RNA–Protein interactions for RNA: ENST00000461195.5

TRAF4-207, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 787 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-207ENST00000461195 DNERQ8NFT8 737 aa26.13■■□□□ 1.77
TRAF4-207ENST00000461195 MYL10Q9BUA6 226 aa26.13■■□□□ 1.77
TRAF4-207ENST00000461195 LRRC2Q9BYS8 371 aa26.13■■□□□ 1.77
TRAF4-207ENST00000461195 BAZ2BQ9UIF8 2168 aaKnown RBP26.12■■□□□ 1.77
TRAF4-207ENST00000461195 ADCYAP1R1P41586 468 aa26.12■■□□□ 1.77
TRAF4-207ENST00000461195 TRAF1Q13077 416 aa26.12■■□□□ 1.77
TRAF4-207ENST00000461195 HOMER1Q86YM7 354 aa26.12■■□□□ 1.77
TRAF4-207ENST00000461195 MPHOSPH6Q99547 160 aaKnown RBP26.12■■□□□ 1.77
TRAF4-207ENST00000461195 VTA1Q9NP79 307 aa26.12■■□□□ 1.77
TRAF4-207ENST00000461195 PHF24Q9UPV7 400 aa26.12■■□□□ 1.77
TRAF4-207ENST00000461195 ADCY6O43306 1168 aa26.11■■□□□ 1.77
TRAF4-207ENST00000461195 CYTH3O43739 400 aa26.11■■□□□ 1.77
TRAF4-207ENST00000461195 PPP1R11O60927 126 aaPredicted RBP26.11■■□□□ 1.77
TRAF4-207ENST00000461195 CALM1P0DP23 149 aa26.11■■□□□ 1.77
TRAF4-207ENST00000461195 CALM2P0DP24 149 aa26.11■■□□□ 1.77
TRAF4-207ENST00000461195 CALM3P0DP25 149 aa26.11■■□□□ 1.77
TRAF4-207ENST00000461195 ATN1P54259 1190 aaPredicted RBP26.11■■□□□ 1.77
TRAF4-207ENST00000461195 TNFAIP2Q03169 654 aa26.11■■□□□ 1.77
TRAF4-207ENST00000461195 ADCK5Q3MIX3 580 aa26.11■■□□□ 1.77
TRAF4-207ENST00000461195 DHX32Q7L7V1 743 aaKnown RBP26.11■■□□□ 1.77
TRAF4-207ENST00000461195 EEPD1Q7L9B9 569 aa26.11■■□□□ 1.77
TRAF4-207ENST00000461195 FBXO16Q8IX29 292 aaPredicted RBP26.11■■□□□ 1.77
TRAF4-207ENST00000461195 TBC1D5Q92609 795 aa26.11■■□□□ 1.77
TRAF4-207ENST00000461195 PIGSQ96S52 555 aa26.11■■□□□ 1.77
TRAF4-207ENST00000461195 TSEN34Q9BSV6 310 aaKnown RBP26.11■■□□□ 1.77
TRAF4-207ENST00000461195 SPC25Q9HBM1 224 aa26.11■■□□□ 1.77
TRAF4-207ENST00000461195 PCDHA1Q9Y5I3 950 aa26.11■■□□□ 1.77
TRAF4-207ENST00000461195 B4DLN1 442 aa26.1■■□□□ 1.77
TRAF4-207ENST00000461195 MRPL12P52815 198 aaKnown RBP26.1■■□□□ 1.77
TRAF4-207ENST00000461195 TAPT1Q6NXT6 567 aa26.1■■□□□ 1.77
TRAF4-207ENST00000461195 KLHDC9Q8NEP7 349 aa26.1■■□□□ 1.77
TRAF4-207ENST00000461195 KCNB2Q92953 911 aa26.1■■□□□ 1.77
TRAF4-207ENST00000461195 FERMT2Q96AC1 680 aa26.1■■□□□ 1.77
TRAF4-207ENST00000461195 UPF3AQ9H1J1 476 aaKnown RBP26.1■■□□□ 1.77
TRAF4-207ENST00000461195 SLC12A7Q9Y666 1083 aa26.1■■□□□ 1.77
TRAF4-207ENST00000461195 DNAH12Q6ZR08 3092 aa26.1■■□□□ 1.77
TRAF4-207ENST00000461195 PNMA6FA0A0J9YX94 578 aa26.09■■□□□ 1.77
TRAF4-207ENST00000461195 C11orf97A0A1B0GVM6 126 aaPredicted RBP26.09■■□□□ 1.77
TRAF4-207ENST00000461195 HMGB1P09429 215 aaKnown RBP26.09■■□□□ 1.77
TRAF4-207ENST00000461195 HSPA4P34932 840 aa26.09■■□□□ 1.77
TRAF4-207ENST00000461195 GNAQP50148 359 aa26.09■■□□□ 1.77
TRAF4-207ENST00000461195 GJA9P57773 515 aa26.09■■□□□ 1.77
TRAF4-207ENST00000461195 EXOSC10Q01780 885 aaKnown RBP26.09■■□□□ 1.77
TRAF4-207ENST00000461195 PDE4DQ08499 809 aa26.09■■□□□ 1.77
TRAF4-207ENST00000461195 IQSEC1Q6DN90 963 aa26.09■■□□□ 1.77
TRAF4-207ENST00000461195 SLC39A5Q6ZMH5 540 aa26.09■■□□□ 1.77
TRAF4-207ENST00000461195 NOL8Q76FK4 1167 aaKnown RBP26.09■■□□□ 1.77
TRAF4-207ENST00000461195 SGMS1Q86VZ5 419 aa26.09■■□□□ 1.77
TRAF4-207ENST00000461195 SYTL5Q8TDW5 730 aaPredicted RBP26.09■■□□□ 1.77
TRAF4-207ENST00000461195 LZTS2Q9BRK4 669 aa26.09■■□□□ 1.77
TRAF4-207ENST00000461195 SPZ1Q9BXG8 430 aa26.09■■□□□ 1.77
TRAF4-207ENST00000461195 PRO3102Q9H379 93 aa26.09■■□□□ 1.77
TRAF4-207ENST00000461195 PDGFCQ9NRA1 345 aa26.09■■□□□ 1.77
TRAF4-207ENST00000461195 C6orf222P0C671 652 aaPredicted RBP26.08■■□□□ 1.77
TRAF4-207ENST00000461195 EDNRBP24530 442 aa26.08■■□□□ 1.77
TRAF4-207ENST00000461195 CST5P28325 142 aaPredicted RBP26.08■■□□□ 1.77
TRAF4-207ENST00000461195 SMARCA1P28370 1054 aa26.08■■□□□ 1.77
TRAF4-207ENST00000461195 CFBP00751 764 aa26.07■■□□□ 1.76
TRAF4-207ENST00000461195 SYNE3Q6ZMZ3 975 aa26.07■■□□□ 1.76
TRAF4-207ENST00000461195 TCEANC2Q96MN5 208 aa26.07■■□□□ 1.76
TRAF4-207ENST00000461195 ZMYND8Q9ULU4 1186 aaPredicted RBP26.07■■□□□ 1.76
TRAF4-207ENST00000461195 GNEQ9Y223 722 aaKnown RBP26.07■■□□□ 1.76
TRAF4-207ENST00000461195 A0A1W2PQ45 241 aaPredicted RBP26.06■■□□□ 1.76
TRAF4-207ENST00000461195 A0A1W2PQY0 241 aa26.06■■□□□ 1.76
TRAF4-207ENST00000461195 MYADML2A6NDP7 307 aa26.06■■□□□ 1.76
TRAF4-207ENST00000461195 MOXD2PA6NHM9 499 aa26.06■■□□□ 1.76
TRAF4-207ENST00000461195 OPLAHO14841 1288 aa26.06■■□□□ 1.76
TRAF4-207ENST00000461195 SMPD1P17405 629 aa26.06■■□□□ 1.76
TRAF4-207ENST00000461195 RXRAP19793 462 aa26.06■■□□□ 1.76
TRAF4-207ENST00000461195 ACLYP53396 1101 aa26.06■■□□□ 1.76
TRAF4-207ENST00000461195 RTP1P59025 263 aa26.06■■□□□ 1.76
TRAF4-207ENST00000461195 SNX17Q15036 470 aa26.06■■□□□ 1.76
TRAF4-207ENST00000461195 KCNA10Q16322 511 aa26.06■■□□□ 1.76
TRAF4-207ENST00000461195 CCSAPQ6IQ19 270 aaPredicted RBP26.06■■□□□ 1.76
TRAF4-207ENST00000461195 SAMD3Q8N6K7 520 aa26.06■■□□□ 1.76
TRAF4-207ENST00000461195 PCSK9Q8NBP7 692 aaKnown RBP26.06■■□□□ 1.76
TRAF4-207ENST00000461195 NSUN6Q8TEA1 469 aaKnown RBP26.06■■□□□ 1.76
TRAF4-207ENST00000461195 RRP36Q96EU6 259 aaKnown RBP26.06■■□□□ 1.76
TRAF4-207ENST00000461195 TAAR1Q96RJ0 339 aa26.06■■□□□ 1.76
TRAF4-207ENST00000461195 MAP3K20Q9NYL2 800 aaKnown RBP26.06■■□□□ 1.76
TRAF4-207ENST00000461195 COL20A1Q9P218 1284 aa26.06■■□□□ 1.76
TRAF4-207ENST00000461195 SNX14Q9Y5W7 946 aa26.06■■□□□ 1.76
TRAF4-207ENST00000461195 EPB41L2O43491 1005 aaKnown RBP26.05■■□□□ 1.76
TRAF4-207ENST00000461195 HSD17B4P51659 736 aa26.05■■□□□ 1.76
TRAF4-207ENST00000461195 NKX3-2P78367 333 aa26.05■■□□□ 1.76
TRAF4-207ENST00000461195 GHRHRQ02643 423 aa26.05■■□□□ 1.76
TRAF4-207ENST00000461195 GNASQ5JWF2 1037 aa26.05■■□□□ 1.76
TRAF4-207ENST00000461195 TLK2Q86UE8 772 aa26.05■■□□□ 1.76
TRAF4-207ENST00000461195 FANCBQ8NB91 859 aa26.05■■□□□ 1.76
TRAF4-207ENST00000461195 PIBF1Q8WXW3 757 aa26.05■■□□□ 1.76
TRAF4-207ENST00000461195 RMDN3Q96TC7 470 aa26.05■■□□□ 1.76
TRAF4-207ENST00000461195 AP5M1Q9H0R1 490 aa26.05■■□□□ 1.76
TRAF4-207ENST00000461195 Q9Y3F1 56 aa26.05■■□□□ 1.76
TRAF4-207ENST00000461195 RBM47A0AV96 593 aaKnown RBP26.04■■□□□ 1.76
TRAF4-207ENST00000461195 PLEKHA8P1O95397 391 aa26.04■■□□□ 1.76
TRAF4-207ENST00000461195 SYN1P17600 705 aa26.04■■□□□ 1.76
TRAF4-207ENST00000461195 IRX5P78411 483 aaPredicted RBP26.04■■□□□ 1.76
TRAF4-207ENST00000461195 C1orf53Q5VUE5 145 aa26.04■■□□□ 1.76
TRAF4-207ENST00000461195 APOA5Q6Q788 366 aa26.04■■□□□ 1.76
TRAF4-207ENST00000461195 MICU3Q86XE3 530 aa26.04■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms