RNA–Protein interactions for RNA: ENST00000461522.1

UBA3-204, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

TSL 2

Gene UBA3, Length 693 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-204ENST00000461522 CNKSR3Q6P9H4 555 aa7□□□□□ -1.29
UBA3-204ENST00000461522 KCNC2Q96PR1 638 aa7□□□□□ -1.29
UBA3-204ENST00000461522 APBA2Q99767 749 aa7□□□□□ -1.29
UBA3-204ENST00000461522 FBLN5Q9UBX5 448 aa7□□□□□ -1.29
UBA3-204ENST00000461522 TRBV23OR9-2A0A075B6M9 112 aa6.99□□□□□ -1.29
UBA3-204ENST00000461522 SMAD7O15105 426 aaKnown RBP6.99□□□□□ -1.29
UBA3-204ENST00000461522 BUB1BO60566 1050 aaPredicted RBP6.99□□□□□ -1.29
UBA3-204ENST00000461522 TRIM13O60858 407 aa6.99□□□□□ -1.29
UBA3-204ENST00000461522 PPP1R11O60927 126 aaPredicted RBP6.99□□□□□ -1.29
UBA3-204ENST00000461522 NAT2P11245 290 aa6.99□□□□□ -1.29
UBA3-204ENST00000461522 PAMP19021 973 aa6.99□□□□□ -1.29
UBA3-204ENST00000461522 LILRA6Q6PI73 481 aa6.99□□□□□ -1.29
UBA3-204ENST00000461522 POMZP3Q6PJE2 187 aa6.99□□□□□ -1.29
UBA3-204ENST00000461522 VPS37DQ86XT2 251 aa6.99□□□□□ -1.29
UBA3-204ENST00000461522 CRACR2BQ8N4Y2 399 aaPredicted RBP6.99□□□□□ -1.29
UBA3-204ENST00000461522 MARCH10Q8NA82 808 aaPredicted RBP6.99□□□□□ -1.29
UBA3-204ENST00000461522 BVESQ8NE79 360 aa6.99□□□□□ -1.29
UBA3-204ENST00000461522 COPS5Q92905 334 aa6.99□□□□□ -1.29
UBA3-204ENST00000461522 PARD6AQ9NPB6 346 aa6.99□□□□□ -1.29
UBA3-204ENST00000461522 PLA2G2DQ9UNK4 145 aa6.99□□□□□ -1.29
UBA3-204ENST00000461522 NPHP3-ACAD11A0A0J9YXS1 232 aa6.98□□□□□ -1.29
UBA3-204ENST00000461522 ZC3H12DA2A288 527 aaKnown RBP6.98□□□□□ -1.29
UBA3-204ENST00000461522 F8W031 263 aaPredicted RBP6.98□□□□□ -1.29
UBA3-204ENST00000461522 KCNH1O95259 989 aa6.98□□□□□ -1.29
UBA3-204ENST00000461522 BMP7P18075 431 aa6.98□□□□□ -1.29
UBA3-204ENST00000461522 PRR5P85299 388 aa6.98□□□□□ -1.29
UBA3-204ENST00000461522 TNNI3KQ59H18 835 aa6.98□□□□□ -1.29
UBA3-204ENST00000461522 CPNE8Q86YQ8 564 aa6.98□□□□□ -1.29
UBA3-204ENST00000461522 TRIM59Q8IWR1 403 aa6.98□□□□□ -1.29
UBA3-204ENST00000461522 LZTR1Q8N653 840 aa6.98□□□□□ -1.29
UBA3-204ENST00000461522 MRGPRX3Q96LB0 322 aa6.98□□□□□ -1.29
UBA3-204ENST00000461522 MTA3Q9BTC8 594 aa6.98□□□□□ -1.29
UBA3-204ENST00000461522 ACTR10Q9NZ32 417 aa6.98□□□□□ -1.29
UBA3-204ENST00000461522 RWDD3Q9Y3V2 267 aa6.98□□□□□ -1.29
UBA3-204ENST00000461522 MRVI1Q9Y6F6 885 aa6.98□□□□□ -1.29
UBA3-204ENST00000461522 SSBP05455 408 aaKnown RBP eCLIP6.97□□□□□ -1.29
UBA3-204ENST00000461522 PFKLP17858 780 aa6.97□□□□□ -1.29
UBA3-204ENST00000461522 HOXA5P20719 270 aa6.97□□□□□ -1.29
UBA3-204ENST00000461522 SCRN1Q12765 414 aa6.97□□□□□ -1.29
UBA3-204ENST00000461522 TARBP2Q15633 366 aaKnown RBP6.97□□□□□ -1.29
UBA3-204ENST00000461522 ZCCHC4Q9H5U6 513 aa6.97□□□□□ -1.29
UBA3-204ENST00000461522 C7orf72A4D263 438 aa6.96□□□□□ -1.3
UBA3-204ENST00000461522 NOP56O00567 594 aaKnown RBP6.96□□□□□ -1.3
UBA3-204ENST00000461522 CAP1Q01518 475 aa6.96□□□□□ -1.3
UBA3-204ENST00000461522 GTF2IRD2BQ6EKJ0 949 aa6.96□□□□□ -1.3
UBA3-204ENST00000461522 C6orf15Q6UXA7 325 aaPredicted RBP6.96□□□□□ -1.3
UBA3-204ENST00000461522 GTF2IRD2Q86UP8 949 aa6.96□□□□□ -1.3
UBA3-204ENST00000461522 CABP7Q86V35 215 aa6.96□□□□□ -1.3
UBA3-204ENST00000461522 NETO2Q8NC67 525 aa6.96□□□□□ -1.3
UBA3-204ENST00000461522 TSPAN17Q96FV3 270 aa6.96□□□□□ -1.3
UBA3-204ENST00000461522 C20orf173Q96LM9 149 aa6.96□□□□□ -1.3
UBA3-204ENST00000461522 PWWP2AQ96N64 755 aa6.96□□□□□ -1.3
UBA3-204ENST00000461522 MMP19Q99542 508 aa6.96□□□□□ -1.3
UBA3-204ENST00000461522 TINF2Q9BSI4 451 aa6.96□□□□□ -1.3
UBA3-204ENST00000461522 RNF38Q9H0F5 515 aa6.96□□□□□ -1.3
UBA3-204ENST00000461522 CLEC1BQ9P126 229 aa6.96□□□□□ -1.3
UBA3-204ENST00000461522 GULP1Q9UBP9 304 aa6.96□□□□□ -1.3
UBA3-204ENST00000461522 PRKAG3Q9UGI9 489 aa6.96□□□□□ -1.3
UBA3-204ENST00000461522 DBR1Q9UK59 544 aaKnown RBP6.96□□□□□ -1.3
UBA3-204ENST00000461522 FGRP09769 529 aa6.95□□□□□ -1.3
UBA3-204ENST00000461522 PLS3P13797 630 aa6.95□□□□□ -1.3
UBA3-204ENST00000461522 ATF2P15336 505 aa6.95□□□□□ -1.3
UBA3-204ENST00000461522 ETFBP38117 255 aa6.95□□□□□ -1.3
UBA3-204ENST00000461522 LIMS1P48059 325 aa6.95□□□□□ -1.3
UBA3-204ENST00000461522 RBM10P98175 930 aaKnown RBP6.95□□□□□ -1.3
UBA3-204ENST00000461522 CYP4F3Q08477 520 aa6.95□□□□□ -1.3
UBA3-204ENST00000461522 GNL2Q13823 731 aaKnown RBP6.95□□□□□ -1.3
UBA3-204ENST00000461522 MBLAC2Q68D91 279 aa6.95□□□□□ -1.3
UBA3-204ENST00000461522 FAM178BQ8IXR5 827 aa6.95□□□□□ -1.3
UBA3-204ENST00000461522 ZNF428Q96B54 188 aa6.95□□□□□ -1.3
UBA3-204ENST00000461522 LGR4Q9BXB1 951 aa6.95□□□□□ -1.3
UBA3-204ENST00000461522 NKX2-4Q9H2Z4 354 aa6.95□□□□□ -1.3
UBA3-204ENST00000461522 GPRC5CQ9NQ84 441 aa6.95□□□□□ -1.3
UBA3-204ENST00000461522 CYP26B1Q9NR63 512 aa6.95□□□□□ -1.3
UBA3-204ENST00000461522 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP6.95□□□□□ -1.3
UBA3-204ENST00000461522 B2RBV5 119 aa6.94□□□□□ -1.3
UBA3-204ENST00000461522 NPHS1O60500 1241 aa6.94□□□□□ -1.3
UBA3-204ENST00000461522 THBDP07204 575 aa6.94□□□□□ -1.3
UBA3-204ENST00000461522 LARP1BQ659C4 914 aaKnown RBP6.94□□□□□ -1.3
UBA3-204ENST00000461522 LINC01356Q8N9X3 169 aa6.94□□□□□ -1.3
UBA3-204ENST00000461522 BUD13Q9BRD0 619 aaKnown RBP eCLIP6.94□□□□□ -1.3
UBA3-204ENST00000461522 RXFP1Q9HBX9 757 aa6.94□□□□□ -1.3
UBA3-204ENST00000461522 ASGR2P07307 311 aa6.93□□□□□ -1.3
UBA3-204ENST00000461522 NCAM1P13591 858 aa6.93□□□□□ -1.3
UBA3-204ENST00000461522 CTSWP56202 376 aa6.93□□□□□ -1.3
UBA3-204ENST00000461522 FOXO4P98177 505 aa6.93□□□□□ -1.3
UBA3-204ENST00000461522 VMACQ2NL98 169 aa6.93□□□□□ -1.3
UBA3-204ENST00000461522 WWC2Q6AWC2 1192 aa6.93□□□□□ -1.3
UBA3-204ENST00000461522 NLGN1Q8N2Q7 840 aa6.93□□□□□ -1.3
UBA3-204ENST00000461522 TP53I13Q8NBR0 393 aaPredicted RBP6.93□□□□□ -1.3
UBA3-204ENST00000461522 NPLOC4Q8TAT6 608 aa6.93□□□□□ -1.3
UBA3-204ENST00000461522 PLEKHO2Q8TD55 490 aa6.93□□□□□ -1.3
UBA3-204ENST00000461522 FRS2Q8WU20 508 aa6.93□□□□□ -1.3
UBA3-204ENST00000461522 ALG3Q92685 438 aa6.93□□□□□ -1.3
UBA3-204ENST00000461522 DPF3Q92784 378 aa6.93□□□□□ -1.3
UBA3-204ENST00000461522 PPP1R14AQ96A00 147 aa6.93□□□□□ -1.3
UBA3-204ENST00000461522 PEX11GQ96HA9 241 aa6.93□□□□□ -1.3
UBA3-204ENST00000461522 KRTAP4-9Q9BYQ8 210 aa6.93□□□□□ -1.3
UBA3-204ENST00000461522 XYLT2Q9H1B5 865 aa6.93□□□□□ -1.3
UBA3-204ENST00000461522 NUDT5Q9UKK9 219 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms