RNA–Protein interactions for RNA: ENST00000461873.5

LDB1-203, Transcript of LIM domain binding 1, humanhuman

TSL 2

Gene LDB1, Length 478 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-203ENST00000461873 ARVCFO00192 962 aa10.33□□□□□ -0.76
LDB1-203ENST00000461873 NFIBO00712 420 aa10.33□□□□□ -0.76
LDB1-203ENST00000461873 NKRFO15226 690 aaKnown RBP eCLIP10.33□□□□□ -0.76
LDB1-203ENST00000461873 NEFLP07196 543 aa10.33□□□□□ -0.76
LDB1-203ENST00000461873 WTAPQ15007 396 aa10.33□□□□□ -0.76
LDB1-203ENST00000461873 PPP2R5BQ15173 497 aa10.33□□□□□ -0.76
LDB1-203ENST00000461873 ZNF697Q5TEC3 545 aa10.33□□□□□ -0.76
LDB1-203ENST00000461873 RASGRP2Q7LDG7 609 aa10.33□□□□□ -0.76
LDB1-203ENST00000461873 CATIPQ7Z7H3 387 aa10.33□□□□□ -0.76
LDB1-203ENST00000461873 FBXO11Q86XK2 927 aa10.33□□□□□ -0.76
LDB1-203ENST00000461873 ENAHQ8N8S7 591 aaPredicted RBP10.33□□□□□ -0.76
LDB1-203ENST00000461873 KLHDC9Q8NEP7 349 aa10.33□□□□□ -0.76
LDB1-203ENST00000461873 OR6J1Q8NGC5 347 aa10.33□□□□□ -0.76
LDB1-203ENST00000461873 RNPC3Q96LT9 517 aaKnown RBP10.33□□□□□ -0.76
LDB1-203ENST00000461873 WDR11Q9BZH6 1224 aa10.33□□□□□ -0.76
LDB1-203ENST00000461873 MAF1Q9H063 256 aa10.33□□□□□ -0.76
LDB1-203ENST00000461873 MTIF3Q9H2K0 278 aaKnown RBP10.33□□□□□ -0.76
LDB1-203ENST00000461873 POLR3EQ9NVU0 708 aa10.33□□□□□ -0.76
LDB1-203ENST00000461873 LAMA4Q16363 1823 aa10.33□□□□□ -0.76
LDB1-203ENST00000461873 SNHG28P0DPA3 235 aa10.32□□□□□ -0.76
LDB1-203ENST00000461873 CHMP4BP1P59074 171 aa10.32□□□□□ -0.76
LDB1-203ENST00000461873 RPS6P62753 249 aaKnown RBP10.32□□□□□ -0.76
LDB1-203ENST00000461873 BEX3Q00994 111 aa10.32□□□□□ -0.76
LDB1-203ENST00000461873 PPIGQ13427 754 aaKnown RBP eCLIP10.32□□□□□ -0.763e-10■□□□□ 11.3
LDB1-203ENST00000461873 TTLL4Q14679 1199 aa10.32□□□□□ -0.76
LDB1-203ENST00000461873 ARHGEF16Q5VV41 709 aa10.32□□□□□ -0.76
LDB1-203ENST00000461873 NFXL1Q6ZNB6 911 aa10.32□□□□□ -0.76
LDB1-203ENST00000461873 ANKRD33Q7Z3H0 272 aa10.32□□□□□ -0.76
LDB1-203ENST00000461873 ADGRF4Q8IZF3 695 aa10.32□□□□□ -0.76
LDB1-203ENST00000461873 NSUN6Q8TEA1 469 aaKnown RBP10.32□□□□□ -0.76
LDB1-203ENST00000461873 SCFD2Q8WU76 684 aa10.32□□□□□ -0.76
LDB1-203ENST00000461873 AMNQ9BXJ7 453 aa10.32□□□□□ -0.76
LDB1-203ENST00000461873 UPF3AQ9H1J1 476 aaKnown RBP10.32□□□□□ -0.76
LDB1-203ENST00000461873 NOD1Q9Y239 953 aa10.32□□□□□ -0.76
LDB1-203ENST00000461873 C11orf97A0A1B0GVM6 126 aaPredicted RBP10.31□□□□□ -0.76
LDB1-203ENST00000461873 TRIM43BA6NCK2 446 aa10.31□□□□□ -0.76
LDB1-203ENST00000461873 MYADML2A6NDP7 307 aa10.31□□□□□ -0.76
LDB1-203ENST00000461873 KLRF2D3W0D1 207 aa10.31□□□□□ -0.76
LDB1-203ENST00000461873 SOX1O00570 391 aaPredicted RBP10.31□□□□□ -0.76
LDB1-203ENST00000461873 KIAA0355O15063 1070 aa10.31□□□□□ -0.76
LDB1-203ENST00000461873 KPNA6O60684 536 aa10.31□□□□□ -0.76
LDB1-203ENST00000461873 CFBP00751 764 aa10.31□□□□□ -0.76
LDB1-203ENST00000461873 TIMP1P01033 207 aa10.31□□□□□ -0.76
LDB1-203ENST00000461873 MYL3P08590 195 aa10.31□□□□□ -0.76
LDB1-203ENST00000461873 SUPT20HL2P0C7V6 817 aa10.31□□□□□ -0.76
LDB1-203ENST00000461873 GSPT1P15170 499 aaKnown RBP10.31□□□□□ -0.76
LDB1-203ENST00000461873 SMPD1P17405 629 aa10.31□□□□□ -0.76
LDB1-203ENST00000461873 CHMLP26374 656 aa10.31□□□□□ -0.76
LDB1-203ENST00000461873 ITGA7Q13683 1181 aa10.31□□□□□ -0.76
LDB1-203ENST00000461873 STXBP2Q15833 593 aa10.31□□□□□ -0.76
LDB1-203ENST00000461873 DUSP28Q4G0W2 176 aa10.31□□□□□ -0.76
LDB1-203ENST00000461873 FAM47CQ5HY64 1035 aa10.31□□□□□ -0.76
LDB1-203ENST00000461873 RNF20Q5VTR2 975 aa10.31□□□□□ -0.76
LDB1-203ENST00000461873 CXCL17Q6UXB2 119 aa10.31□□□□□ -0.76
LDB1-203ENST00000461873 SLC30A10Q6XR72 485 aa10.31□□□□□ -0.76
LDB1-203ENST00000461873 SH3RF1Q7Z6J0 888 aa10.31□□□□□ -0.76
LDB1-203ENST00000461873 RGS22Q8NE09 1264 aa10.31□□□□□ -0.76
LDB1-203ENST00000461873 CTCFLQ8NI51 663 aaPredicted RBP10.31□□□□□ -0.76
LDB1-203ENST00000461873 ANKS1AQ92625 1134 aa10.31□□□□□ -0.76
LDB1-203ENST00000461873 TRIM43Q96BQ3 446 aaPredicted RBP10.31□□□□□ -0.76
LDB1-203ENST00000461873 CCDC69A6NI79 296 aa10.3□□□□□ -0.76
LDB1-203ENST00000461873 TXNP10599 105 aaKnown RBP10.3□□□□□ -0.76
LDB1-203ENST00000461873 PDE4AP27815 886 aa10.3□□□□□ -0.76
LDB1-203ENST00000461873 KIF5BP33176 963 aa10.3□□□□□ -0.76
LDB1-203ENST00000461873 FAAP100Q0VG06 881 aa10.3□□□□□ -0.76
LDB1-203ENST00000461873 SHHQ15465 462 aa10.3□□□□□ -0.76
LDB1-203ENST00000461873 QRICH1Q2TAL8 776 aa10.3□□□□□ -0.76
LDB1-203ENST00000461873 TMEM67Q5HYA8 995 aa10.3□□□□□ -0.76
LDB1-203ENST00000461873 SYNE3Q6ZMZ3 975 aa10.3□□□□□ -0.76
LDB1-203ENST00000461873 HOMER1Q86YM7 354 aa10.3□□□□□ -0.76
LDB1-203ENST00000461873 RPUSD2Q8IZ73 545 aaKnown RBP10.3□□□□□ -0.76
LDB1-203ENST00000461873 TMTC2Q8N394 836 aa10.3□□□□□ -0.76
LDB1-203ENST00000461873 SLC17A8Q8NDX2 589 aa10.3□□□□□ -0.76
LDB1-203ENST00000461873 FGD4Q96M96 766 aa10.3□□□□□ -0.76
LDB1-203ENST00000461873 IWS1Q96ST2 819 aa10.3□□□□□ -0.76
LDB1-203ENST00000461873 RMDN3Q96TC7 470 aa10.3□□□□□ -0.76
LDB1-203ENST00000461873 PPP1R12CQ9BZL4 782 aa10.3□□□□□ -0.76
LDB1-203ENST00000461873 PDGFCQ9NRA1 345 aa10.3□□□□□ -0.76
LDB1-203ENST00000461873 SEC63Q9UGP8 760 aaKnown RBP10.3□□□□□ -0.76
LDB1-203ENST00000461873 GNEQ9Y223 722 aaKnown RBP10.3□□□□□ -0.76
LDB1-203ENST00000461873 E7EWF7 191 aa10.29□□□□□ -0.76
LDB1-203ENST00000461873 CCSAPQ6IQ19 270 aaPredicted RBP10.29□□□□□ -0.76
LDB1-203ENST00000461873 MFSD5Q6N075 450 aa10.29□□□□□ -0.76
LDB1-203ENST00000461873 TAPT1Q6NXT6 567 aa10.29□□□□□ -0.76
LDB1-203ENST00000461873 PSRC1Q6PGN9 363 aaPredicted RBP10.29□□□□□ -0.76
LDB1-203ENST00000461873 SEPT14Q6ZU15 432 aa10.29□□□□□ -0.76
LDB1-203ENST00000461873 CENPQQ7L2Z9 268 aaPredicted RBP10.29□□□□□ -0.76
LDB1-203ENST00000461873 RETREG2Q8NC44 543 aa10.29□□□□□ -0.76
LDB1-203ENST00000461873 MORC4Q8TE76 937 aa10.29□□□□□ -0.76
LDB1-203ENST00000461873 CLEC4DQ8WXI8 215 aa10.29□□□□□ -0.76
LDB1-203ENST00000461873 CUL5Q93034 780 aa10.29□□□□□ -0.76
LDB1-203ENST00000461873 FAM161BQ96MY7 647 aa10.29□□□□□ -0.76
LDB1-203ENST00000461873 PURBQ96QR8 312 aaKnown RBP10.29□□□□□ -0.76
LDB1-203ENST00000461873 MTG1Q9BT17 334 aaPredicted RBP10.29□□□□□ -0.76
LDB1-203ENST00000461873 KATNBL1Q9H079 304 aa10.29□□□□□ -0.76
LDB1-203ENST00000461873 CPVLQ9H3G5 476 aa10.29□□□□□ -0.76
LDB1-203ENST00000461873 HIPK3Q9H422 1215 aa10.29□□□□□ -0.76
LDB1-203ENST00000461873 ANO2Q9NQ90 1003 aa10.29□□□□□ -0.76
LDB1-203ENST00000461873 MAP3K20Q9NYL2 800 aaKnown RBP10.29□□□□□ -0.76
LDB1-203ENST00000461873 PCDHA1Q9Y5I3 950 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms