RNA–Protein interactions for RNA: ENST00000461849.1

RBM39-222, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 861 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-222ENST00000461849 SOX1O00570 391 aaPredicted RBP16.09■□□□□ 0.17
RBM39-222ENST00000461849 ADCY6O43306 1168 aa16.09■□□□□ 0.17
RBM39-222ENST00000461849 ZEB2O60315 1214 aa16.09■□□□□ 0.17
RBM39-222ENST00000461849 ALDH5A1P51649 535 aaPredicted RBP16.09■□□□□ 0.17
RBM39-222ENST00000461849 PWP2Q15269 919 aaKnown RBP16.09■□□□□ 0.17
RBM39-222ENST00000461849 IQSEC1Q6DN90 963 aa16.09■□□□□ 0.17
RBM39-222ENST00000461849 STOX1Q6ZVD7 989 aa16.09■□□□□ 0.17
RBM39-222ENST00000461849 FBXO16Q8IX29 292 aaPredicted RBP16.09■□□□□ 0.17
RBM39-222ENST00000461849 PURBQ96QR8 312 aaKnown RBP16.09■□□□□ 0.17
RBM39-222ENST00000461849 C22orf23Q9BZE7 217 aa16.09■□□□□ 0.17
RBM39-222ENST00000461849 AP5M1Q9H0R1 490 aa16.09■□□□□ 0.17
RBM39-222ENST00000461849 UPF3AQ9H1J1 476 aaKnown RBP16.09■□□□□ 0.17
RBM39-222ENST00000461849 VTA1Q9NP79 307 aa16.09■□□□□ 0.17
RBM39-222ENST00000461849 TAF6LQ9Y6J9 622 aa16.09■□□□□ 0.17
RBM39-222ENST00000461849 ELP1O95163 1332 aa16.09■□□□□ 0.17
RBM39-222ENST00000461849 MROH7Q68CQ1 1323 aa16.09■□□□□ 0.17
RBM39-222ENST00000461849 B4DLN1 442 aa16.08■□□□□ 0.16
RBM39-222ENST00000461849 MRPL12P52815 198 aaKnown RBP16.08■□□□□ 0.16
RBM39-222ENST00000461849 CDC37Q16543 378 aaPredicted RBP16.08■□□□□ 0.16
RBM39-222ENST00000461849 CCSAPQ6IQ19 270 aaPredicted RBP16.08■□□□□ 0.16
RBM39-222ENST00000461849 RALYLQ86SE5 291 aaKnown RBP16.08■□□□□ 0.16
RBM39-222ENST00000461849 TLK2Q86UE8 772 aa16.08■□□□□ 0.16
RBM39-222ENST00000461849 NCOA7Q8NI08 942 aa16.08■□□□□ 0.16
RBM39-222ENST00000461849 BADQ92934 168 aa16.08■□□□□ 0.16
RBM39-222ENST00000461849 TOX2Q96NM4 488 aa16.08■□□□□ 0.16
RBM39-222ENST00000461849 TM6SF1Q9BZW5 370 aa16.08■□□□□ 0.16
RBM39-222ENST00000461849 CPVLQ9H3G5 476 aa16.08■□□□□ 0.16
RBM39-222ENST00000461849 TMEM39AQ9NV64 488 aa16.08■□□□□ 0.16
RBM39-222ENST00000461849 A0A0U1RQG5 324 aaPredicted RBP16.07■□□□□ 0.16
RBM39-222ENST00000461849 TRIM43BA6NCK2 446 aa16.07■□□□□ 0.16
RBM39-222ENST00000461849 DYNC1LI2O43237 492 aaPredicted RBP16.07■□□□□ 0.16
RBM39-222ENST00000461849 HMGB1P09429 215 aaKnown RBP16.07■□□□□ 0.16
RBM39-222ENST00000461849 RAG1P15918 1043 aa16.07■□□□□ 0.16
RBM39-222ENST00000461849 SMPD1P17405 629 aa16.07■□□□□ 0.16
RBM39-222ENST00000461849 RPS6P62753 249 aaKnown RBP16.07■□□□□ 0.16
RBM39-222ENST00000461849 SART3Q15020 963 aaKnown RBP16.07■□□□□ 0.16
RBM39-222ENST00000461849 GPR153Q6NV75 609 aa16.07■□□□□ 0.16
RBM39-222ENST00000461849 SLC30A10Q6XR72 485 aa16.07■□□□□ 0.16
RBM39-222ENST00000461849 ANKRD33Q7Z3H0 272 aa16.07■□□□□ 0.16
RBM39-222ENST00000461849 SH3RF1Q7Z6J0 888 aa16.07■□□□□ 0.16
RBM39-222ENST00000461849 ADGRF4Q8IZF3 695 aa16.07■□□□□ 0.16
RBM39-222ENST00000461849 CLEC4DQ8WXI8 215 aa16.07■□□□□ 0.16
RBM39-222ENST00000461849 TRIM43Q96BQ3 446 aaPredicted RBP16.07■□□□□ 0.16
RBM39-222ENST00000461849 TBC1D32Q96NH3 1257 aa16.07■□□□□ 0.16
RBM39-222ENST00000461849 MTA3Q9BTC8 594 aa16.07■□□□□ 0.16
RBM39-222ENST00000461849 VAT1LQ9HCJ6 419 aa16.07■□□□□ 0.16
RBM39-222ENST00000461849 PDGFCQ9NRA1 345 aa16.07■□□□□ 0.16
RBM39-222ENST00000461849 GNEQ9Y223 722 aaKnown RBP16.07■□□□□ 0.16
RBM39-222ENST00000461849 DDX49Q9Y6V7 483 aaKnown RBP16.07■□□□□ 0.16
RBM39-222ENST00000461849 ASTN1O14525 1302 aa16.07■□□□□ 0.16
RBM39-222ENST00000461849 ABCB11O95342 1321 aa16.07■□□□□ 0.16
RBM39-222ENST00000461849 PSMA5P28066 241 aa16.06■□□□□ 0.16
RBM39-222ENST00000461849 IRX5P78411 483 aaPredicted RBP16.06■□□□□ 0.16
RBM39-222ENST00000461849 BEX3Q00994 111 aa16.06■□□□□ 0.16
RBM39-222ENST00000461849 PDE4DQ08499 809 aa16.06■□□□□ 0.16
RBM39-222ENST00000461849 FSCN1Q16658 493 aaKnown RBP16.06■□□□□ 0.16
RBM39-222ENST00000461849 TAPT1Q6NXT6 567 aa16.06■□□□□ 0.16
RBM39-222ENST00000461849 MCF2L2Q86YR7 1114 aa16.06■□□□□ 0.16
RBM39-222ENST00000461849 MB21D2Q8IYB1 491 aaPredicted RBP16.06■□□□□ 0.16
RBM39-222ENST00000461849 DNERQ8NFT8 737 aa16.06■□□□□ 0.16
RBM39-222ENST00000461849 MORC4Q8TE76 937 aa16.06■□□□□ 0.16
RBM39-222ENST00000461849 NEK1Q96PY6 1258 aa16.06■□□□□ 0.16
RBM39-222ENST00000461849 Q9Y3F1 56 aa16.06■□□□□ 0.16
RBM39-222ENST00000461849 ARVCFO00192 962 aa16.05■□□□□ 0.16
RBM39-222ENST00000461849 IFIT3O14879 490 aaKnown RBP16.05■□□□□ 0.16
RBM39-222ENST00000461849 TLR3O15455 904 aaKnown RBP16.05■□□□□ 0.16
RBM39-222ENST00000461849 CABYRO75952 493 aa16.05■□□□□ 0.16
RBM39-222ENST00000461849 ADCK5Q3MIX3 580 aa16.05■□□□□ 0.16
RBM39-222ENST00000461849 CYB5R4Q7L1T6 521 aa16.05■□□□□ 0.16
RBM39-222ENST00000461849 FBXO11Q86XK2 927 aa16.05■□□□□ 0.16
RBM39-222ENST00000461849 RGS22Q8NE09 1264 aa16.05■□□□□ 0.16
RBM39-222ENST00000461849 IL27Q8NEV9 243 aa16.05■□□□□ 0.16
RBM39-222ENST00000461849 WDR11Q9BZH6 1224 aa16.05■□□□□ 0.16
RBM39-222ENST00000461849 MRPL11Q9Y3B7 192 aaKnown RBP16.05■□□□□ 0.16
RBM39-222ENST00000461849 LTBP2Q14767 1821 aa16.05■□□□□ 0.16
RBM39-222ENST00000461849 KIAA0355O15063 1070 aa16.04■□□□□ 0.16
RBM39-222ENST00000461849 MCM5P33992 734 aa16.04■□□□□ 0.16
RBM39-222ENST00000461849 NKX3-2P78367 333 aa16.04■□□□□ 0.16
RBM39-222ENST00000461849 FAAP100Q0VG06 881 aa16.04■□□□□ 0.16
RBM39-222ENST00000461849 WTAPQ15007 396 aa16.04■□□□□ 0.16
RBM39-222ENST00000461849 SEC23AQ15436 765 aa16.04■□□□□ 0.16
RBM39-222ENST00000461849 QRICH1Q2TAL8 776 aa16.04■□□□□ 0.16
RBM39-222ENST00000461849 DUSP28Q4G0W2 176 aa16.04■□□□□ 0.16
RBM39-222ENST00000461849 BRDTQ58F21 947 aaPredicted RBP16.04■□□□□ 0.16
RBM39-222ENST00000461849 JAKMIP1Q96N16 626 aaKnown RBP16.04■□□□□ 0.16
RBM39-222ENST00000461849 MAF1Q9H063 256 aa16.04■□□□□ 0.16
RBM39-222ENST00000461849 JMJD4Q9H9V9 463 aa16.04■□□□□ 0.16
RBM39-222ENST00000461849 LAMA2P24043 3122 aaKnown RBP16.03■□□□□ 0.16
RBM39-222ENST00000461849 KLRF2D3W0D1 207 aa16.03■□□□□ 0.16
RBM39-222ENST00000461849 CTAGE5O15320 804 aa16.03■□□□□ 0.16
RBM39-222ENST00000461849 PPP2R5BQ15173 497 aa16.03■□□□□ 0.16
RBM39-222ENST00000461849 BLOC1S2Q6QNY1 142 aa16.03■□□□□ 0.16
RBM39-222ENST00000461849 CXCL17Q6UXB2 119 aa16.03■□□□□ 0.16
RBM39-222ENST00000461849 DHX32Q7L7V1 743 aaKnown RBP16.03■□□□□ 0.16
RBM39-222ENST00000461849 DEFB123Q8N688 67 aa16.03■□□□□ 0.16
RBM39-222ENST00000461849 AMNQ9BXJ7 453 aa16.03■□□□□ 0.16
RBM39-222ENST00000461849 ZSWIM6Q9HCJ5 1215 aa16.03■□□□□ 0.16
RBM39-222ENST00000461849 LCTP09848 1927 aa16.03■□□□□ 0.16
RBM39-222ENST00000461849 LRRC37A2A6NM11 1700 aa16.02■□□□□ 0.16
RBM39-222ENST00000461849 NKRFO15226 690 aaKnown RBP eCLIP16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms