RNA–Protein interactions for RNA: ENST00000463440.1

COL1A1-202, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 614 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-202ENST00000463440 RTP1P59025 263 aa18.86■□□□□ 0.61
COL1A1-202ENST00000463440 IQSEC1Q6DN90 963 aa18.86■□□□□ 0.61
COL1A1-202ENST00000463440 EEPD1Q7L9B9 569 aa18.86■□□□□ 0.61
COL1A1-202ENST00000463440 FBXO16Q8IX29 292 aaPredicted RBP18.86■□□□□ 0.61
COL1A1-202ENST00000463440 PCSK9Q8NBP7 692 aaKnown RBP18.86■□□□□ 0.61
COL1A1-202ENST00000463440 KLHDC9Q8NEP7 349 aa18.86■□□□□ 0.61
COL1A1-202ENST00000463440 UPF3AQ9H1J1 476 aaKnown RBP18.86■□□□□ 0.61
COL1A1-202ENST00000463440 RIOX1Q9H6W3 641 aa18.86■□□□□ 0.61
COL1A1-202ENST00000463440 GPHNQ9NQX3 736 aaPredicted RBP18.86■□□□□ 0.61
COL1A1-202ENST00000463440 DDX49Q9Y6V7 483 aaKnown RBP18.86■□□□□ 0.61
COL1A1-202ENST00000463440 MOXD2PA6NHM9 499 aa18.85■□□□□ 0.61
COL1A1-202ENST00000463440 ADCY6O43306 1168 aa18.85■□□□□ 0.61
COL1A1-202ENST00000463440 SYN1P17600 705 aa18.85■□□□□ 0.61
COL1A1-202ENST00000463440 CST5P28325 142 aaPredicted RBP18.85■□□□□ 0.61
COL1A1-202ENST00000463440 ACLYP53396 1101 aa18.85■□□□□ 0.61
COL1A1-202ENST00000463440 PDE4DQ08499 809 aa18.85■□□□□ 0.61
COL1A1-202ENST00000463440 KRT32Q14532 448 aa18.85■□□□□ 0.61
COL1A1-202ENST00000463440 KCNA10Q16322 511 aa18.85■□□□□ 0.61
COL1A1-202ENST00000463440 TSGA10IPQ3SY00 556 aa18.85■□□□□ 0.61
COL1A1-202ENST00000463440 TAPT1Q6NXT6 567 aa18.85■□□□□ 0.61
COL1A1-202ENST00000463440 HOMER1Q86YM7 354 aa18.85■□□□□ 0.61
COL1A1-202ENST00000463440 NEK1Q96PY6 1258 aa18.85■□□□□ 0.61
COL1A1-202ENST00000463440 ATP11BQ9Y2G3 1177 aa18.85■□□□□ 0.61
COL1A1-202ENST00000463440 PCDHA1Q9Y5I3 950 aa18.85■□□□□ 0.61
COL1A1-202ENST00000463440 LRRC37A2A6NM11 1700 aa18.84■□□□□ 0.61
COL1A1-202ENST00000463440 C11orf97A0A1B0GVM6 126 aaPredicted RBP18.84■□□□□ 0.61
COL1A1-202ENST00000463440 A0A1W2PQ45 241 aaPredicted RBP18.84■□□□□ 0.61
COL1A1-202ENST00000463440 A0A1W2PQY0 241 aa18.84■□□□□ 0.61
COL1A1-202ENST00000463440 CALM1P0DP23 149 aa18.84■□□□□ 0.61
COL1A1-202ENST00000463440 CALM2P0DP24 149 aa18.84■□□□□ 0.61
COL1A1-202ENST00000463440 CALM3P0DP25 149 aa18.84■□□□□ 0.61
COL1A1-202ENST00000463440 SNX17Q15036 470 aa18.84■□□□□ 0.61
COL1A1-202ENST00000463440 GNASQ5JWF2 1037 aa18.84■□□□□ 0.61
COL1A1-202ENST00000463440 C1orf53Q5VUE5 145 aa18.84■□□□□ 0.61
COL1A1-202ENST00000463440 SYTL5Q8TDW5 730 aaPredicted RBP18.84■□□□□ 0.61
COL1A1-202ENST00000463440 TBC1D5Q92609 795 aa18.84■□□□□ 0.61
COL1A1-202ENST00000463440 PIGSQ96S52 555 aa18.84■□□□□ 0.61
COL1A1-202ENST00000463440 LZTS2Q9BRK4 669 aa18.84■□□□□ 0.61
COL1A1-202ENST00000463440 MYL10Q9BUA6 226 aa18.84■□□□□ 0.61
COL1A1-202ENST00000463440 AP5M1Q9H0R1 490 aa18.84■□□□□ 0.61
COL1A1-202ENST00000463440 PDGFCQ9NRA1 345 aa18.84■□□□□ 0.61
COL1A1-202ENST00000463440 PNMA6FA0A0J9YX94 578 aa18.83■□□□□ 0.6
COL1A1-202ENST00000463440 MYADML2A6NDP7 307 aa18.83■□□□□ 0.6
COL1A1-202ENST00000463440 CYTH3O43739 400 aa18.83■□□□□ 0.6
COL1A1-202ENST00000463440 PPP1R11O60927 126 aaPredicted RBP18.83■□□□□ 0.6
COL1A1-202ENST00000463440 REC8O95072 547 aa18.83■□□□□ 0.6
COL1A1-202ENST00000463440 CFBP00751 764 aa18.83■□□□□ 0.6
COL1A1-202ENST00000463440 SMPD1P17405 629 aa18.83■□□□□ 0.6
COL1A1-202ENST00000463440 EDNRBP24530 442 aa18.83■□□□□ 0.6
COL1A1-202ENST00000463440 GNAQP50148 359 aa18.83■□□□□ 0.6
COL1A1-202ENST00000463440 SLC35G1Q2M3R5 365 aa18.83■□□□□ 0.6
COL1A1-202ENST00000463440 CCSAPQ6IQ19 270 aaPredicted RBP18.83■□□□□ 0.6
COL1A1-202ENST00000463440 TLK2Q86UE8 772 aa18.83■□□□□ 0.6
COL1A1-202ENST00000463440 NSUN6Q8TEA1 469 aaKnown RBP18.83■□□□□ 0.6
COL1A1-202ENST00000463440 LRRC2Q9BYS8 371 aa18.83■□□□□ 0.6
COL1A1-202ENST00000463440 STARD7Q9NQZ5 370 aa18.83■□□□□ 0.6
COL1A1-202ENST00000463440 RBM27Q9P2N5 1060 aaKnown RBP18.83■□□□□ 0.6
COL1A1-202ENST00000463440 PRKAG2Q9UGJ0 569 aa18.83■□□□□ 0.6
COL1A1-202ENST00000463440 GNEQ9Y223 722 aaKnown RBP18.83■□□□□ 0.6
COL1A1-202ENST00000463440 Q9Y3F1 56 aa18.83■□□□□ 0.6
COL1A1-202ENST00000463440 SLC12A7Q9Y666 1083 aa18.83■□□□□ 0.6
COL1A1-202ENST00000463440 DYNC1LI2O43237 492 aaPredicted RBP18.82■□□□□ 0.6
COL1A1-202ENST00000463440 ASGR1P07306 291 aa18.82■□□□□ 0.6
COL1A1-202ENST00000463440 SMARCA1P28370 1054 aa18.82■□□□□ 0.6
COL1A1-202ENST00000463440 NKX3-2P78367 333 aa18.82■□□□□ 0.6
COL1A1-202ENST00000463440 COL9A3Q14050 684 aaPredicted RBP18.82■□□□□ 0.6
COL1A1-202ENST00000463440 TRIM60Q495X7 471 aa18.82■□□□□ 0.6
COL1A1-202ENST00000463440 SYNE3Q6ZMZ3 975 aa18.82■□□□□ 0.6
COL1A1-202ENST00000463440 DHX32Q7L7V1 743 aaKnown RBP18.82■□□□□ 0.6
COL1A1-202ENST00000463440 RASEFQ8IZ41 740 aa18.82■□□□□ 0.6
COL1A1-202ENST00000463440 SAMD3Q8N6K7 520 aa18.82■□□□□ 0.6
COL1A1-202ENST00000463440 GLT1D1Q96MS3 346 aa18.82■□□□□ 0.6
COL1A1-202ENST00000463440 SPZ1Q9BXG8 430 aa18.82■□□□□ 0.6
COL1A1-202ENST00000463440 WDR11Q9BZH6 1224 aa18.82■□□□□ 0.6
COL1A1-202ENST00000463440 PRO3102Q9H379 93 aa18.82■□□□□ 0.6
COL1A1-202ENST00000463440 MAP3K20Q9NYL2 800 aaKnown RBP18.82■□□□□ 0.6
COL1A1-202ENST00000463440 BAZ2BQ9UIF8 2168 aaKnown RBP18.82■□□□□ 0.6
COL1A1-202ENST00000463440 RBM47A0AV96 593 aaKnown RBP18.81■□□□□ 0.6
COL1A1-202ENST00000463440 HMGB1P09429 215 aaKnown RBP18.81■□□□□ 0.6
COL1A1-202ENST00000463440 HSD17B4P51659 736 aa18.81■□□□□ 0.6
COL1A1-202ENST00000463440 DUSP28Q4G0W2 176 aa18.81■□□□□ 0.6
COL1A1-202ENST00000463440 SGMS1Q86VZ5 419 aa18.81■□□□□ 0.6
COL1A1-202ENST00000463440 RRP36Q96EU6 259 aaKnown RBP18.81■□□□□ 0.6
COL1A1-202ENST00000463440 TAAR1Q96RJ0 339 aa18.81■□□□□ 0.6
COL1A1-202ENST00000463440 IWS1Q96ST2 819 aa18.81■□□□□ 0.6
COL1A1-202ENST00000463440 RMDN3Q96TC7 470 aa18.81■□□□□ 0.6
COL1A1-202ENST00000463440 GDF15Q99988 308 aa18.81■□□□□ 0.6
COL1A1-202ENST00000463440 COL20A1Q9P218 1284 aa18.81■□□□□ 0.6
COL1A1-202ENST00000463440 ELP1O95163 1332 aa18.8■□□□□ 0.6
COL1A1-202ENST00000463440 A0A1W2PPC1 479 aa18.8■□□□□ 0.6
COL1A1-202ENST00000463440 OPLAHO14841 1288 aa18.8■□□□□ 0.6
COL1A1-202ENST00000463440 CTAGE5O15320 804 aa18.8■□□□□ 0.6
COL1A1-202ENST00000463440 ZEB2O60315 1214 aa18.8■□□□□ 0.6
COL1A1-202ENST00000463440 MAGEA10P43363 369 aaPredicted RBP18.8■□□□□ 0.6
COL1A1-202ENST00000463440 IRX5P78411 483 aaPredicted RBP18.8■□□□□ 0.6
COL1A1-202ENST00000463440 BEX3Q00994 111 aa18.8■□□□□ 0.6
COL1A1-202ENST00000463440 EXOSC10Q01780 885 aaKnown RBP18.8■□□□□ 0.6
COL1A1-202ENST00000463440 GHRHRQ02643 423 aa18.8■□□□□ 0.6
COL1A1-202ENST00000463440 FSCN1Q16658 493 aaKnown RBP18.8■□□□□ 0.6
COL1A1-202ENST00000463440 ADCK5Q3MIX3 580 aa18.8■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms