RNA–Protein interactions for RNA: ENST00000461383.1

VCL-203, Transcript of vinculin, humanhuman

TSL 2

Gene VCL, Length 268 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-203ENST00000461383 SHISA5Q8N114 240 aa4.36□□□□□ -1.71
VCL-203ENST00000461383 UBE2FQ969M7 185 aa4.36□□□□□ -1.71
VCL-203ENST00000461383 HSPA12BQ96MM6 686 aa4.36□□□□□ -1.71
VCL-203ENST00000461383 FCRL3Q96P31 734 aaPredicted RBP4.36□□□□□ -1.71
VCL-203ENST00000461383 PHF20Q9BVI0 1012 aa4.36□□□□□ -1.71
VCL-203ENST00000461383 FOXP3Q9BZS1 431 aa4.36□□□□□ -1.71
VCL-203ENST00000461383 DUSP15Q9H1R2 295 aaPredicted RBP4.36□□□□□ -1.71
VCL-203ENST00000461383 MKNK2Q9HBH9 465 aa4.36□□□□□ -1.71
VCL-203ENST00000461383 TRIM39Q9HCM9 518 aa4.36□□□□□ -1.71
VCL-203ENST00000461383 DDX56Q9NY93 547 aaKnown RBP4.36□□□□□ -1.71
VCL-203ENST00000461383 CLEC1BQ9P126 229 aa4.36□□□□□ -1.71
VCL-203ENST00000461383 CCDC39Q9UFE4 941 aa4.36□□□□□ -1.71
VCL-203ENST00000461383 DUSP13Q9UII6 198 aa4.36□□□□□ -1.71
VCL-203ENST00000461383 TCFL5Q9UL49 500 aa4.36□□□□□ -1.71
VCL-203ENST00000461383 ST14Q9Y5Y6 855 aa4.36□□□□□ -1.71
VCL-203ENST00000461383 TRBV23OR9-2A0A075B6M9 112 aa4.35□□□□□ -1.71
VCL-203ENST00000461383 NPHP3-ACAD11A0A0J9YXS1 232 aa4.35□□□□□ -1.71
VCL-203ENST00000461383 LOC101059915A0A1B0GWI6 518 aaPredicted RBP4.35□□□□□ -1.71
VCL-203ENST00000461383 GSG1L2A8MUP6 293 aa4.35□□□□□ -1.71
VCL-203ENST00000461383 CYP26A1O43174 497 aa4.35□□□□□ -1.71
VCL-203ENST00000461383 KCNQ2O43526 872 aa4.35□□□□□ -1.71
VCL-203ENST00000461383 MYO1BO43795 1136 aa4.35□□□□□ -1.71
VCL-203ENST00000461383 RASGRP1O95267 797 aa4.35□□□□□ -1.71
VCL-203ENST00000461383 CRTAMO95727 393 aa4.35□□□□□ -1.71
VCL-203ENST00000461383 S100BP04271 92 aaPredicted RBP4.35□□□□□ -1.71
VCL-203ENST00000461383 JMJD7P0C870 316 aa4.35□□□□□ -1.71
VCL-203ENST00000461383 PLS3P13797 630 aa4.35□□□□□ -1.71
VCL-203ENST00000461383 ITGB5P18084 799 aa4.35□□□□□ -1.71
VCL-203ENST00000461383 PAMP19021 973 aa4.35□□□□□ -1.71
VCL-203ENST00000461383 ENDOUP21128 410 aaKnown RBP4.35□□□□□ -1.71
VCL-203ENST00000461383 CLCN7P51798 805 aa4.35□□□□□ -1.71
VCL-203ENST00000461383 OXCT1P55809 520 aa4.35□□□□□ -1.71
VCL-203ENST00000461383 EVA1CP58658 441 aa4.35□□□□□ -1.71
VCL-203ENST00000461383 STRN3Q13033 797 aa4.35□□□□□ -1.71
VCL-203ENST00000461383 KCNAB2Q13303 367 aa4.35□□□□□ -1.71
VCL-203ENST00000461383 ZNF460Q14592 562 aa4.35□□□□□ -1.71
VCL-203ENST00000461383 SART3Q15020 963 aaKnown RBP4.35□□□□□ -1.71
VCL-203ENST00000461383 E4F1Q66K89 784 aaPredicted RBP4.35□□□□□ -1.71
VCL-203ENST00000461383 STYK1Q6J9G0 422 aa4.35□□□□□ -1.71
VCL-203ENST00000461383 KCNT2Q6UVM3 1135 aa4.35□□□□□ -1.71
VCL-203ENST00000461383 RNF180Q86T96 592 aa4.35□□□□□ -1.71
VCL-203ENST00000461383 DDX53Q86TM3 631 aaKnown RBP4.35□□□□□ -1.71
VCL-203ENST00000461383 JAMLQ86YT9 394 aa4.35□□□□□ -1.71
VCL-203ENST00000461383 ZC3H7AQ8IWR0 971 aaKnown RBP4.35□□□□□ -1.71
VCL-203ENST00000461383 IFNL3Q8IZI9 196 aa4.35□□□□□ -1.71
VCL-203ENST00000461383 ABI1Q8IZP0 508 aa4.35□□□□□ -1.71
VCL-203ENST00000461383 GSTCDQ8NEC7 633 aa4.35□□□□□ -1.71
VCL-203ENST00000461383 DDX1Q92499 740 aaKnown RBP4.35□□□□□ -1.71
VCL-203ENST00000461383 DIO2Q92813 273 aa4.35□□□□□ -1.71
VCL-203ENST00000461383 COPS5Q92905 334 aa4.35□□□□□ -1.71
VCL-203ENST00000461383 CHAMP1Q96JM3 812 aa4.35□□□□□ -1.71
VCL-203ENST00000461383 ZFYVE21Q9BQ24 234 aa4.35□□□□□ -1.71
VCL-203ENST00000461383 ALG1Q9BT22 464 aa4.35□□□□□ -1.71
VCL-203ENST00000461383 MCMBPQ9BTE3 642 aa4.35□□□□□ -1.71
VCL-203ENST00000461383 SLC12A9Q9BXP2 914 aa4.35□□□□□ -1.71
VCL-203ENST00000461383 PCDHA9Q9Y5H5 950 aa4.35□□□□□ -1.71
VCL-203ENST00000461383 TMEM265A0A087WTH1 108 aa4.34□□□□□ -1.71
VCL-203ENST00000461383 MARCH6O60337 910 aa4.34□□□□□ -1.71
VCL-203ENST00000461383 ZNF205O95201 554 aa4.34□□□□□ -1.71
VCL-203ENST00000461383 TBC1D8O95759 1140 aa4.34□□□□□ -1.71
VCL-203ENST00000461383 PDGFRBP09619 1106 aa4.34□□□□□ -1.71
VCL-203ENST00000461383 SRFP11831 508 aa4.34□□□□□ -1.71
VCL-203ENST00000461383 LTBRP36941 435 aa4.34□□□□□ -1.71
VCL-203ENST00000461383 LAPTM5Q13571 262 aa4.34□□□□□ -1.71
VCL-203ENST00000461383 FAM50AQ14320 339 aaKnown RBP4.34□□□□□ -1.71
VCL-203ENST00000461383 IFI16Q16666 785 aaKnown RBP4.34□□□□□ -1.71
VCL-203ENST00000461383 NKPD1Q17RQ9 610 aa4.34□□□□□ -1.71
VCL-203ENST00000461383 ACBD5Q5T8D3 534 aaPredicted RBP4.34□□□□□ -1.71
VCL-203ENST00000461383 PIK3R6Q5UE93 754 aa4.34□□□□□ -1.71
VCL-203ENST00000461383 IQCEQ6IPM2 695 aa4.34□□□□□ -1.71
VCL-203ENST00000461383 RCSD1Q6JBY9 416 aa4.34□□□□□ -1.71
VCL-203ENST00000461383 RNF111Q6ZNA4 994 aa4.34□□□□□ -1.71
VCL-203ENST00000461383 THAP5Q7Z6K1 395 aa4.34□□□□□ -1.71
VCL-203ENST00000461383 DDX42Q86XP3 938 aaKnown RBP eCLIP4.34□□□□□ -1.71
VCL-203ENST00000461383 CREG2Q8IUH2 290 aa4.34□□□□□ -1.71
VCL-203ENST00000461383 SPACA3Q8IXA5 215 aa4.34□□□□□ -1.71
VCL-203ENST00000461383 RPUSD2Q8IZ73 545 aaKnown RBP4.34□□□□□ -1.71
VCL-203ENST00000461383 LINC00116Q8NCU8 138 aa4.34□□□□□ -1.71
VCL-203ENST00000461383 NPLOC4Q8TAT6 608 aa4.34□□□□□ -1.71
VCL-203ENST00000461383 PUM2Q8TB72 1066 aaKnown RBP eCLIP4.34□□□□□ -1.71
VCL-203ENST00000461383 NETO1Q8TDF5 533 aa4.34□□□□□ -1.71
VCL-203ENST00000461383 FRS2Q8WU20 508 aa4.34□□□□□ -1.71
VCL-203ENST00000461383 USP7Q93009 1102 aa4.34□□□□□ -1.71
VCL-203ENST00000461383 C1orf159Q96HA4 380 aa4.34□□□□□ -1.71
VCL-203ENST00000461383 SCLYQ96I15 445 aa4.34□□□□□ -1.71
VCL-203ENST00000461383 WNK4Q96J92 1243 aa4.34□□□□□ -1.71
VCL-203ENST00000461383 XPO5Q9HAV4 1204 aaKnown RBP eCLIP4.34□□□□□ -1.71
VCL-203ENST00000461383 GPR27Q9NS67 375 aa4.34□□□□□ -1.71
VCL-203ENST00000461383 AP5S1Q9NUS5 200 aa4.34□□□□□ -1.71
VCL-203ENST00000461383 KLHL42Q9P2K6 505 aa4.34□□□□□ -1.71
VCL-203ENST00000461383 ANGEL1Q9UNK9 670 aaKnown RBP4.34□□□□□ -1.71
VCL-203ENST00000461383 PCDHA8Q9Y5H6 950 aa4.34□□□□□ -1.71
VCL-203ENST00000461383 ASXL2Q76L83 1435 aa4.33□□□□□ -1.72
VCL-203ENST00000461383 TCRBV16S1A1N1A0A5B0 115 aa4.33□□□□□ -1.72
VCL-203ENST00000461383 WASH4PA8MWX3 477 aa4.33□□□□□ -1.72
VCL-203ENST00000461383 ALG1L2C9J202 215 aa4.33□□□□□ -1.72
VCL-203ENST00000461383 SRGAP2CP0DJJ0 459 aa4.33□□□□□ -1.72
VCL-203ENST00000461383 RPL10P27635 214 aaKnown RBP4.33□□□□□ -1.72
VCL-203ENST00000461383 CDKN1CP49918 316 aaPredicted RBP4.33□□□□□ -1.72
VCL-203ENST00000461383 SCNN1BP51168 640 aa4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms