RNA–Protein interactions for RNA: ENST00000461897.5

COL4A6-204, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best)

Gene COL4A6, Length 1,889 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-204ENST00000461897 CDKAL1Q5VV42 579 aa14.03□□□□□ -0.16
COL4A6-204ENST00000461897 SPATA1Q5VX52 437 aa14.03□□□□□ -0.16
COL4A6-204ENST00000461897 PIK3AP1Q6ZUJ8 805 aa14.03□□□□□ -0.16
COL4A6-204ENST00000461897 RSRC2Q7L4I2 434 aaKnown RBP14.03□□□□□ -0.16
COL4A6-204ENST00000461897 DAGLBQ8NCG7 672 aa14.03□□□□□ -0.16
COL4A6-204ENST00000461897 UBXN6Q9BZV1 441 aa14.03□□□□□ -0.16
COL4A6-204ENST00000461897 CSRNP2Q9H175 543 aa14.03□□□□□ -0.16
COL4A6-204ENST00000461897 VAT1LQ9HCJ6 419 aa14.03□□□□□ -0.16
COL4A6-204ENST00000461897 SEC63Q9UGP8 760 aaKnown RBP14.03□□□□□ -0.16
COL4A6-204ENST00000461897 MRFAP1Q9Y605 127 aa14.03□□□□□ -0.16
COL4A6-204ENST00000461897 CDK11BP21127 795 aaKnown RBP14.02□□□□□ -0.16
COL4A6-204ENST00000461897 CASQ1P31415 396 aa14.02□□□□□ -0.16
COL4A6-204ENST00000461897 MMP14P50281 582 aa14.02□□□□□ -0.16
COL4A6-204ENST00000461897 GPATCH4Q5T3I0 446 aaKnown RBP14.02□□□□□ -0.16
COL4A6-204ENST00000461897 RBM26Q5T8P6 1007 aaKnown RBP14.02□□□□□ -0.16
COL4A6-204ENST00000461897 TTBK2Q6IQ55 1244 aa14.02□□□□□ -0.16
COL4A6-204ENST00000461897 KCTD1Q719H9 257 aa14.02□□□□□ -0.16
COL4A6-204ENST00000461897 ZNF771Q7L3S4 317 aaPredicted RBP14.02□□□□□ -0.16
COL4A6-204ENST00000461897 MICALL2Q8IY33 904 aa14.02□□□□□ -0.16
COL4A6-204ENST00000461897 FAM177A1Q8N128 213 aaPredicted RBP14.02□□□□□ -0.16
COL4A6-204ENST00000461897 GPR161Q8N6U8 529 aaKnown RBP14.02□□□□□ -0.16
COL4A6-204ENST00000461897 RASGRP4Q8TDF6 673 aa14.02□□□□□ -0.16
COL4A6-204ENST00000461897 CARD6Q9BX69 1037 aa14.02□□□□□ -0.16
COL4A6-204ENST00000461897 ZMYND12Q9H0C1 365 aa14.02□□□□□ -0.16
COL4A6-204ENST00000461897 SCAF8Q9UPN6 1271 aaKnown RBP14.02□□□□□ -0.16
COL4A6-204ENST00000461897 PLA2G4AP47712 749 aa14.01□□□□□ -0.17
COL4A6-204ENST00000461897 NAPAP54920 295 aa14.01□□□□□ -0.17
COL4A6-204ENST00000461897 CCDC96Q2M329 555 aa14.01□□□□□ -0.17
COL4A6-204ENST00000461897 TMCO3Q6UWJ1 677 aa14.01□□□□□ -0.17
COL4A6-204ENST00000461897 TOGARAM2Q6ZUX3 1019 aa14.01□□□□□ -0.17
COL4A6-204ENST00000461897 GSDMAQ96QA5 445 aa14.01□□□□□ -0.17
COL4A6-204ENST00000461897 WDR24Q96S15 920 aa14.01□□□□□ -0.17
COL4A6-204ENST00000461897 FHDC1Q9C0D6 1143 aaPredicted RBP14.01□□□□□ -0.17
COL4A6-204ENST00000461897 JMJD4Q9H9V9 463 aa14.01□□□□□ -0.17
COL4A6-204ENST00000461897 SAMSN1Q9NSI8 373 aaKnown RBP14.01□□□□□ -0.17
COL4A6-204ENST00000461897 GJA3Q9Y6H8 435 aa14.01□□□□□ -0.17
COL4A6-204ENST00000461897 SBF1O95248 1867 aa14.01□□□□□ -0.17
COL4A6-204ENST00000461897 ITIH6Q6UXX5 1313 aa14.01□□□□□ -0.17
COL4A6-204ENST00000461897 AKR1B15C9JRZ8 316 aaPredicted RBP14.01□□□□□ -0.17
COL4A6-204ENST00000461897 TBC1D12O60347 775 aa14.01□□□□□ -0.17
COL4A6-204ENST00000461897 SLC16A2P36021 539 aa14.01□□□□□ -0.17
COL4A6-204ENST00000461897 TTC38Q5R3I4 469 aa14.01□□□□□ -0.17
COL4A6-204ENST00000461897 GALNT17Q6IS24 598 aa14.01□□□□□ -0.17
COL4A6-204ENST00000461897 USP49Q70CQ1 688 aa14.01□□□□□ -0.17
COL4A6-204ENST00000461897 SAMD7Q7Z3H4 446 aa14.01□□□□□ -0.17
COL4A6-204ENST00000461897 ADGRF4Q8IZF3 695 aa14.01□□□□□ -0.17
COL4A6-204ENST00000461897 DCAF4Q8WV16 495 aa14.01□□□□□ -0.17
COL4A6-204ENST00000461897 CTAGE1Q96RT6 745 aa14.01□□□□□ -0.17
COL4A6-204ENST00000461897 ADD3Q9UEY8 706 aaKnown RBP14.01□□□□□ -0.17
COL4A6-204ENST00000461897 PCDHA6Q9UN73 950 aa14.01□□□□□ -0.17
COL4A6-204ENST00000461897 PCDHA8Q9Y5H6 950 aa14.01□□□□□ -0.17
COL4A6-204ENST00000461897 ASTN2O75129 1339 aaPredicted RBP14□□□□□ -0.17
COL4A6-204ENST00000461897 A0A1W2PRG0 241 aa14□□□□□ -0.17
COL4A6-204ENST00000461897 TRAPPC10P48553 1259 aa14□□□□□ -0.17
COL4A6-204ENST00000461897 ADKP55263 362 aaKnown RBP14□□□□□ -0.17
COL4A6-204ENST00000461897 GNG11P61952 73 aa14□□□□□ -0.17
COL4A6-204ENST00000461897 DPYDQ12882 1025 aa14□□□□□ -0.17
COL4A6-204ENST00000461897 SLFN13Q68D06 897 aa14□□□□□ -0.17
COL4A6-204ENST00000461897 TRMT44Q8IYL2 757 aaKnown RBP14□□□□□ -0.17
COL4A6-204ENST00000461897 GRAMD1CQ8IYS0 662 aa14□□□□□ -0.17
COL4A6-204ENST00000461897 GMCL1P1Q8NEA9 526 aa14□□□□□ -0.17
COL4A6-204ENST00000461897 CCDC12Q8WUD4 166 aaPredicted RBP14□□□□□ -0.17
COL4A6-204ENST00000461897 RABGGTAQ92696 567 aa14□□□□□ -0.17
COL4A6-204ENST00000461897 MTMR8Q96EF0 704 aa14□□□□□ -0.17
COL4A6-204ENST00000461897 CCDC51Q96ER9 411 aa14□□□□□ -0.17
COL4A6-204ENST00000461897 PAGE5Q96GU1 130 aa14□□□□□ -0.17
COL4A6-204ENST00000461897 CNOT7Q9UIV1 285 aaKnown RBP14□□□□□ -0.17
COL4A6-204ENST00000461897 ATAD5Q96QE3 1844 aa14□□□□□ -0.17
COL4A6-204ENST00000461897 A0A087X0B3 334 aa13.99□□□□□ -0.17
COL4A6-204ENST00000461897 F5H6K3 240 aa13.99□□□□□ -0.17
COL4A6-204ENST00000461897 hCG_1984214I3L0E3 225 aa13.99□□□□□ -0.17
COL4A6-204ENST00000461897 PPP1R11O60927 126 aaPredicted RBP13.99□□□□□ -0.17
COL4A6-204ENST00000461897 SLC1A4P43007 532 aa13.99□□□□□ -0.17
COL4A6-204ENST00000461897 MAP3K10Q02779 954 aa13.99□□□□□ -0.17
COL4A6-204ENST00000461897 KLRC3Q07444 240 aa13.99□□□□□ -0.17
COL4A6-204ENST00000461897 TUBB2AQ13885 445 aa13.99□□□□□ -0.17
COL4A6-204ENST00000461897 RASA3Q14644 834 aa13.99□□□□□ -0.17
COL4A6-204ENST00000461897 MIGA2Q7L4E1 593 aa13.99□□□□□ -0.17
COL4A6-204ENST00000461897 PDILTQ8N807 584 aa13.99□□□□□ -0.17
COL4A6-204ENST00000461897 ZNF713Q8N859 430 aaPredicted RBP13.99□□□□□ -0.17
COL4A6-204ENST00000461897 TEPSINQ96N21 525 aa13.99□□□□□ -0.17
COL4A6-204ENST00000461897 TUBB2BQ9BVA1 445 aa13.99□□□□□ -0.17
COL4A6-204ENST00000461897 ZBTB21Q9ULJ3 1066 aa13.99□□□□□ -0.17
COL4A6-204ENST00000461897 ESYT2A0FGR8 921 aa13.99□□□□□ -0.17
COL4A6-204ENST00000461897 SMCO2A6NFE2 343 aa13.99□□□□□ -0.17
COL4A6-204ENST00000461897 PPP1R3GB7ZBB8 358 aa13.99□□□□□ -0.17
COL4A6-204ENST00000461897 USP17L10C9JJH3 530 aa13.99□□□□□ -0.17
COL4A6-204ENST00000461897 RAD21O60216 631 aa13.99□□□□□ -0.17
COL4A6-204ENST00000461897 NDUFB10O96000 172 aa13.99□□□□□ -0.17
COL4A6-204ENST00000461897 CCDC175P0C221 793 aa13.99□□□□□ -0.17
COL4A6-204ENST00000461897 PPP2R3AQ06190 1150 aa13.99□□□□□ -0.17
COL4A6-204ENST00000461897 ZNF174Q15697 407 aa13.99□□□□□ -0.17
COL4A6-204ENST00000461897 PTPN21Q16825 1174 aa13.99□□□□□ -0.17
COL4A6-204ENST00000461897 TBC1D10BQ4KMP7 808 aaPredicted RBP13.99□□□□□ -0.17
COL4A6-204ENST00000461897 JAKMIP3Q5VZ66 844 aa13.99□□□□□ -0.17
COL4A6-204ENST00000461897 COA7Q96BR5 231 aa13.99□□□□□ -0.17
COL4A6-204ENST00000461897 GMCL1Q96IK5 515 aa13.99□□□□□ -0.17
COL4A6-204ENST00000461897 PYM1Q9BRP8 204 aaKnown RBP13.99□□□□□ -0.17
COL4A6-204ENST00000461897 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.99□□□□□ -0.17
COL4A6-204ENST00000461897 ADGRG1Q9Y653 693 aa13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms