RNA–Protein interactions for RNA: ENST00000464425.1

VPS52-215, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 1,060 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-215ENST00000464425 KLF18A0A0U1RQI7 1052 aa19.74■□□□□ 0.75
VPS52-215ENST00000464425 ZBTB43O43298 467 aa19.74■□□□□ 0.75
VPS52-215ENST00000464425 NECAB2Q7Z6G3 386 aa19.74■□□□□ 0.75
VPS52-215ENST00000464425 MCF2L2Q86YR7 1114 aa19.74■□□□□ 0.75
VPS52-215ENST00000464425 RGS22Q8NE09 1264 aa19.74■□□□□ 0.75
VPS52-215ENST00000464425 LENG1Q96BZ8 264 aaPredicted RBP19.74■□□□□ 0.75
VPS52-215ENST00000464425 ABHD16BQ9H3Z7 469 aa19.74■□□□□ 0.75
VPS52-215ENST00000464425 ADD3Q9UEY8 706 aaKnown RBP19.74■□□□□ 0.75
VPS52-215ENST00000464425 RBM25P49756 843 aaKnown RBP19.73■□□□□ 0.75
VPS52-215ENST00000464425 ALDH5A1P51649 535 aaPredicted RBP19.73■□□□□ 0.75
VPS52-215ENST00000464425 APOBRQ0VD83 1088 aa19.73■□□□□ 0.75
VPS52-215ENST00000464425 EEPD1Q7L9B9 569 aa19.73■□□□□ 0.75
VPS52-215ENST00000464425 BRF1Q92994 677 aa19.73■□□□□ 0.75
VPS52-215ENST00000464425 RRP36Q96EU6 259 aaKnown RBP19.73■□□□□ 0.75
VPS52-215ENST00000464425 SPZ1Q9BXG8 430 aa19.73■□□□□ 0.75
VPS52-215ENST00000464425 C22orf23Q9BZE7 217 aa19.73■□□□□ 0.75
VPS52-215ENST00000464425 FAM184BQ9ULE4 1060 aa19.73■□□□□ 0.75
VPS52-215ENST00000464425 TNRC18O15417 2968 aaPredicted RBP19.73■□□□□ 0.75
VPS52-215ENST00000464425 hCG_1642624A0A1W2PR95 340 aa19.72■□□□□ 0.75
VPS52-215ENST00000464425 CFBP00751 764 aa19.72■□□□□ 0.75
VPS52-215ENST00000464425 RARBP10826 455 aa19.72■□□□□ 0.75
VPS52-215ENST00000464425 AKR1A1P14550 325 aa19.72■□□□□ 0.75
VPS52-215ENST00000464425 SMARCA1P28370 1054 aa19.72■□□□□ 0.75
VPS52-215ENST00000464425 RTN1Q16799 776 aa19.72■□□□□ 0.75
VPS52-215ENST00000464425 CCDC144BQ3MJ40 725 aa19.72■□□□□ 0.75
VPS52-215ENST00000464425 GJC2Q5T442 439 aaPredicted RBP19.72■□□□□ 0.75
VPS52-215ENST00000464425 PDE4DIPQ5VU43 2346 aa19.72■□□□□ 0.75
VPS52-215ENST00000464425 TMTC3Q6ZXV5 915 aa19.72■□□□□ 0.75
VPS52-215ENST00000464425 RUFY3Q7L099 469 aa19.72■□□□□ 0.75
VPS52-215ENST00000464425 SYTL5Q8TDW5 730 aaPredicted RBP19.72■□□□□ 0.75
VPS52-215ENST00000464425 KATNBL1Q9H079 304 aa19.72■□□□□ 0.75
VPS52-215ENST00000464425 C11orf49Q9H6J7 331 aa19.72■□□□□ 0.75
VPS52-215ENST00000464425 ZSWIM6Q9HCJ5 1215 aa19.72■□□□□ 0.75
VPS52-215ENST00000464425 MCM3APO60318 1980 aa19.72■□□□□ 0.75
VPS52-215ENST00000464425 MYH6P13533 1939 aa19.71■□□□□ 0.75
VPS52-215ENST00000464425 GOLGA8AA7E2F4 631 aa19.71■□□□□ 0.75
VPS52-215ENST00000464425 GOLGA8BA8MQT2 603 aa19.71■□□□□ 0.75
VPS52-215ENST00000464425 OPLAHO14841 1288 aa19.71■□□□□ 0.75
VPS52-215ENST00000464425 ARRDC4Q8NCT1 418 aa19.71■□□□□ 0.75
VPS52-215ENST00000464425 DPF3Q92784 378 aa19.71■□□□□ 0.75
VPS52-215ENST00000464425 TAAR1Q96RJ0 339 aa19.71■□□□□ 0.75
VPS52-215ENST00000464425 UPF3BQ9BZI7 483 aaKnown RBP19.71■□□□□ 0.75
VPS52-215ENST00000464425 COL20A1Q9P218 1284 aa19.71■□□□□ 0.75
VPS52-215ENST00000464425 SEC63Q9UGP8 760 aaKnown RBP19.71■□□□□ 0.75
VPS52-215ENST00000464425 CYP46A1Q9Y6A2 500 aa19.71■□□□□ 0.75
VPS52-215ENST00000464425 PGK1P00558 417 aa19.7■□□□□ 0.74
VPS52-215ENST00000464425 TRAF1Q13077 416 aa19.7■□□□□ 0.74
VPS52-215ENST00000464425 FBXO16Q8IX29 292 aaPredicted RBP19.7■□□□□ 0.74
VPS52-215ENST00000464425 FBXL16Q8N461 479 aa19.7■□□□□ 0.74
VPS52-215ENST00000464425 XPNPEP3Q9NQH7 507 aa19.7■□□□□ 0.74
VPS52-215ENST00000464425 PDGFCQ9NRA1 345 aa19.7■□□□□ 0.74
VPS52-215ENST00000464425 RBM28Q9NW13 759 aaKnown RBP19.7■□□□□ 0.74
VPS52-215ENST00000464425 ADCY6O43306 1168 aa19.69■□□□□ 0.74
VPS52-215ENST00000464425 HOXA13P31271 388 aaPredicted RBP19.69■□□□□ 0.74
VPS52-215ENST00000464425 PDE4DQ08499 809 aa19.69■□□□□ 0.74
VPS52-215ENST00000464425 NOL8Q76FK4 1167 aaKnown RBP19.69■□□□□ 0.74
VPS52-215ENST00000464425 DNERQ8NFT8 737 aa19.69■□□□□ 0.74
VPS52-215ENST00000464425 MORC4Q8TE76 937 aa19.69■□□□□ 0.74
VPS52-215ENST00000464425 HTATIP2Q9BUP3 242 aa19.69■□□□□ 0.74
VPS52-215ENST00000464425 MAF1Q9H063 256 aa19.69■□□□□ 0.74
VPS52-215ENST00000464425 LCTP09848 1927 aa19.68■□□□□ 0.74
VPS52-215ENST00000464425 C11orf97A0A1B0GVM6 126 aaPredicted RBP19.68■□□□□ 0.74
VPS52-215ENST00000464425 DNM1LO00429 736 aa19.68■□□□□ 0.74
VPS52-215ENST00000464425 CDC27P30260 824 aa19.68■□□□□ 0.74
VPS52-215ENST00000464425 ADCYAP1R1P41586 468 aa19.68■□□□□ 0.74
VPS52-215ENST00000464425 METAP2P50579 478 aaKnown RBP eCLIP19.68■□□□□ 0.74
VPS52-215ENST00000464425 HSD17B4P51659 736 aa19.68■□□□□ 0.74
VPS52-215ENST00000464425 LRRC41Q15345 812 aa19.68■□□□□ 0.74
VPS52-215ENST00000464425 TBC1D32Q96NH3 1257 aa19.68■□□□□ 0.74
VPS52-215ENST00000464425 RMDN3Q96TC7 470 aa19.68■□□□□ 0.74
VPS52-215ENST00000464425 MPHOSPH6Q99547 160 aaKnown RBP19.68■□□□□ 0.74
VPS52-215ENST00000464425 AGXT2Q9BYV1 514 aa19.68■□□□□ 0.74
VPS52-215ENST00000464425 SENP6Q9GZR1 1112 aaPredicted RBP19.68■□□□□ 0.74
VPS52-215ENST00000464425 FAM217BQ9NTX9 383 aaPredicted RBP19.68■□□□□ 0.74
VPS52-215ENST00000464425 KBTBD13C9JR72 458 aa19.67■□□□□ 0.74
VPS52-215ENST00000464425 GCOM1H8Y6P7 765 aaPredicted RBP19.67■□□□□ 0.74
VPS52-215ENST00000464425 DUSP11O75319 330 aaKnown RBP19.67■□□□□ 0.74
VPS52-215ENST00000464425 POLR2MP0CAP2 368 aa19.67■□□□□ 0.74
VPS52-215ENST00000464425 COL6A1P12109 1028 aa19.67■□□□□ 0.74
VPS52-215ENST00000464425 ADD1P35611 737 aaKnown RBP19.67■□□□□ 0.74
VPS52-215ENST00000464425 TNFAIP2Q03169 654 aa19.67■□□□□ 0.74
VPS52-215ENST00000464425 ARHGEF16Q5VV41 709 aa19.67■□□□□ 0.74
VPS52-215ENST00000464425 TAPT1Q6NXT6 567 aa19.67■□□□□ 0.74
VPS52-215ENST00000464425 NSUN6Q8TEA1 469 aaKnown RBP19.67■□□□□ 0.74
VPS52-215ENST00000464425 LARP6Q9BRS8 491 aaKnown RBP19.67■□□□□ 0.74
VPS52-215ENST00000464425 VTA1Q9NP79 307 aa19.67■□□□□ 0.74
VPS52-215ENST00000464425 PDRG1Q9NUG6 133 aa19.67■□□□□ 0.74
VPS52-215ENST00000464425 LOC102724159A0A0B4J2E5 919 aa19.66■□□□□ 0.74
VPS52-215ENST00000464425 B4DLN1 442 aa19.66■□□□□ 0.74
VPS52-215ENST00000464425 SMPD1P17405 629 aa19.66■□□□□ 0.74
VPS52-215ENST00000464425 EIF2AK2P19525 551 aaKnown RBP19.66■□□□□ 0.74
VPS52-215ENST00000464425 PTGS1P23219 599 aa19.66■□□□□ 0.74
VPS52-215ENST00000464425 EDNRBP24530 442 aa19.66■□□□□ 0.74
VPS52-215ENST00000464425 MRPL12P52815 198 aaKnown RBP19.66■□□□□ 0.74
VPS52-215ENST00000464425 RCAN1P53805 252 aa19.66■□□□□ 0.74
VPS52-215ENST00000464425 IRX5P78411 483 aaPredicted RBP19.66■□□□□ 0.74
VPS52-215ENST00000464425 TOB2Q14106 344 aaPredicted RBP19.66■□□□□ 0.74
VPS52-215ENST00000464425 PWP2Q15269 919 aaKnown RBP19.66■□□□□ 0.74
VPS52-215ENST00000464425 TMEM63BQ5T3F8 832 aa19.66■□□□□ 0.74
VPS52-215ENST00000464425 RNF180Q86T96 592 aa19.66■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms