RNA–Protein interactions for RNA: ENST00000462899.1

SMC3-202, Transcript of structural maintenance of chromosomes 3, humanhuman

TSL 5

Gene SMC3, Length 777 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC3-202ENST00000462899 TTF1Q15361 905 aaPredicted RBP9.29□□□□□ -0.92
SMC3-202ENST00000462899 SLFNL1Q499Z3 407 aa9.29□□□□□ -0.92
SMC3-202ENST00000462899 SPRED2Q7Z698 418 aa9.29□□□□□ -0.92
SMC3-202ENST00000462899 TLK2Q86UE8 772 aa9.29□□□□□ -0.92
SMC3-202ENST00000462899 ALYREFQ86V81 257 aaKnown RBP9.29□□□□□ -0.92
SMC3-202ENST00000462899 ZNF687Q8N1G0 1237 aa9.29□□□□□ -0.92
SMC3-202ENST00000462899 DDX11Q96FC9 970 aa9.29□□□□□ -0.92
SMC3-202ENST00000462899 SCLYQ96I15 445 aa9.29□□□□□ -0.92
SMC3-202ENST00000462899 NUP88Q99567 741 aaPredicted RBP9.29□□□□□ -0.92
SMC3-202ENST00000462899 ADAM33Q9BZ11 813 aa9.29□□□□□ -0.92
SMC3-202ENST00000462899 C1orf115Q9H7X2 142 aa9.29□□□□□ -0.92
SMC3-202ENST00000462899 ARMT1Q9H993 441 aa9.29□□□□□ -0.92
SMC3-202ENST00000462899 NLRC5Q86WI3 1866 aa9.29□□□□□ -0.92
SMC3-202ENST00000462899 MICAL3Q7RTP6 2002 aa9.29□□□□□ -0.92
SMC3-202ENST00000462899 IGKV6D-41A0A0C4DH26 115 aa9.28□□□□□ -0.92
SMC3-202ENST00000462899 PRR33A8MZF0 331 aa9.28□□□□□ -0.92
SMC3-202ENST00000462899 NDUFB10O96000 172 aa9.28□□□□□ -0.92
SMC3-202ENST00000462899 SMPD1P17405 629 aa9.28□□□□□ -0.92
SMC3-202ENST00000462899 ADD2P35612 726 aa9.28□□□□□ -0.92
SMC3-202ENST00000462899 OAZ1P54368 228 aa9.28□□□□□ -0.92
SMC3-202ENST00000462899 CNTN2Q02246 1040 aa9.28□□□□□ -0.92
SMC3-202ENST00000462899 GRB10Q13322 594 aa9.28□□□□□ -0.92
SMC3-202ENST00000462899 FSCN1Q16658 493 aaKnown RBP9.28□□□□□ -0.92
SMC3-202ENST00000462899 TMEM67Q5HYA8 995 aa9.28□□□□□ -0.92
SMC3-202ENST00000462899 RPUSD2Q8IZ73 545 aaKnown RBP9.28□□□□□ -0.92
SMC3-202ENST00000462899 PRPF38AQ8NAV1 312 aaKnown RBP9.28□□□□□ -0.92
SMC3-202ENST00000462899 CHST13Q8NET6 341 aa9.28□□□□□ -0.92
SMC3-202ENST00000462899 HLA-CQ95604 372 aa9.28□□□□□ -0.92
SMC3-202ENST00000462899 CLUAP1Q96AJ1 413 aa9.28□□□□□ -0.92
SMC3-202ENST00000462899 VTI1AQ96AJ9 217 aa9.28□□□□□ -0.92
SMC3-202ENST00000462899 SLC9A7Q96T83 725 aa9.28□□□□□ -0.92
SMC3-202ENST00000462899 ALDH8A1Q9H2A2 487 aaPredicted RBP9.28□□□□□ -0.92
SMC3-202ENST00000462899 NYAP2Q9P242 653 aa9.28□□□□□ -0.92
SMC3-202ENST00000462899 VPS13AQ96RL7 3174 aa9.28□□□□□ -0.92
SMC3-202ENST00000462899 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP9.27□□□□□ -0.93
SMC3-202ENST00000462899 SOWAHBA6NEL2 793 aa9.27□□□□□ -0.93
SMC3-202ENST00000462899 USP17L12C9JPN9 530 aa9.27□□□□□ -0.93
SMC3-202ENST00000462899 USP17L21D6R901 530 aa9.27□□□□□ -0.93
SMC3-202ENST00000462899 F5H6K3 240 aa9.27□□□□□ -0.93
SMC3-202ENST00000462899 IPO8O15397 1037 aaKnown RBP9.27□□□□□ -0.93
SMC3-202ENST00000462899 MBD4O95243 580 aa9.27□□□□□ -0.93
SMC3-202ENST00000462899 CHGBP05060 677 aa9.27□□□□□ -0.93
SMC3-202ENST00000462899 RASA1P20936 1047 aa9.27□□□□□ -0.93
SMC3-202ENST00000462899 PSEN2P49810 448 aa9.27□□□□□ -0.93
SMC3-202ENST00000462899 PSMC6P62333 389 aa9.27□□□□□ -0.93
SMC3-202ENST00000462899 TNFAIP2Q03169 654 aa9.27□□□□□ -0.93
SMC3-202ENST00000462899 KLRC3Q07444 240 aa9.27□□□□□ -0.93
SMC3-202ENST00000462899 SKIV2LQ15477 1246 aaKnown RBP9.27□□□□□ -0.93
SMC3-202ENST00000462899 TMEM63BQ5T3F8 832 aa9.27□□□□□ -0.93
SMC3-202ENST00000462899 TAPT1Q6NXT6 567 aa9.27□□□□□ -0.93
SMC3-202ENST00000462899 CEP85Q6P2H3 762 aa9.27□□□□□ -0.93
SMC3-202ENST00000462899 CTR9Q6PD62 1173 aa9.27□□□□□ -0.93
SMC3-202ENST00000462899 AACSQ86V21 672 aa9.27□□□□□ -0.93
SMC3-202ENST00000462899 PHOSPHO2Q8TCD6 241 aa9.27□□□□□ -0.93
SMC3-202ENST00000462899 ZDHHC16Q969W1 377 aa9.27□□□□□ -0.93
SMC3-202ENST00000462899 KCNK17Q96T54 332 aa9.27□□□□□ -0.93
SMC3-202ENST00000462899 CERS4Q9HA82 394 aa9.27□□□□□ -0.93
SMC3-202ENST00000462899 RAVER2Q9HCJ3 691 aaKnown RBP9.27□□□□□ -0.93
SMC3-202ENST00000462899 A1CFQ9NQ94 594 aaKnown RBP9.27□□□□□ -0.93
SMC3-202ENST00000462899 FBXO40Q9UH90 709 aa9.27□□□□□ -0.93
SMC3-202ENST00000462899 Q9Y3F1 56 aa9.27□□□□□ -0.93
SMC3-202ENST00000462899 SPTBN4Q9H254 2564 aa9.27□□□□□ -0.93
SMC3-202ENST00000462899 ZNF536O15090 1300 aa9.27□□□□□ -0.93
SMC3-202ENST00000462899 COL4A6Q14031 1691 aa9.26□□□□□ -0.93
SMC3-202ENST00000462899 PLIN4Q96Q06 1357 aa9.26□□□□□ -0.93
SMC3-202ENST00000462899 TECTAO75443 2155 aa9.26□□□□□ -0.93
SMC3-202ENST00000462899 RALGAPA2Q2PPJ7 1873 aa9.26□□□□□ -0.93
SMC3-202ENST00000462899 ZBBXA8MT70 800 aa9.26□□□□□ -0.93
SMC3-202ENST00000462899 GOLIM4O00461 696 aa9.26□□□□□ -0.93
SMC3-202ENST00000462899 MRE11P49959 708 aa9.26□□□□□ -0.93
SMC3-202ENST00000462899 TYW1BQ6NUM6 668 aa9.26□□□□□ -0.93
SMC3-202ENST00000462899 HERC6Q8IVU3 1022 aa9.26□□□□□ -0.93
SMC3-202ENST00000462899 ANKRD35Q8N283 1001 aa9.26□□□□□ -0.93
SMC3-202ENST00000462899 MORC4Q8TE76 937 aa9.26□□□□□ -0.93
SMC3-202ENST00000462899 MKL1Q969V6 931 aa9.26□□□□□ -0.93
SMC3-202ENST00000462899 SNX27Q96L92 541 aa9.26□□□□□ -0.93
SMC3-202ENST00000462899 KRTAP3-3Q9BYR6 98 aa9.26□□□□□ -0.93
SMC3-202ENST00000462899 KRTAP3-2Q9BYR7 98 aa9.26□□□□□ -0.93
SMC3-202ENST00000462899 TRMT13Q9NUP7 481 aaKnown RBP9.26□□□□□ -0.93
SMC3-202ENST00000462899 LMCD1Q9NZU5 365 aa9.26□□□□□ -0.93
SMC3-202ENST00000462899 EXOC6BQ9Y2D4 811 aa9.26□□□□□ -0.93
SMC3-202ENST00000462899 DDX49Q9Y6V7 483 aaKnown RBP9.26□□□□□ -0.93
SMC3-202ENST00000462899 KIAA1217Q5T5P2 1943 aa9.26□□□□□ -0.93
SMC3-202ENST00000462899 TNKSO95271 1327 aa9.26□□□□□ -0.93
SMC3-202ENST00000462899 KMT2EQ8IZD2 1858 aa9.25□□□□□ -0.93
SMC3-202ENST00000462899 CYP2C9P11712 490 aa9.25□□□□□ -0.93
SMC3-202ENST00000462899 RLBP1P12271 317 aa9.25□□□□□ -0.93
SMC3-202ENST00000462899 RFC2P35250 354 aa9.25□□□□□ -0.93
SMC3-202ENST00000462899 PURAQ00577 322 aaKnown RBP9.25□□□□□ -0.93
SMC3-202ENST00000462899 NHLH1Q02575 133 aa9.25□□□□□ -0.93
SMC3-202ENST00000462899 ERC1Q8IUD2 1116 aa9.25□□□□□ -0.93
SMC3-202ENST00000462899 FAM178BQ8IXR5 827 aa9.25□□□□□ -0.93
SMC3-202ENST00000462899 CPXCR1Q8N123 301 aa9.25□□□□□ -0.93
SMC3-202ENST00000462899 ARNTL2Q8WYA1 636 aa9.25□□□□□ -0.93
SMC3-202ENST00000462899 PDGFCQ9NRA1 345 aa9.25□□□□□ -0.93
SMC3-202ENST00000462899 SYNPO2Q9UMS6 1093 aa9.25□□□□□ -0.93
SMC3-202ENST00000462899 CACNA1HO95180 2353 aa9.25□□□□□ -0.93
SMC3-202ENST00000462899 ZDBF2Q9HCK1 2354 aa9.25□□□□□ -0.93
SMC3-202ENST00000462899 MYO7AQ13402 2215 aa9.25□□□□□ -0.93
SMC3-202ENST00000462899 LCHNA4D1U4 455 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms