RNA–Protein interactions for RNA: ENST00000462125.5

C9orf3-210, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 961 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-210ENST00000462125 STARD7Q9NQZ5 370 aa15.42■□□□□ 0.06
C9orf3-210ENST00000462125 PRKAG2Q9UGJ0 569 aa15.42■□□□□ 0.06
C9orf3-210ENST00000462125 MAD2L2Q9UI95 211 aa15.42■□□□□ 0.06
C9orf3-210ENST00000462125 COL6A3P12111 3177 aa15.42■□□□□ 0.06
C9orf3-210ENST00000462125 MCM3APO60318 1980 aa15.42■□□□□ 0.06
C9orf3-210ENST00000462125 ABCB11O95342 1321 aa15.42■□□□□ 0.06
C9orf3-210ENST00000462125 ERICH2A1L162 156 aa15.41■□□□□ 0.06
C9orf3-210ENST00000462125 CALML3P27482 149 aa15.41■□□□□ 0.06
C9orf3-210ENST00000462125 MDM2Q00987 491 aaPredicted RBP15.41■□□□□ 0.06
C9orf3-210ENST00000462125 TROAPQ12815 778 aa15.41■□□□□ 0.06
C9orf3-210ENST00000462125 NECTIN1Q15223 517 aa15.41■□□□□ 0.06
C9orf3-210ENST00000462125 QRICH1Q2TAL8 776 aa15.41■□□□□ 0.06
C9orf3-210ENST00000462125 LRIT3Q3SXY7 679 aa15.41■□□□□ 0.06
C9orf3-210ENST00000462125 USH1GQ495M9 461 aa15.41■□□□□ 0.06
C9orf3-210ENST00000462125 EEPD1Q7L9B9 569 aa15.41■□□□□ 0.06
C9orf3-210ENST00000462125 SH3RF1Q7Z6J0 888 aa15.41■□□□□ 0.06
C9orf3-210ENST00000462125 MB21D2Q8IYB1 491 aaPredicted RBP15.41■□□□□ 0.06
C9orf3-210ENST00000462125 TBC1D5Q92609 795 aa15.41■□□□□ 0.06
C9orf3-210ENST00000462125 GLT1D1Q96MS3 346 aa15.41■□□□□ 0.06
C9orf3-210ENST00000462125 LBHD1Q9BQE6 289 aaPredicted RBP15.41■□□□□ 0.06
C9orf3-210ENST00000462125 SENP2Q9HC62 589 aa15.41■□□□□ 0.06
C9orf3-210ENST00000462125 VAT1LQ9HCJ6 419 aa15.41■□□□□ 0.06
C9orf3-210ENST00000462125 PDLIM7Q9NR12 457 aa15.41■□□□□ 0.06
C9orf3-210ENST00000462125 TRIM43BA6NCK2 446 aa15.4■□□□□ 0.06
C9orf3-210ENST00000462125 DYNC1LI2O43237 492 aaPredicted RBP15.4■□□□□ 0.06
C9orf3-210ENST00000462125 ANTXR2P58335 489 aa15.4■□□□□ 0.06
C9orf3-210ENST00000462125 GRM4Q14833 912 aa15.4■□□□□ 0.06
C9orf3-210ENST00000462125 WTAPQ15007 396 aa15.4■□□□□ 0.06
C9orf3-210ENST00000462125 SART3Q15020 963 aaKnown RBP15.4■□□□□ 0.06
C9orf3-210ENST00000462125 DUSP28Q4G0W2 176 aa15.4■□□□□ 0.06
C9orf3-210ENST00000462125 TMEM63BQ5T3F8 832 aa15.4■□□□□ 0.06
C9orf3-210ENST00000462125 CHST3Q7LGC8 479 aa15.4■□□□□ 0.06
C9orf3-210ENST00000462125 SKAP1Q86WV1 359 aa15.4■□□□□ 0.06
C9orf3-210ENST00000462125 FBXO11Q86XK2 927 aa15.4■□□□□ 0.06
C9orf3-210ENST00000462125 MCF2L2Q86YR7 1114 aa15.4■□□□□ 0.06
C9orf3-210ENST00000462125 FBXO16Q8IX29 292 aaPredicted RBP15.4■□□□□ 0.06
C9orf3-210ENST00000462125 TRIM43Q96BQ3 446 aaPredicted RBP15.4■□□□□ 0.06
C9orf3-210ENST00000462125 RIOX1Q9H6W3 641 aa15.4■□□□□ 0.06
C9orf3-210ENST00000462125 MRPL11Q9Y3B7 192 aaKnown RBP15.4■□□□□ 0.06
C9orf3-210ENST00000462125 LAMA3Q16787 3333 aa15.39■□□□□ 0.05
C9orf3-210ENST00000462125 B4DLN1 442 aa15.39■□□□□ 0.05
C9orf3-210ENST00000462125 SOX1O00570 391 aaPredicted RBP15.39■□□□□ 0.05
C9orf3-210ENST00000462125 KIAA0355O15063 1070 aa15.39■□□□□ 0.05
C9orf3-210ENST00000462125 CLTBP09497 229 aa15.39■□□□□ 0.05
C9orf3-210ENST00000462125 MRPL12P52815 198 aaKnown RBP15.39■□□□□ 0.05
C9orf3-210ENST00000462125 GHRHRQ02643 423 aa15.39■□□□□ 0.05
C9orf3-210ENST00000462125 FAAP100Q0VG06 881 aa15.39■□□□□ 0.05
C9orf3-210ENST00000462125 SLC35G1Q2M3R5 365 aa15.39■□□□□ 0.05
C9orf3-210ENST00000462125 NOL8Q76FK4 1167 aaKnown RBP15.39■□□□□ 0.05
C9orf3-210ENST00000462125 TLK2Q86UE8 772 aa15.39■□□□□ 0.05
C9orf3-210ENST00000462125 SYTL5Q8TDW5 730 aaPredicted RBP15.39■□□□□ 0.05
C9orf3-210ENST00000462125 MPHOSPH6Q99547 160 aaKnown RBP15.39■□□□□ 0.05
C9orf3-210ENST00000462125 MAP3K14Q99558 947 aa15.39■□□□□ 0.05
C9orf3-210ENST00000462125 AMNQ9BXJ7 453 aa15.39■□□□□ 0.05
C9orf3-210ENST00000462125 AP5M1Q9H0R1 490 aa15.39■□□□□ 0.05
C9orf3-210ENST00000462125 PPP4R2Q9NY27 417 aa15.39■□□□□ 0.05
C9orf3-210ENST00000462125 ARVCFO00192 962 aa15.38■□□□□ 0.05
C9orf3-210ENST00000462125 SLC27A2O14975 620 aa15.38■□□□□ 0.05
C9orf3-210ENST00000462125 ZBTB5O15062 677 aa15.38■□□□□ 0.05
C9orf3-210ENST00000462125 DHX16O60231 1041 aaKnown RBP15.38■□□□□ 0.05
C9orf3-210ENST00000462125 CABYRO75952 493 aa15.38■□□□□ 0.05
C9orf3-210ENST00000462125 BEX3Q00994 111 aa15.38■□□□□ 0.05
C9orf3-210ENST00000462125 FSCN1Q16658 493 aaKnown RBP15.38■□□□□ 0.05
C9orf3-210ENST00000462125 TMEM67Q5HYA8 995 aa15.38■□□□□ 0.05
C9orf3-210ENST00000462125 GPR153Q6NV75 609 aa15.38■□□□□ 0.05
C9orf3-210ENST00000462125 TMTC2Q8N394 836 aa15.38■□□□□ 0.05
C9orf3-210ENST00000462125 SAMD3Q8N6K7 520 aa15.38■□□□□ 0.05
C9orf3-210ENST00000462125 SLC43A3Q8NBI5 491 aa15.38■□□□□ 0.05
C9orf3-210ENST00000462125 TAAR1Q96RJ0 339 aa15.38■□□□□ 0.05
C9orf3-210ENST00000462125 WDR11Q9BZH6 1224 aa15.38■□□□□ 0.05
C9orf3-210ENST00000462125 MAP3K20Q9NYL2 800 aaKnown RBP15.38■□□□□ 0.05
C9orf3-210ENST00000462125 LCTP09848 1927 aa15.38■□□□□ 0.05
C9orf3-210ENST00000462125 A0A0C4DFX4 3053 aa15.38■□□□□ 0.05
C9orf3-210ENST00000462125 DCDC2CA8MYV0 355 aa15.37■□□□□ 0.05
C9orf3-210ENST00000462125 OPLAHO14841 1288 aa15.37■□□□□ 0.05
C9orf3-210ENST00000462125 CYTH3O43739 400 aa15.37■□□□□ 0.05
C9orf3-210ENST00000462125 ZEB2O60315 1214 aa15.37■□□□□ 0.05
C9orf3-210ENST00000462125 PQBP1O60828 265 aaKnown RBP15.37■□□□□ 0.05
C9orf3-210ENST00000462125 PPP1R11O60927 126 aaPredicted RBP15.37■□□□□ 0.05
C9orf3-210ENST00000462125 PTGS1P23219 599 aa15.37■□□□□ 0.05
C9orf3-210ENST00000462125 ITGB8P26012 769 aa15.37■□□□□ 0.05
C9orf3-210ENST00000462125 MCM5P33992 734 aa15.37■□□□□ 0.05
C9orf3-210ENST00000462125 PDE4DQ08499 809 aa15.37■□□□□ 0.05
C9orf3-210ENST00000462125 TRAF1Q13077 416 aa15.37■□□□□ 0.05
C9orf3-210ENST00000462125 CREB3L3Q68CJ9 461 aa15.37■□□□□ 0.05
C9orf3-210ENST00000462125 CATIPQ7Z7H3 387 aa15.37■□□□□ 0.05
C9orf3-210ENST00000462125 NSUN6Q8TEA1 469 aaKnown RBP15.37■□□□□ 0.05
C9orf3-210ENST00000462125 BADQ92934 168 aa15.37■□□□□ 0.05
C9orf3-210ENST00000462125 IWS1Q96ST2 819 aa15.37■□□□□ 0.05
C9orf3-210ENST00000462125 SEZ6LQ9BYH1 1024 aa15.37■□□□□ 0.05
C9orf3-210ENST00000462125 LY9Q9HBG7 655 aa15.37■□□□□ 0.05
C9orf3-210ENST00000462125 PRDM5Q9NQX1 630 aaPredicted RBP15.37■□□□□ 0.05
C9orf3-210ENST00000462125 COL20A1Q9P218 1284 aa15.37■□□□□ 0.05
C9orf3-210ENST00000462125 MROH7Q68CQ1 1323 aa15.37■□□□□ 0.05
C9orf3-210ENST00000462125 A0A0U1RQG5 324 aaPredicted RBP15.36■□□□□ 0.05
C9orf3-210ENST00000462125 NKRFO15226 690 aaKnown RBP eCLIP15.36■□□□□ 0.059e-10■■■■■ 29
C9orf3-210ENST00000462125 SMARCA1P28370 1054 aa15.36■□□□□ 0.05
C9orf3-210ENST00000462125 HSD17B4P51659 736 aa15.36■□□□□ 0.05
C9orf3-210ENST00000462125 CXCL17Q6UXB2 119 aa15.36■□□□□ 0.05
C9orf3-210ENST00000462125 SCFD2Q8WU76 684 aa15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms