RNA–Protein interactions for RNA: ENST00000463066.1

HLA-DPA1-245, Transcript of major histocompatibility complex, class II, DP alpha 1, humanhuman

Gene HLA-DPA1, Length 580 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1-245ENST00000463066 TPCN1Q9ULQ1 816 aa19.29■□□□□ 0.68
HLA-DPA1-245ENST00000463066 V9GY48 417 aaPredicted RBP19.29■□□□□ 0.68
HLA-DPA1-245ENST00000463066 NID2Q14112 1375 aa19.29■□□□□ 0.68
HLA-DPA1-245ENST00000463066 ZNFX1Q9P2E3 1918 aaKnown RBP19.29■□□□□ 0.68
HLA-DPA1-245ENST00000463066 GJB1P08034 283 aa19.28■□□□□ 0.68
HLA-DPA1-245ENST00000463066 IFFO2Q5TF58 517 aa19.28■□□□□ 0.68
HLA-DPA1-245ENST00000463066 ANO1Q5XXA6 986 aa19.28■□□□□ 0.68
HLA-DPA1-245ENST00000463066 ARMCX2Q7L311 632 aa19.28■□□□□ 0.68
HLA-DPA1-245ENST00000463066 CDKN2AIPQ9NXV6 580 aaPredicted RBP19.28■□□□□ 0.68
HLA-DPA1-245ENST00000463066 KIAA0100Q14667 2235 aaKnown RBP19.28■□□□□ 0.68
HLA-DPA1-245ENST00000463066 LARGE1O95461 756 aa19.27■□□□□ 0.68
HLA-DPA1-245ENST00000463066 CFBP00751 764 aa19.27■□□□□ 0.68
HLA-DPA1-245ENST00000463066 CNGA1P29973 690 aa19.27■□□□□ 0.68
HLA-DPA1-245ENST00000463066 HOXA13P31271 388 aaPredicted RBP19.27■□□□□ 0.68
HLA-DPA1-245ENST00000463066 MAMDC4Q6UXC1 1216 aa19.27■□□□□ 0.68
HLA-DPA1-245ENST00000463066 ZNF467Q7Z7K2 595 aaPredicted RBP19.27■□□□□ 0.68
HLA-DPA1-245ENST00000463066 U2AF1L4Q8WU68 220 aaKnown RBP19.27■□□□□ 0.68
HLA-DPA1-245ENST00000463066 PHKBQ93100 1093 aa19.27■□□□□ 0.68
HLA-DPA1-245ENST00000463066 TAAR1Q96RJ0 339 aa19.27■□□□□ 0.68
HLA-DPA1-245ENST00000463066 ALDH8A1Q9H2A2 487 aaPredicted RBP19.27■□□□□ 0.68
HLA-DPA1-245ENST00000463066 SEC63Q9UGP8 760 aaKnown RBP19.27■□□□□ 0.68
HLA-DPA1-245ENST00000463066 LCTP09848 1927 aa19.26■□□□□ 0.67
HLA-DPA1-245ENST00000463066 ZNF865P0CJ78 1059 aaPredicted RBP19.26■□□□□ 0.67
HLA-DPA1-245ENST00000463066 RBM25P49756 843 aaKnown RBP19.26■□□□□ 0.67
HLA-DPA1-245ENST00000463066 ALDH5A1P51649 535 aaPredicted RBP19.26■□□□□ 0.67
HLA-DPA1-245ENST00000463066 NTRK3Q16288 839 aa19.26■□□□□ 0.67
HLA-DPA1-245ENST00000463066 WWC2Q6AWC2 1192 aa19.26■□□□□ 0.67
HLA-DPA1-245ENST00000463066 TYW1BQ6NUM6 668 aa19.26■□□□□ 0.67
HLA-DPA1-245ENST00000463066 HEATR3Q7Z4Q2 680 aa19.26■□□□□ 0.67
HLA-DPA1-245ENST00000463066 RGS22Q8NE09 1264 aa19.26■□□□□ 0.67
HLA-DPA1-245ENST00000463066 LENG1Q96BZ8 264 aaPredicted RBP19.26■□□□□ 0.67
HLA-DPA1-245ENST00000463066 ZNF274Q96GC6 653 aaPredicted RBP19.26■□□□□ 0.67
HLA-DPA1-245ENST00000463066 BACH2Q9BYV9 841 aa19.26■□□□□ 0.67
HLA-DPA1-245ENST00000463066 ZHX1Q9UKY1 873 aaPredicted RBP19.26■□□□□ 0.67
HLA-DPA1-245ENST00000463066 PLXNA1Q9UIW2 1896 aa19.25■□□□□ 0.67
HLA-DPA1-245ENST00000463066 SGPL1O95470 568 aa19.25■□□□□ 0.67
HLA-DPA1-245ENST00000463066 LHX8Q68G74 356 aa19.25■□□□□ 0.67
HLA-DPA1-245ENST00000463066 EEPD1Q7L9B9 569 aa19.25■□□□□ 0.67
HLA-DPA1-245ENST00000463066 MCF2L2Q86YR7 1114 aa19.25■□□□□ 0.67
HLA-DPA1-245ENST00000463066 KATNBL1Q9H079 304 aa19.25■□□□□ 0.67
HLA-DPA1-245ENST00000463066 SYNGAP1Q96PV0 1343 aa19.25■□□□□ 0.67
HLA-DPA1-245ENST00000463066 PTGS1P23219 599 aa19.24■□□□□ 0.67
HLA-DPA1-245ENST00000463066 GJA8P48165 433 aa19.24■□□□□ 0.67
HLA-DPA1-245ENST00000463066 HSD17B4P51659 736 aa19.24■□□□□ 0.67
HLA-DPA1-245ENST00000463066 NECAB1Q8N987 351 aa19.24■□□□□ 0.67
HLA-DPA1-245ENST00000463066 CCDC196A0A1B0GTZ2 297 aa19.23■□□□□ 0.67
HLA-DPA1-245ENST00000463066 ADCY6O43306 1168 aa19.23■□□□□ 0.67
HLA-DPA1-245ENST00000463066 TFRCP02786 760 aaKnown RBP19.23■□□□□ 0.67
HLA-DPA1-245ENST00000463066 GHRHRQ02643 423 aa19.23■□□□□ 0.67
HLA-DPA1-245ENST00000463066 SCRN1Q12765 414 aa19.23■□□□□ 0.67
HLA-DPA1-245ENST00000463066 ACVR2BQ13705 512 aa19.23■□□□□ 0.67
HLA-DPA1-245ENST00000463066 PPP2R5BQ15173 497 aa19.23■□□□□ 0.67
HLA-DPA1-245ENST00000463066 PKN1Q16512 942 aa19.23■□□□□ 0.67
HLA-DPA1-245ENST00000463066 TMEM63BQ5T3F8 832 aa19.23■□□□□ 0.67
HLA-DPA1-245ENST00000463066 USP17L6PQ6QN14 398 aa19.23■□□□□ 0.67
HLA-DPA1-245ENST00000463066 FCHSD1Q86WN1 690 aa19.23■□□□□ 0.67
HLA-DPA1-245ENST00000463066 FBXO16Q8IX29 292 aaPredicted RBP19.23■□□□□ 0.67
HLA-DPA1-245ENST00000463066 MSL3Q8N5Y2 521 aaKnown RBP19.23■□□□□ 0.67
HLA-DPA1-245ENST00000463066 SLC26A6Q9BXS9 759 aa19.23■□□□□ 0.67
HLA-DPA1-245ENST00000463066 CRISPLD2Q9H0B8 497 aa19.23■□□□□ 0.67
HLA-DPA1-245ENST00000463066 PDGFCQ9NRA1 345 aa19.23■□□□□ 0.67
HLA-DPA1-245ENST00000463066 DDX20Q9UHI6 824 aaKnown RBP19.23■□□□□ 0.67
HLA-DPA1-245ENST00000463066 CNPY2Q9Y2B0 182 aa19.23■□□□□ 0.67
HLA-DPA1-245ENST00000463066 MYH6P13533 1939 aa19.22■□□□□ 0.67
HLA-DPA1-245ENST00000463066 ASB14A6NK59 587 aa19.22■□□□□ 0.67
HLA-DPA1-245ENST00000463066 GCOM1H8Y6P7 765 aaPredicted RBP19.22■□□□□ 0.67
HLA-DPA1-245ENST00000463066 STXBP3O00186 592 aa19.22■□□□□ 0.67
HLA-DPA1-245ENST00000463066 ADAMTS3O15072 1205 aa19.22■□□□□ 0.67
HLA-DPA1-245ENST00000463066 PFKFB2O60825 505 aa19.22■□□□□ 0.67
HLA-DPA1-245ENST00000463066 POLR2MP0CAP2 368 aa19.22■□□□□ 0.67
HLA-DPA1-245ENST00000463066 IFNAR1P17181 557 aa19.22■□□□□ 0.67
HLA-DPA1-245ENST00000463066 EIF2AK2P19525 551 aaKnown RBP19.22■□□□□ 0.67
HLA-DPA1-245ENST00000463066 UBE2SQ16763 222 aa19.22■□□□□ 0.67
HLA-DPA1-245ENST00000463066 ME3Q16798 604 aa19.22■□□□□ 0.67
HLA-DPA1-245ENST00000463066 IL31RAQ8NI17 732 aa19.22■□□□□ 0.67
HLA-DPA1-245ENST00000463066 MORC4Q8TE76 937 aa19.22■□□□□ 0.67
HLA-DPA1-245ENST00000463066 ZFP91Q96JP5 570 aaPredicted RBP19.22■□□□□ 0.67
HLA-DPA1-245ENST00000463066 TBC1D32Q96NH3 1257 aa19.22■□□□□ 0.67
HLA-DPA1-245ENST00000463066 SLKQ9H2G2 1235 aaPredicted RBP19.22■□□□□ 0.67
HLA-DPA1-245ENST00000463066 ADD3Q9UEY8 706 aaKnown RBP19.22■□□□□ 0.67
HLA-DPA1-245ENST00000463066 SEPT4O43236 478 aa19.21■□□□□ 0.67
HLA-DPA1-245ENST00000463066 PRPF3O43395 683 aaKnown RBP19.21■□□□□ 0.67
HLA-DPA1-245ENST00000463066 IRX5P78411 483 aaPredicted RBP19.21■□□□□ 0.67
HLA-DPA1-245ENST00000463066 ST3GAL1Q11201 340 aa19.21■□□□□ 0.67
HLA-DPA1-245ENST00000463066 TRAF1Q13077 416 aa19.21■□□□□ 0.67
HLA-DPA1-245ENST00000463066 ANKRD1Q15327 319 aa19.21■□□□□ 0.67
HLA-DPA1-245ENST00000463066 PFKFB3Q16875 520 aaPredicted RBP19.21■□□□□ 0.67
HLA-DPA1-245ENST00000463066 DIS3LQ8TF46 1054 aaKnown RBP19.21■□□□□ 0.67
HLA-DPA1-245ENST00000463066 RMDN3Q96TC7 470 aa19.21■□□□□ 0.67
HLA-DPA1-245ENST00000463066 UPF2Q9HAU5 1272 aaKnown RBP19.21■□□□□ 0.67
HLA-DPA1-245ENST00000463066 NRBP1Q9UHY1 535 aa19.21■□□□□ 0.67
HLA-DPA1-245ENST00000463066 C11orf97A0A1B0GVM6 126 aaPredicted RBP19.2■□□□□ 0.66
HLA-DPA1-245ENST00000463066 MEIS2O14770 477 aa19.2■□□□□ 0.66
HLA-DPA1-245ENST00000463066 CTDNEP1O95476 244 aa19.2■□□□□ 0.66
HLA-DPA1-245ENST00000463066 SCG2P13521 617 aa19.2■□□□□ 0.66
HLA-DPA1-245ENST00000463066 EDNRBP24530 442 aa19.2■□□□□ 0.66
HLA-DPA1-245ENST00000463066 ADCYAP1R1P41586 468 aa19.2■□□□□ 0.66
HLA-DPA1-245ENST00000463066 MNX1P50219 401 aaPredicted RBP19.2■□□□□ 0.66
HLA-DPA1-245ENST00000463066 NAPAP54920 295 aa19.2■□□□□ 0.66
HLA-DPA1-245ENST00000463066 CCDC144BQ3MJ40 725 aa19.2■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms