
XRN1-204ENST00000465074 KLHDC9Q8NEP7 349 aa14.15□□□□□ -0.14
XRN1-204ENST00000465074 TCEANC2Q96MN5 208 aa14.15□□□□□ -0.14
XRN1-204ENST00000465074 NEK1Q96PY6 1258 aa14.15□□□□□ -0.14
XRN1-204ENST00000465074 TSEN34Q9BSV6 310 aaKnown RBP14.15□□□□□ -0.14
XRN1-204ENST00000465074 WDR11Q9BZH6 1224 aa14.15□□□□□ -0.14
XRN1-204ENST00000465074 UBE2OQ9C0C9 1292 aaKnown RBP14.15□□□□□ -0.14
XRN1-204ENST00000465074 EIF2AK2P19525 551 aaKnown RBP14.14□□□□□ -0.15
XRN1-204ENST00000465074 HOXA13P31271 388 aaPredicted RBP14.14□□□□□ -0.15
XRN1-204ENST00000465074 KIF5BP33176 963 aa14.14□□□□□ -0.15
XRN1-204ENST00000465074 GJA9P57773 515 aa14.14□□□□□ -0.15
XRN1-204ENST00000465074 FGD1P98174 961 aa14.14□□□□□ -0.15
XRN1-204ENST00000465074 SLC35G1Q2M3R5 365 aa14.14□□□□□ -0.15
XRN1-204ENST00000465074 ARHGEF16Q5VV41 709 aa14.14□□□□□ -0.15
XRN1-204ENST00000465074 SYNE3Q6ZMZ3 975 aa14.14□□□□□ -0.15
XRN1-204ENST00000465074 RASEFQ8IZ41 740 aa14.14□□□□□ -0.15
XRN1-204ENST00000465074 CCDC82Q8N4S0 544 aa14.14□□□□□ -0.15
XRN1-204ENST00000465074 RGS22Q8NE09 1264 aa14.14□□□□□ -0.15
XRN1-204ENST00000465074 DNERQ8NFT8 737 aa14.14□□□□□ -0.15
XRN1-204ENST00000465074 SYTL5Q8TDW5 730 aaPredicted RBP14.14□□□□□ -0.15
XRN1-204ENST00000465074 GLT1D1Q96MS3 346 aa14.14□□□□□ -0.15
XRN1-204ENST00000465074 RMDN3Q96TC7 470 aa14.14□□□□□ -0.15
XRN1-204ENST00000465074 COL20A1Q9P218 1284 aa14.14□□□□□ -0.15
XRN1-204ENST00000465074 SLC12A7Q9Y666 1083 aa14.14□□□□□ -0.15
XRN1-204ENST00000465074 PNMA6FA0A0J9YX94 578 aa14.13□□□□□ -0.15
XRN1-204ENST00000465074 MOXD2PA6NHM9 499 aa14.13□□□□□ -0.15
XRN1-204ENST00000465074 CYTH3O43739 400 aa14.13□□□□□ -0.15
XRN1-204ENST00000465074 DDAH1O94760 285 aa14.13□□□□□ -0.15
XRN1-204ENST00000465074 MYCLP12524 364 aaPredicted RBP14.13□□□□□ -0.15
XRN1-204ENST00000465074 FSCN1Q16658 493 aaKnown RBP14.13□□□□□ -0.15
XRN1-204ENST00000465074 ADCK5Q3MIX3 580 aa14.13□□□□□ -0.15
XRN1-204ENST00000465074 CXCL17Q6UXB2 119 aa14.13□□□□□ -0.15
XRN1-204ENST00000465074 SEPT14Q6ZU15 432 aa14.13□□□□□ -0.15
XRN1-204ENST00000465074 FCHSD1Q86WN1 690 aa14.13□□□□□ -0.15
XRN1-204ENST00000465074 MORC4Q8TE76 937 aa14.13□□□□□ -0.15
XRN1-204ENST00000465074 NSUN6Q8TEA1 469 aaKnown RBP14.13□□□□□ -0.15
XRN1-204ENST00000465074 RRP36Q96EU6 259 aaKnown RBP14.13□□□□□ -0.15
XRN1-204ENST00000465074 UPF3AQ9H1J1 476 aaKnown RBP14.13□□□□□ -0.15
XRN1-204ENST00000465074 RIOX1Q9H6W3 641 aa14.13□□□□□ -0.15
XRN1-204ENST00000465074 hCG_1642624A0A1W2PR95 340 aa14.12□□□□□ -0.15
XRN1-204ENST00000465074 DCDC2CA8MYV0 355 aa14.12□□□□□ -0.15
XRN1-204ENST00000465074 PLEKHA8P1O95397 391 aa14.12□□□□□ -0.15
XRN1-204ENST00000465074 CPA1P15085 419 aa14.12□□□□□ -0.15
XRN1-204ENST00000465074 CHMP4BP1P59074 171 aa14.12□□□□□ -0.15
XRN1-204ENST00000465074 TRAF1Q13077 416 aa14.12□□□□□ -0.15
XRN1-204ENST00000465074 SH3RF1Q7Z6J0 888 aa14.12□□□□□ -0.15
XRN1-204ENST00000465074 MICU3Q86XE3 530 aa14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms