RNA–Protein interactions for RNA: ENST00000463631.1

HMGN1-209, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 583 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-209ENST00000463631 OTUD7AQ8TE49 926 aaPredicted RBP20.44■□□□□ 0.86
HMGN1-209ENST00000463631 PPM1EQ8WY54 764 aa20.44■□□□□ 0.86
HMGN1-209ENST00000463631 POLR3EQ9NVU0 708 aa20.44■□□□□ 0.86
HMGN1-209ENST00000463631 PCDHA11Q9Y5I1 949 aa20.44■□□□□ 0.86
HMGN1-209ENST00000463631 SLC4A7Q9Y6M7 1214 aa20.44■□□□□ 0.86
HMGN1-209ENST00000463631 MX1P20591 662 aa20.43■□□□□ 0.86
HMGN1-209ENST00000463631 MRPS5P82675 430 aaKnown RBP20.43■□□□□ 0.86
HMGN1-209ENST00000463631 CTDSPL2Q05D32 466 aa20.43■□□□□ 0.86
HMGN1-209ENST00000463631 KIAA1211Q6ZU35 1233 aa20.43■□□□□ 0.86
HMGN1-209ENST00000463631 ADAMTS19Q8TE59 1207 aa20.43■□□□□ 0.86
HMGN1-209ENST00000463631 SALL3Q9BXA9 1300 aa20.43■□□□□ 0.86
HMGN1-209ENST00000463631 RBM47A0AV96 593 aaKnown RBP20.42■□□□□ 0.86
HMGN1-209ENST00000463631 SUPT20HL2P0C7V6 817 aa20.42■□□□□ 0.86
HMGN1-209ENST00000463631 CPT1AP50416 773 aa20.42■□□□□ 0.86
HMGN1-209ENST00000463631 ALDH5A1P51649 535 aaPredicted RBP20.42■□□□□ 0.86
HMGN1-209ENST00000463631 PURAQ00577 322 aaKnown RBP20.42■□□□□ 0.86
HMGN1-209ENST00000463631 CCDC96Q2M329 555 aa20.42■□□□□ 0.86
HMGN1-209ENST00000463631 PPP2R2DQ66LE6 453 aa20.42■□□□□ 0.86
HMGN1-209ENST00000463631 CHMP4CQ96CF2 233 aa20.42■□□□□ 0.86
HMGN1-209ENST00000463631 PURBQ96QR8 312 aaKnown RBP20.42■□□□□ 0.86
HMGN1-209ENST00000463631 NFIBO00712 420 aa20.41■□□□□ 0.86
HMGN1-209ENST00000463631 RANBP6O60518 1105 aaKnown RBP20.41■□□□□ 0.86
HMGN1-209ENST00000463631 IGFBP4P22692 258 aa20.41■□□□□ 0.86
HMGN1-209ENST00000463631 BAATQ14032 418 aaPredicted RBP20.41■□□□□ 0.86
HMGN1-209ENST00000463631 ALX1Q15699 326 aa20.41■□□□□ 0.86
HMGN1-209ENST00000463631 WDR11Q9BZH6 1224 aa20.41■□□□□ 0.86
HMGN1-209ENST00000463631 INCENPQ9NQS7 918 aa20.41■□□□□ 0.86
HMGN1-209ENST00000463631 PNMA2Q9UL42 364 aa20.41■□□□□ 0.86
HMGN1-209ENST00000463631 TNKSO95271 1327 aa20.41■□□□□ 0.86
HMGN1-209ENST00000463631 ATP2A2P16615 1042 aaKnown RBP20.4■□□□□ 0.86
HMGN1-209ENST00000463631 SCN5AQ14524 2016 aa20.4■□□□□ 0.86
HMGN1-209ENST00000463631 SYDE2Q5VT97 1194 aa20.4■□□□□ 0.86
HMGN1-209ENST00000463631 SCLYQ96I15 445 aa20.4■□□□□ 0.86
HMGN1-209ENST00000463631 TRMT13Q9NUP7 481 aaKnown RBP20.4■□□□□ 0.86
HMGN1-209ENST00000463631 PRRC2BQ5JSZ5 2229 aaKnown RBP20.39■□□□□ 0.86
HMGN1-209ENST00000463631 XIRP2A4UGR9 3374 aa20.39■□□□□ 0.86
HMGN1-209ENST00000463631 ZMYM6O95789 1325 aa20.39■□□□□ 0.85
HMGN1-209ENST00000463631 TOP1P11387 765 aaKnown RBP20.39■□□□□ 0.85
HMGN1-209ENST00000463631 RABGGTBP53611 331 aa20.39■□□□□ 0.85
HMGN1-209ENST00000463631 CCDC85BQ15834 202 aaPredicted RBP20.39■□□□□ 0.85
HMGN1-209ENST00000463631 VPS53Q5VIR6 699 aa20.39■□□□□ 0.85
HMGN1-209ENST00000463631 TTBK2Q6IQ55 1244 aa20.39■□□□□ 0.85
HMGN1-209ENST00000463631 MTG1Q9BT17 334 aaPredicted RBP20.39■□□□□ 0.85
HMGN1-209ENST00000463631 TCP11L1Q9NUJ3 509 aa20.39■□□□□ 0.85
HMGN1-209ENST00000463631 PCDHB15Q9Y5E8 787 aa20.39■□□□□ 0.85
HMGN1-209ENST00000463631 WDR19Q8NEZ3 1342 aa20.38■□□□□ 0.85
HMGN1-209ENST00000463631 RAD50Q92878 1312 aa20.38■□□□□ 0.85
HMGN1-209ENST00000463631 ZBBXA8MT70 800 aa20.38■□□□□ 0.85
HMGN1-209ENST00000463631 PITPNM1O00562 1244 aa20.38■□□□□ 0.85
HMGN1-209ENST00000463631 NKRFO15226 690 aaKnown RBP eCLIP20.38■□□□□ 0.85
HMGN1-209ENST00000463631 POU3F3P20264 500 aaPredicted RBP20.38■□□□□ 0.85
HMGN1-209ENST00000463631 EDNRBP24530 442 aa20.38■□□□□ 0.85
HMGN1-209ENST00000463631 RFC2P35250 354 aa20.38■□□□□ 0.85
HMGN1-209ENST00000463631 SLC16A2P36021 539 aa20.38■□□□□ 0.85
HMGN1-209ENST00000463631 TTLL4Q14679 1199 aa20.38■□□□□ 0.85
HMGN1-209ENST00000463631 SLC30A10Q6XR72 485 aa20.38■□□□□ 0.85
HMGN1-209ENST00000463631 TICAM2Q86XR7 235 aa20.38■□□□□ 0.85
HMGN1-209ENST00000463631 CLEC4DQ8WXI8 215 aa20.38■□□□□ 0.85
HMGN1-209ENST00000463631 UHRF1Q96T88 793 aaPredicted RBP20.38■□□□□ 0.85
HMGN1-209ENST00000463631 TMEM47Q9BQJ4 181 aa20.38■□□□□ 0.85
HMGN1-209ENST00000463631 TSPYL2Q9H2G4 693 aaPredicted RBP20.38■□□□□ 0.85
HMGN1-209ENST00000463631 PTPDC1A2A3K4 754 aa20.37■□□□□ 0.85
HMGN1-209ENST00000463631 A6NJR5 290 aa20.37■□□□□ 0.85
HMGN1-209ENST00000463631 CYP2C9P11712 490 aa20.37■□□□□ 0.85
HMGN1-209ENST00000463631 MYOGP15173 224 aa20.37■□□□□ 0.85
HMGN1-209ENST00000463631 COL9A1P20849 921 aa20.37■□□□□ 0.85
HMGN1-209ENST00000463631 PPP2R5BQ15173 497 aa20.37■□□□□ 0.85
HMGN1-209ENST00000463631 BRDTQ58F21 947 aaPredicted RBP20.37■□□□□ 0.85
HMGN1-209ENST00000463631 NFRKBQ6P4R8 1299 aa20.37■□□□□ 0.85
HMGN1-209ENST00000463631 OR6J1Q8NGC5 347 aa20.37■□□□□ 0.85
HMGN1-209ENST00000463631 SCFD2Q8WU76 684 aa20.37■□□□□ 0.85
HMGN1-209ENST00000463631 EVI5LQ96CN4 794 aa20.37■□□□□ 0.85
HMGN1-209ENST00000463631 SLC9A7Q96T83 725 aa20.37■□□□□ 0.85
HMGN1-209ENST00000463631 MPHOSPH6Q99547 160 aaKnown RBP20.37■□□□□ 0.85
HMGN1-209ENST00000463631 HELLSQ9NRZ9 838 aa20.37■□□□□ 0.85
HMGN1-209ENST00000463631 MTMR7Q9Y216 660 aa20.37■□□□□ 0.85
HMGN1-209ENST00000463631 KPNA6O60684 536 aa20.36■□□□□ 0.85
HMGN1-209ENST00000463631 MYL3P08590 195 aa20.36■□□□□ 0.85
HMGN1-209ENST00000463631 PDHBP11177 359 aa20.36■□□□□ 0.85
HMGN1-209ENST00000463631 ACTN1P12814 892 aa20.36■□□□□ 0.85
HMGN1-209ENST00000463631 PTPN11Q06124 597 aaPredicted RBP20.36■□□□□ 0.85
HMGN1-209ENST00000463631 RNF207Q6ZRF8 634 aa20.36■□□□□ 0.85
HMGN1-209ENST00000463631 IL27Q8NEV9 243 aa20.36■□□□□ 0.85
HMGN1-209ENST00000463631 DNERQ8NFT8 737 aa20.36■□□□□ 0.85
HMGN1-209ENST00000463631 GPHNQ9NQX3 736 aaPredicted RBP20.36■□□□□ 0.85
HMGN1-209ENST00000463631 FRMPD2Q68DX3 1309 aaPredicted RBP20.35■□□□□ 0.85
HMGN1-209ENST00000463631 CA3P07451 260 aa20.35■□□□□ 0.85
HMGN1-209ENST00000463631 SNHG28P0DPA3 235 aa20.35■□□□□ 0.85
HMGN1-209ENST00000463631 PDE4DQ08499 809 aa20.35■□□□□ 0.85
HMGN1-209ENST00000463631 NBPF20Q3BBV1 942 aa20.35■□□□□ 0.85
HMGN1-209ENST00000463631 TMEM67Q5HYA8 995 aa20.35■□□□□ 0.85
HMGN1-209ENST00000463631 PHOSPHO2Q8TCD6 241 aa20.35■□□□□ 0.85
HMGN1-209ENST00000463631 FGAP02671 866 aa20.34■□□□□ 0.85
HMGN1-209ENST00000463631 PCP11498 1178 aaKnown RBP20.34■□□□□ 0.85
HMGN1-209ENST00000463631 CALML3P27482 149 aa20.34■□□□□ 0.85
HMGN1-209ENST00000463631 RPS6P62753 249 aaKnown RBP20.34■□□□□ 0.85
HMGN1-209ENST00000463631 ZNF543Q08ER8 600 aa20.34■□□□□ 0.85
HMGN1-209ENST00000463631 AAK1Q2M2I8 961 aa20.34■□□□□ 0.85
HMGN1-209ENST00000463631 MAF1Q9H063 256 aa20.34■□□□□ 0.85
HMGN1-209ENST00000463631 GPCPD1Q9NPB8 672 aa20.34■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms