RNA–Protein interactions for RNA: ENST00000463048.3

NUP43-205, Transcript of nucleoporin 43, humanhuman

TSL 3

Gene NUP43, Length 523 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43-205ENST00000463048 CTDNEP1O95476 244 aa23.36■■□□□ 1.33
NUP43-205ENST00000463048 INHAP05111 366 aa23.36■■□□□ 1.33
NUP43-205ENST00000463048 HOXC6P09630 235 aa23.36■■□□□ 1.33
NUP43-205ENST00000463048 XRCC5P13010 732 aaKnown RBP23.36■■□□□ 1.33
NUP43-205ENST00000463048 SCG2P13521 617 aa23.36■■□□□ 1.33
NUP43-205ENST00000463048 ST3GAL1Q11201 340 aa23.36■■□□□ 1.33
NUP43-205ENST00000463048 PKN1Q16512 942 aa23.36■■□□□ 1.33
NUP43-205ENST00000463048 DHX30Q7L2E3 1194 aaKnown RBP eCLIP23.36■■□□□ 1.33
NUP43-205ENST00000463048 ZSCAN31Q96LW9 406 aaPredicted RBP23.36■■□□□ 1.33
NUP43-205ENST00000463048 RNF26Q9BY78 433 aaPredicted RBP23.36■■□□□ 1.33
NUP43-205ENST00000463048 STXBP3O00186 592 aa23.35■■□□□ 1.33
NUP43-205ENST00000463048 CDKL5O76039 1030 aa23.35■■□□□ 1.33
NUP43-205ENST00000463048 PFKFB3Q16875 520 aaPredicted RBP23.35■■□□□ 1.33
NUP43-205ENST00000463048 TYW1BQ6NUM6 668 aa23.35■■□□□ 1.33
NUP43-205ENST00000463048 FAM133AQ8N9E0 248 aa23.35■■□□□ 1.33
NUP43-205ENST00000463048 PXYLP1Q8TE99 480 aa23.35■■□□□ 1.33
NUP43-205ENST00000463048 FGD4Q96M96 766 aa23.35■■□□□ 1.33
NUP43-205ENST00000463048 AIFM3Q96NN9 605 aa23.35■■□□□ 1.33
NUP43-205ENST00000463048 COL20A1Q9P218 1284 aa23.35■■□□□ 1.33
NUP43-205ENST00000463048 LCTP09848 1927 aa23.34■■□□□ 1.33
NUP43-205ENST00000463048 JAK2O60674 1132 aa23.34■■□□□ 1.33
NUP43-205ENST00000463048 HMGCRP04035 888 aa23.34■■□□□ 1.33
NUP43-205ENST00000463048 FOSBP53539 338 aa23.34■■□□□ 1.33
NUP43-205ENST00000463048 PRAMEF19Q5SWL8 479 aa23.34■■□□□ 1.33
NUP43-205ENST00000463048 FCHSD1Q86WN1 690 aa23.34■■□□□ 1.33
NUP43-205ENST00000463048 SYTL5Q8TDW5 730 aaPredicted RBP23.34■■□□□ 1.33
NUP43-205ENST00000463048 TAAR1Q96RJ0 339 aa23.34■■□□□ 1.33
NUP43-205ENST00000463048 ASTN1O14525 1302 aa23.33■■□□□ 1.33
NUP43-205ENST00000463048 GCOM1H8Y6P7 765 aaPredicted RBP23.33■■□□□ 1.33
NUP43-205ENST00000463048 POLR2MP0CAP2 368 aa23.33■■□□□ 1.33
NUP43-205ENST00000463048 UBE2SQ16763 222 aa23.33■■□□□ 1.33
NUP43-205ENST00000463048 MFSD14CQ5VZR4 134 aa23.33■■□□□ 1.33
NUP43-205ENST00000463048 USP17L6PQ6QN14 398 aa23.33■■□□□ 1.33
NUP43-205ENST00000463048 PSTPIP2Q9H939 334 aa23.33■■□□□ 1.33
NUP43-205ENST00000463048 BARHL2Q9NY43 387 aa23.33■■□□□ 1.33
NUP43-205ENST00000463048 VPS54Q9P1Q0 977 aa23.33■■□□□ 1.33
NUP43-205ENST00000463048 PRKAR2AP13861 404 aaKnown RBP23.32■■□□□ 1.32
NUP43-205ENST00000463048 MTFR1Q15390 333 aa23.32■■□□□ 1.32
NUP43-205ENST00000463048 TRMT44Q8IYL2 757 aaKnown RBP23.32■■□□□ 1.32
NUP43-205ENST00000463048 RGS22Q8NE09 1264 aa23.32■■□□□ 1.32
NUP43-205ENST00000463048 NSUN7Q8NE18 718 aaKnown RBP23.32■■□□□ 1.32
NUP43-205ENST00000463048 SMARCC2Q8TAQ2 1214 aa23.32■■□□□ 1.32
NUP43-205ENST00000463048 ABHD8Q96I13 439 aa23.32■■□□□ 1.32
NUP43-205ENST00000463048 TMX3Q96JJ7 454 aa23.32■■□□□ 1.32
NUP43-205ENST00000463048 TINF2Q9BSI4 451 aa23.32■■□□□ 1.32
NUP43-205ENST00000463048 SH2B1Q9NRF2 756 aaPredicted RBP23.32■■□□□ 1.32
NUP43-205ENST00000463048 RBM27Q9P2N5 1060 aaKnown RBP23.32■■□□□ 1.32
NUP43-205ENST00000463048 ORC3Q9UBD5 711 aaPredicted RBP23.32■■□□□ 1.32
NUP43-205ENST00000463048 SMCO2A6NFE2 343 aa23.31■■□□□ 1.32
NUP43-205ENST00000463048 DEXIO95424 95 aa23.31■■□□□ 1.32
NUP43-205ENST00000463048 HSD17B4P51659 736 aa23.31■■□□□ 1.32
NUP43-205ENST00000463048 UBXN2AP68543 259 aa23.31■■□□□ 1.32
NUP43-205ENST00000463048 CACNB2Q08289 660 aaPredicted RBP23.31■■□□□ 1.32
NUP43-205ENST00000463048 OLFML2BQ68BL8 750 aa23.31■■□□□ 1.32
NUP43-205ENST00000463048 CUL5Q93034 780 aa23.31■■□□□ 1.32
NUP43-205ENST00000463048 DIS3Q9Y2L1 958 aaKnown RBP23.31■■□□□ 1.32
NUP43-205ENST00000463048 HTTP42858 3142 aa23.31■■□□□ 1.32
NUP43-205ENST00000463048 EIF2AK2P19525 551 aaKnown RBP23.3■■□□□ 1.32
NUP43-205ENST00000463048 CNGA1P29973 690 aa23.3■■□□□ 1.32
NUP43-205ENST00000463048 ALDH5A1P51649 535 aaPredicted RBP23.3■■□□□ 1.32
NUP43-205ENST00000463048 ADCY7P51828 1080 aa23.3■■□□□ 1.32
NUP43-205ENST00000463048 ARMCX2Q7L311 632 aa23.3■■□□□ 1.32
NUP43-205ENST00000463048 EEPD1Q7L9B9 569 aa23.3■■□□□ 1.32
NUP43-205ENST00000463048 ZNF333Q96JL9 665 aa23.3■■□□□ 1.32
NUP43-205ENST00000463048 UNC93B1Q9H1C4 597 aa23.3■■□□□ 1.32
NUP43-205ENST00000463048 ADD3Q9UEY8 706 aaKnown RBP23.3■■□□□ 1.32
NUP43-205ENST00000463048 hCG_1984214I3L0E3 225 aa23.29■■□□□ 1.32
NUP43-205ENST00000463048 CCL5P13501 91 aa23.29■■□□□ 1.32
NUP43-205ENST00000463048 CCND3P30281 292 aaPredicted RBP23.29■■□□□ 1.32
NUP43-205ENST00000463048 ARHGEF16Q5VV41 709 aa23.29■■□□□ 1.32
NUP43-205ENST00000463048 ZNF713Q8N859 430 aaPredicted RBP23.29■■□□□ 1.32
NUP43-205ENST00000463048 ARMC5Q96C12 935 aa23.29■■□□□ 1.32
NUP43-205ENST00000463048 SHISA4Q96DD7 197 aa23.29■■□□□ 1.32
NUP43-205ENST00000463048 RMDN3Q96TC7 470 aa23.29■■□□□ 1.32
NUP43-205ENST00000463048 GJB4Q9NTQ9 266 aa23.29■■□□□ 1.32
NUP43-205ENST00000463048 MCM3APO60318 1980 aa23.29■■□□□ 1.32
NUP43-205ENST00000463048 MEIS2O14770 477 aa23.28■■□□□ 1.32
NUP43-205ENST00000463048 ADAMTS3O15072 1205 aa23.28■■□□□ 1.32
NUP43-205ENST00000463048 SNAI1O95863 264 aaPredicted RBP23.28■■□□□ 1.32
NUP43-205ENST00000463048 FDPSP14324 419 aaKnown RBP23.28■■□□□ 1.32
NUP43-205ENST00000463048 MCM2P49736 904 aa23.28■■□□□ 1.32
NUP43-205ENST00000463048 PPP1R18Q6NYC8 613 aa23.28■■□□□ 1.32
NUP43-205ENST00000463048 TRPV1Q8NER1 839 aa23.28■■□□□ 1.32
NUP43-205ENST00000463048 ZFP91Q96JP5 570 aaPredicted RBP23.28■■□□□ 1.32
NUP43-205ENST00000463048 PGBD1Q96JS3 809 aa23.28■■□□□ 1.32
NUP43-205ENST00000463048 ALG1Q9BT22 464 aa23.28■■□□□ 1.32
NUP43-205ENST00000463048 TMEM260Q9NX78 707 aa23.28■■□□□ 1.32
NUP43-205ENST00000463048 CDKN2AIPQ9NXV6 580 aaPredicted RBP23.28■■□□□ 1.32
NUP43-205ENST00000463048 ZHX1Q9UKY1 873 aaPredicted RBP23.28■■□□□ 1.32
NUP43-205ENST00000463048 STK36Q9NRP7 1315 aa23.28■■□□□ 1.32
NUP43-205ENST00000463048 ASB14A6NK59 587 aa23.27■■□□□ 1.32
NUP43-205ENST00000463048 CCDC85CA6NKD9 419 aa23.27■■□□□ 1.32
NUP43-205ENST00000463048 NLRP5P59047 1200 aa23.27■■□□□ 1.32
NUP43-205ENST00000463048 PDE4DQ08499 809 aa23.27■■□□□ 1.32
NUP43-205ENST00000463048 ZNF467Q7Z7K2 595 aaPredicted RBP23.27■■□□□ 1.32
NUP43-205ENST00000463048 RNF208Q9H0X6 261 aa23.27■■□□□ 1.32
NUP43-205ENST00000463048 RIC8AQ9NPQ8 531 aa23.27■■□□□ 1.32
NUP43-205ENST00000463048 KCNJ14Q9UNX9 436 aa23.27■■□□□ 1.32
NUP43-205ENST00000463048 CNPY2Q9Y2B0 182 aa23.27■■□□□ 1.32
NUP43-205ENST00000463048 MYCLP12524 364 aaPredicted RBP23.26■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms