RNA–Protein interactions for RNA: ENST00000463011.5

GPNMB-205, Transcript of glycoprotein nmb, humanhuman

TSL 3

Gene GPNMB, Length 378 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-205ENST00000463011 COQ6Q9Y2Z9 468 aa5.02□□□□□ -1.61
GPNMB-205ENST00000463011 ST14Q9Y5Y6 855 aa5.02□□□□□ -1.61
GPNMB-205ENST00000463011 FAM181BA6NEQ2 426 aa5.01□□□□□ -1.61
GPNMB-205ENST00000463011 TRAF5O00463 557 aa5.01□□□□□ -1.61
GPNMB-205ENST00000463011 AURKAO14965 403 aa5.01□□□□□ -1.61
GPNMB-205ENST00000463011 MEFVO15553 781 aaPredicted RBP5.01□□□□□ -1.61
GPNMB-205ENST00000463011 GAS7O60861 476 aa5.01□□□□□ -1.61
GPNMB-205ENST00000463011 MYL1P05976 194 aa5.01□□□□□ -1.61
GPNMB-205ENST00000463011 GSNP06396 782 aa5.01□□□□□ -1.61
GPNMB-205ENST00000463011 CKMP06732 381 aa5.01□□□□□ -1.61
GPNMB-205ENST00000463011 MYBL2P10244 700 aa5.01□□□□□ -1.61
GPNMB-205ENST00000463011 ELNP15502 786 aa5.01□□□□□ -1.61
GPNMB-205ENST00000463011 GLB1P16278 677 aa5.01□□□□□ -1.61
GPNMB-205ENST00000463011 RXRBP28702 533 aa5.01□□□□□ -1.61
GPNMB-205ENST00000463011 GRIK4Q16099 956 aa5.01□□□□□ -1.61
GPNMB-205ENST00000463011 ABCB5Q2M3G0 1257 aa5.01□□□□□ -1.61
GPNMB-205ENST00000463011 ATP13A4Q4VNC1 1196 aa5.01□□□□□ -1.61
GPNMB-205ENST00000463011 SGO2Q562F6 1265 aa5.01□□□□□ -1.61
GPNMB-205ENST00000463011 SYCP2LQ5T4T6 812 aa5.01□□□□□ -1.61
GPNMB-205ENST00000463011 CRTC3Q6UUV7 619 aa5.01□□□□□ -1.61
GPNMB-205ENST00000463011 RSPO2Q6UXX9 243 aaPredicted RBP5.01□□□□□ -1.61
GPNMB-205ENST00000463011 LINC00114Q6XXX2 140 aa5.01□□□□□ -1.61
GPNMB-205ENST00000463011 TCEAL8Q8IYN2 117 aa5.01□□□□□ -1.61
GPNMB-205ENST00000463011 DTWD2Q8NBA8 298 aa5.01□□□□□ -1.61
GPNMB-205ENST00000463011 PCDH19Q8TAB3 1148 aa5.01□□□□□ -1.61
GPNMB-205ENST00000463011 CHTF18Q8WVB6 975 aa5.01□□□□□ -1.61
GPNMB-205ENST00000463011 Q96M66 194 aa5.01□□□□□ -1.61
GPNMB-205ENST00000463011 YIPF2Q9BWQ6 316 aa5.01□□□□□ -1.61
GPNMB-205ENST00000463011 AKTIPQ9H8T0 292 aa5.01□□□□□ -1.61
GPNMB-205ENST00000463011 CABP5Q9NP86 173 aa5.01□□□□□ -1.61
GPNMB-205ENST00000463011 KCNH3Q9ULD8 1083 aa5.01□□□□□ -1.61
GPNMB-205ENST00000463011 BACE2Q9Y5Z0 518 aa5.01□□□□□ -1.61
GPNMB-205ENST00000463011 SHISA3A0PJX4 238 aa5□□□□□ -1.61
GPNMB-205ENST00000463011 GOLGA6CA6NDK9 693 aa5□□□□□ -1.61
GPNMB-205ENST00000463011 GOLGA6BA6NDN3 693 aa5□□□□□ -1.61
GPNMB-205ENST00000463011 ARVCFO00192 962 aa5□□□□□ -1.61
GPNMB-205ENST00000463011 LEFTY1O75610 366 aa5□□□□□ -1.61
GPNMB-205ENST00000463011 EIF3JO75822 258 aaKnown RBP5□□□□□ -1.61
GPNMB-205ENST00000463011 ABLIM3O94929 683 aa5□□□□□ -1.61
GPNMB-205ENST00000463011 MT-CO1P00395 513 aa5□□□□□ -1.61
GPNMB-205ENST00000463011 GOLGA6DP0CG33 693 aa5□□□□□ -1.61
GPNMB-205ENST00000463011 LCP1P13796 627 aa5□□□□□ -1.61
GPNMB-205ENST00000463011 PLS3P13797 630 aa5□□□□□ -1.61
GPNMB-205ENST00000463011 IFNGR1P15260 489 aa5□□□□□ -1.61
GPNMB-205ENST00000463011 CCND1P24385 295 aa5□□□□□ -1.61
GPNMB-205ENST00000463011 LTBRP36941 435 aa5□□□□□ -1.61
GPNMB-205ENST00000463011 CTSKP43235 329 aa5□□□□□ -1.61
GPNMB-205ENST00000463011 NOP2P46087 812 aaKnown RBP5□□□□□ -1.61
GPNMB-205ENST00000463011 DNM2P50570 870 aa5□□□□□ -1.61
GPNMB-205ENST00000463011 SNRPNP63162 240 aaKnown RBP5□□□□□ -1.61
GPNMB-205ENST00000463011 PAK1Q13153 545 aa5□□□□□ -1.61
GPNMB-205ENST00000463011 OS9Q13438 667 aaPredicted RBP5□□□□□ -1.61
GPNMB-205ENST00000463011 TCIRG1Q13488 830 aa5□□□□□ -1.61
GPNMB-205ENST00000463011 HDAC1Q13547 482 aaPredicted RBP5□□□□□ -1.61
GPNMB-205ENST00000463011 CLEC16AQ2KHT3 1053 aa5□□□□□ -1.61
GPNMB-205ENST00000463011 SFRP5Q5T4F7 317 aa5□□□□□ -1.61
GPNMB-205ENST00000463011 ACBD5Q5T8D3 534 aaPredicted RBP5□□□□□ -1.61
GPNMB-205ENST00000463011 NXNQ6DKJ4 435 aa5□□□□□ -1.61
GPNMB-205ENST00000463011 LBX2Q6XYB7 198 aa5□□□□□ -1.61
GPNMB-205ENST00000463011 HDGFL2Q7Z4V5 671 aaPredicted RBP5□□□□□ -1.61
GPNMB-205ENST00000463011 KRTAP1-3Q8IUG1 177 aa5□□□□□ -1.61
GPNMB-205ENST00000463011 CCDC103Q8IW40 242 aa5□□□□□ -1.61
GPNMB-205ENST00000463011 TPH2Q8IWU9 490 aa5□□□□□ -1.61
GPNMB-205ENST00000463011 MAGEB6Q8N7X4 407 aa5□□□□□ -1.61
GPNMB-205ENST00000463011 PUM2Q8TB72 1066 aaKnown RBP eCLIP5□□□□□ -1.61
GPNMB-205ENST00000463011 FUBP3Q96I24 572 aaKnown RBP eCLIP5□□□□□ -1.61
GPNMB-205ENST00000463011 FCRL3Q96P31 734 aaPredicted RBP5□□□□□ -1.61
GPNMB-205ENST00000463011 CAMKK2Q96RR4 588 aa5□□□□□ -1.61
GPNMB-205ENST00000463011 UBL7Q96S82 380 aaPredicted RBP5□□□□□ -1.61
GPNMB-205ENST00000463011 MPHOSPH6Q99547 160 aaKnown RBP5□□□□□ -1.61
GPNMB-205ENST00000463011 ZFYVE21Q9BQ24 234 aa5□□□□□ -1.61
GPNMB-205ENST00000463011 PCGF6Q9BYE7 350 aa5□□□□□ -1.61
GPNMB-205ENST00000463011 CEP41Q9BYV8 373 aa5□□□□□ -1.61
GPNMB-205ENST00000463011 RHOBTB2Q9BYZ6 727 aa5□□□□□ -1.61
GPNMB-205ENST00000463011 LUC7LQ9NQ29 371 aaKnown RBP5□□□□□ -1.61
GPNMB-205ENST00000463011 CHST12Q9NRB3 414 aa5□□□□□ -1.61
GPNMB-205ENST00000463011 GPR27Q9NS67 375 aa5□□□□□ -1.61
GPNMB-205ENST00000463011 SPTLC3Q9NUV7 552 aa5□□□□□ -1.61
GPNMB-205ENST00000463011 GOLGA6AQ9NYA3 693 aa5□□□□□ -1.61
GPNMB-205ENST00000463011 CLEC1BQ9P126 229 aa5□□□□□ -1.61
GPNMB-205ENST00000463011 B4GALT6Q9UBX8 382 aa5□□□□□ -1.61
GPNMB-205ENST00000463011 LUC7L2Q9Y383 392 aaKnown RBP5□□□□□ -1.61
GPNMB-205ENST00000463011 NPFFR2Q9Y5X5 522 aa5□□□□□ -1.61
GPNMB-205ENST00000463011 RFPL1O75677 317 aa4.99□□□□□ -1.61
GPNMB-205ENST00000463011 CT47B1P0C2W7 299 aaPredicted RBP4.99□□□□□ -1.61
GPNMB-205ENST00000463011 ATP2A2P16615 1042 aaKnown RBP4.99□□□□□ -1.61
GPNMB-205ENST00000463011 IARSP41252 1262 aaKnown RBP4.99□□□□□ -1.61
GPNMB-205ENST00000463011 LSSP48449 732 aa4.99□□□□□ -1.61
GPNMB-205ENST00000463011 SEPHS1P49903 392 aa4.99□□□□□ -1.61
GPNMB-205ENST00000463011 HLTFQ14527 1009 aaKnown RBP eCLIP4.99□□□□□ -1.61
GPNMB-205ENST00000463011 PCBP2Q15366 365 aaKnown RBP eCLIP4.99□□□□□ -1.61
GPNMB-205ENST00000463011 GFOD2Q3B7J2 385 aa4.99□□□□□ -1.61
GPNMB-205ENST00000463011 TMEM177Q53S58 311 aa4.99□□□□□ -1.61
GPNMB-205ENST00000463011 SEZ6L2Q6UXD5 910 aa4.99□□□□□ -1.61
GPNMB-205ENST00000463011 C11orf74Q86VG3 221 aa4.99□□□□□ -1.61
GPNMB-205ENST00000463011 CBARPQ8N350 705 aaPredicted RBP4.99□□□□□ -1.61
GPNMB-205ENST00000463011 EZH1Q92800 747 aaPredicted RBP4.99□□□□□ -1.61
GPNMB-205ENST00000463011 DIO2Q92813 273 aa4.99□□□□□ -1.61
GPNMB-205ENST00000463011 ALG1Q9BT22 464 aa4.99□□□□□ -1.61
GPNMB-205ENST00000463011 MENTQ9BUN1 341 aa4.99□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms