RNA–Protein interactions for RNA: ENST00000462254.1

CSMD3-205, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 2

Gene CSMD3, Length 457 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-205ENST00000462254 SLC52A2Q9HAB3 445 aa5.83□□□□□ -1.48
CSMD3-205ENST00000462254 RAD18Q9NS91 495 aa5.83□□□□□ -1.48
CSMD3-205ENST00000462254 TMEM260Q9NX78 707 aa5.83□□□□□ -1.48
CSMD3-205ENST00000462254 MIS18AQ9NYP9 233 aa5.83□□□□□ -1.48
CSMD3-205ENST00000462254 RGS17Q9UGC6 210 aaPredicted RBP5.83□□□□□ -1.48
CSMD3-205ENST00000462254 PRKAG3Q9UGI9 489 aa5.83□□□□□ -1.48
CSMD3-205ENST00000462254 PPP1R9AQ9ULJ8 1098 aa5.83□□□□□ -1.48
CSMD3-205ENST00000462254 EFR3BQ9Y2G0 817 aa5.83□□□□□ -1.48
CSMD3-205ENST00000462254 MSRB2Q9Y3D2 182 aa5.83□□□□□ -1.48
CSMD3-205ENST00000462254 MRVI1Q9Y6F6 885 aa5.83□□□□□ -1.48
CSMD3-205ENST00000462254 NUP98P52948 1817 aa5.83□□□□□ -1.48
CSMD3-205ENST00000462254 TUBGCP6Q96RT7 1819 aa5.83□□□□□ -1.48
CSMD3-205ENST00000462254 ESYT3A0FGR9 886 aa5.82□□□□□ -1.48
CSMD3-205ENST00000462254 F6X3S4 739 aa5.82□□□□□ -1.48
CSMD3-205ENST00000462254 SART1O43290 800 aaKnown RBP5.82□□□□□ -1.48
CSMD3-205ENST00000462254 KCNQ3O43525 872 aa5.82□□□□□ -1.48
CSMD3-205ENST00000462254 HSP90AB1P08238 724 aaKnown RBP5.82□□□□□ -1.48
CSMD3-205ENST00000462254 BMP3P12645 472 aa5.82□□□□□ -1.48
CSMD3-205ENST00000462254 ITGB7P26010 798 aa5.82□□□□□ -1.48
CSMD3-205ENST00000462254 MASP1P48740 699 aa5.82□□□□□ -1.48
CSMD3-205ENST00000462254 TEFQ10587 303 aa5.82□□□□□ -1.48
CSMD3-205ENST00000462254 TAF7Q15545 349 aaPredicted RBP5.82□□□□□ -1.48
CSMD3-205ENST00000462254 SGO2Q562F6 1265 aa5.82□□□□□ -1.48
CSMD3-205ENST00000462254 CCSAPQ6IQ19 270 aaPredicted RBP5.82□□□□□ -1.48
CSMD3-205ENST00000462254 PRR23CQ6ZRP0 262 aa5.82□□□□□ -1.48
CSMD3-205ENST00000462254 C16orf86Q6ZW13 317 aa5.82□□□□□ -1.48
CSMD3-205ENST00000462254 LILRB2Q8N423 598 aa5.82□□□□□ -1.48
CSMD3-205ENST00000462254 TSPYL6Q8N831 410 aa5.82□□□□□ -1.48
CSMD3-205ENST00000462254 MARCH10Q8NA82 808 aaPredicted RBP5.82□□□□□ -1.48
CSMD3-205ENST00000462254 SGSM3Q96HU1 749 aa5.82□□□□□ -1.48
CSMD3-205ENST00000462254 MYRFLQ96LU7 910 aa5.82□□□□□ -1.48
CSMD3-205ENST00000462254 GINM1Q9NU53 330 aa5.82□□□□□ -1.48
CSMD3-205ENST00000462254 CACNA2D2Q9NY47 1150 aa5.82□□□□□ -1.48
CSMD3-205ENST00000462254 ADAMTS1Q9UHI8 967 aa5.82□□□□□ -1.48
CSMD3-205ENST00000462254 TSPYL4Q9UJ04 414 aa5.82□□□□□ -1.48
CSMD3-205ENST00000462254 R3HCC1Q9Y3T6 440 aaKnown RBP5.82□□□□□ -1.48
CSMD3-205ENST00000462254 RGPD3A6NKT7 1758 aaPredicted RBP5.82□□□□□ -1.48
CSMD3-205ENST00000462254 RGPD4Q7Z3J3 1758 aa5.82□□□□□ -1.48
CSMD3-205ENST00000462254 BCL9O00512 1426 aa5.82□□□□□ -1.48
CSMD3-205ENST00000462254 RGS12O14924 1447 aa5.82□□□□□ -1.48
CSMD3-205ENST00000462254 HEG1Q9ULI3 1381 aa5.81□□□□□ -1.48
CSMD3-205ENST00000462254 RNF123Q5XPI4 1314 aa5.81□□□□□ -1.48
CSMD3-205ENST00000462254 BCORQ6W2J9 1755 aa5.81□□□□□ -1.48
CSMD3-205ENST00000462254 BTBD11A6QL63 1104 aa5.81□□□□□ -1.48
CSMD3-205ENST00000462254 DYRK3O43781 588 aa5.81□□□□□ -1.48
CSMD3-205ENST00000462254 PTPN11Q06124 597 aaPredicted RBP5.81□□□□□ -1.48
CSMD3-205ENST00000462254 SLC39A6Q13433 755 aa5.81□□□□□ -1.48
CSMD3-205ENST00000462254 BIRC2Q13490 618 aa5.81□□□□□ -1.48
CSMD3-205ENST00000462254 HSP90AB4PQ58FF6 505 aa5.81□□□□□ -1.48
CSMD3-205ENST00000462254 ZNF772Q68DY9 489 aaPredicted RBP5.81□□□□□ -1.48
CSMD3-205ENST00000462254 TTBK2Q6IQ55 1244 aa5.81□□□□□ -1.48
CSMD3-205ENST00000462254 CDPF1Q6NVV7 123 aa5.81□□□□□ -1.48
CSMD3-205ENST00000462254 PPP1R3FQ6ZSY5 799 aaPredicted RBP5.81□□□□□ -1.48
CSMD3-205ENST00000462254 C8orf58Q8NAV2 365 aa5.81□□□□□ -1.48
CSMD3-205ENST00000462254 GPBAR1Q8TDU6 330 aa5.81□□□□□ -1.48
CSMD3-205ENST00000462254 EMILIN2Q9BXX0 1053 aa5.81□□□□□ -1.48
CSMD3-205ENST00000462254 SEMA6BQ9H3T3 888 aa5.81□□□□□ -1.48
CSMD3-205ENST00000462254 HOMER2Q9NSB8 354 aa5.81□□□□□ -1.48
CSMD3-205ENST00000462254 BABAM1Q9NWV8 329 aa5.81□□□□□ -1.48
CSMD3-205ENST00000462254 RCAN3Q9UKA8 241 aa5.81□□□□□ -1.48
CSMD3-205ENST00000462254 SUPT16HQ9Y5B9 1047 aaKnown RBP5.81□□□□□ -1.48
CSMD3-205ENST00000462254 PCDHGC5Q9Y5F6 944 aa5.81□□□□□ -1.48
CSMD3-205ENST00000462254 ACTL7BQ9Y614 415 aa5.81□□□□□ -1.48
CSMD3-205ENST00000462254 C4AP0C0L4 1744 aa5.81□□□□□ -1.48
CSMD3-205ENST00000462254 C4BP0C0L5 1744 aa5.81□□□□□ -1.48
CSMD3-205ENST00000462254 UBR3Q6ZT12 1888 aa5.81□□□□□ -1.48
CSMD3-205ENST00000462254 EP400Q96L91 3159 aa5.81□□□□□ -1.48
CSMD3-205ENST00000462254 ERVV-2B6SEH9 535 aa5.8□□□□□ -1.48
CSMD3-205ENST00000462254 ELL2O00472 640 aaPredicted RBP5.8□□□□□ -1.48
CSMD3-205ENST00000462254 DHX15O43143 795 aaKnown RBP5.8□□□□□ -1.48
CSMD3-205ENST00000462254 GAS2O43903 313 aaKnown RBP5.8□□□□□ -1.48
CSMD3-205ENST00000462254 VAMP4O75379 141 aa5.8□□□□□ -1.48
CSMD3-205ENST00000462254 CT47B1P0C2W7 299 aaPredicted RBP5.8□□□□□ -1.48
CSMD3-205ENST00000462254 H2AFB1P0C5Y9 115 aa5.8□□□□□ -1.48
CSMD3-205ENST00000462254 H2AFB2P0C5Z0 115 aa5.8□□□□□ -1.48
CSMD3-205ENST00000462254 RARSP54136 660 aaKnown RBP5.8□□□□□ -1.48
CSMD3-205ENST00000462254 EIF4A1P60842 406 aaKnown RBP5.8□□□□□ -1.48
CSMD3-205ENST00000462254 EXOSC10Q01780 885 aaKnown RBP5.8□□□□□ -1.48
CSMD3-205ENST00000462254 IFRD2Q12894 506 aaPredicted RBP5.8□□□□□ -1.48
CSMD3-205ENST00000462254 KIF4BQ2VIQ3 1234 aa5.8□□□□□ -1.48
CSMD3-205ENST00000462254 UVSSAQ2YD98 709 aa5.8□□□□□ -1.48
CSMD3-205ENST00000462254 TWISTNBQ3B726 338 aaPredicted RBP5.8□□□□□ -1.48
CSMD3-205ENST00000462254 TNNI3KQ59H18 835 aa5.8□□□□□ -1.48
CSMD3-205ENST00000462254 HP1BP3Q5SSJ5 553 aaPredicted RBP5.8□□□□□ -1.48
CSMD3-205ENST00000462254 LLGL2Q6P1M3 1020 aa5.8□□□□□ -1.48
CSMD3-205ENST00000462254 TSHZ1Q6ZSZ6 1077 aa5.8□□□□□ -1.48
CSMD3-205ENST00000462254 DYMQ7RTS9 669 aa5.8□□□□□ -1.48
CSMD3-205ENST00000462254 KRT26Q7Z3Y9 468 aa5.8□□□□□ -1.48
CSMD3-205ENST00000462254 FAM20CQ8IXL6 584 aa5.8□□□□□ -1.48
CSMD3-205ENST00000462254 FBLIM1Q8WUP2 373 aa5.8□□□□□ -1.48
CSMD3-205ENST00000462254 ACSBG1Q96GR2 724 aa5.8□□□□□ -1.48
CSMD3-205ENST00000462254 EAF1Q96JC9 268 aaPredicted RBP5.8□□□□□ -1.48
CSMD3-205ENST00000462254 RPS6KC1Q96S38 1066 aa5.8□□□□□ -1.48
CSMD3-205ENST00000462254 DNAJC7Q99615 494 aa5.8□□□□□ -1.48
CSMD3-205ENST00000462254 NT5C1AQ9BXI3 368 aa5.8□□□□□ -1.48
CSMD3-205ENST00000462254 KRT82Q9NSB4 513 aa5.8□□□□□ -1.48
CSMD3-205ENST00000462254 FAM105AQ9NUU6 356 aa5.8□□□□□ -1.48
CSMD3-205ENST00000462254 TCEAL9Q9UHQ7 104 aa5.8□□□□□ -1.48
CSMD3-205ENST00000462254 AP4E1Q9UPM8 1137 aa5.8□□□□□ -1.48
CSMD3-205ENST00000462254 TLR6Q9Y2C9 796 aa5.8□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms