RNA–Protein interactions for RNA: ENST00000461113.5

HDAC4-207, Transcript of histone deacetylase 4, humanhuman

TSL 1 (best)

Gene HDAC4, Length 1,019 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-207ENST00000461113 ENAHQ8N8S7 591 aaPredicted RBP14.61□□□□□ -0.07
HDAC4-207ENST00000461113 PNMA1Q8ND90 353 aa14.61□□□□□ -0.07
HDAC4-207ENST00000461113 JAKMIP1Q96N16 626 aaKnown RBP14.61□□□□□ -0.07
HDAC4-207ENST00000461113 SLF1Q9BQI6 1058 aa14.61□□□□□ -0.07
HDAC4-207ENST00000461113 TSEN34Q9BSV6 310 aaKnown RBP14.61□□□□□ -0.07
HDAC4-207ENST00000461113 PPP1R12CQ9BZL4 782 aa14.61□□□□□ -0.07
HDAC4-207ENST00000461113 MROH8Q9H579 483 aa14.61□□□□□ -0.07
HDAC4-207ENST00000461113 TCF20Q9UGU0 1960 aaKnown RBP14.6□□□□□ -0.07
HDAC4-207ENST00000461113 ZBED4O75132 1171 aa14.6□□□□□ -0.07
HDAC4-207ENST00000461113 FDX1P10109 184 aa14.6□□□□□ -0.07
HDAC4-207ENST00000461113 DSG3P32926 999 aa14.6□□□□□ -0.07
HDAC4-207ENST00000461113 STAT2P52630 851 aa14.6□□□□□ -0.07
HDAC4-207ENST00000461113 RABGGTBP53611 331 aa14.6□□□□□ -0.07
HDAC4-207ENST00000461113 KCNA10Q16322 511 aa14.6□□□□□ -0.07
HDAC4-207ENST00000461113 GPATCH4Q5T3I0 446 aaKnown RBP14.6□□□□□ -0.07
HDAC4-207ENST00000461113 CHST3Q7LGC8 479 aa14.6□□□□□ -0.07
HDAC4-207ENST00000461113 RASEFQ8IZ41 740 aa14.6□□□□□ -0.07
HDAC4-207ENST00000461113 PRPF38AQ8NAV1 312 aaKnown RBP14.6□□□□□ -0.07
HDAC4-207ENST00000461113 KCNB2Q92953 911 aa14.6□□□□□ -0.07
HDAC4-207ENST00000461113 SNX14Q9Y5W7 946 aa14.6□□□□□ -0.07
HDAC4-207ENST00000461113 WDR19Q8NEZ3 1342 aa14.6□□□□□ -0.07
HDAC4-207ENST00000461113 MUC6Q6W4X9 2439 aa14.6□□□□□ -0.07
HDAC4-207ENST00000461113 MYH8P13535 1937 aa14.59□□□□□ -0.07
HDAC4-207ENST00000461113 TMEM232C9JQI7 657 aa14.59□□□□□ -0.07
HDAC4-207ENST00000461113 FGBP02675 491 aa14.59□□□□□ -0.07
HDAC4-207ENST00000461113 PGK2P07205 417 aa14.59□□□□□ -0.07
HDAC4-207ENST00000461113 PARP1P09874 1014 aaKnown RBP14.59□□□□□ -0.07
HDAC4-207ENST00000461113 FCER1AP12319 257 aa14.59□□□□□ -0.07
HDAC4-207ENST00000461113 AKR1A1P14550 325 aa14.59□□□□□ -0.07
HDAC4-207ENST00000461113 ANAPC15P60006 121 aa14.59□□□□□ -0.07
HDAC4-207ENST00000461113 MAPK8IP2Q13387 824 aaPredicted RBP14.59□□□□□ -0.07
HDAC4-207ENST00000461113 KIAA1755Q5JYT7 1200 aa14.59□□□□□ -0.07
HDAC4-207ENST00000461113 PPP2R2DQ66LE6 453 aa14.59□□□□□ -0.07
HDAC4-207ENST00000461113 KIFC2Q96AC6 838 aa14.59□□□□□ -0.07
HDAC4-207ENST00000461113 CHMP4CQ96CF2 233 aa14.59□□□□□ -0.07
HDAC4-207ENST00000461113 NUP88Q99567 741 aaPredicted RBP14.59□□□□□ -0.07
HDAC4-207ENST00000461113 MTIF3Q9H2K0 278 aaKnown RBP14.59□□□□□ -0.07
HDAC4-207ENST00000461113 IL23AQ9NPF7 189 aa14.59□□□□□ -0.07
HDAC4-207ENST00000461113 PPP1R9AQ9ULJ8 1098 aa14.59□□□□□ -0.07
HDAC4-207ENST00000461113 TAF6LQ9Y6J9 622 aa14.59□□□□□ -0.07
HDAC4-207ENST00000461113 CHD7Q9P2D1 2997 aa14.58□□□□□ -0.07
HDAC4-207ENST00000461113 MOXD2PA6NHM9 499 aa14.58□□□□□ -0.08
HDAC4-207ENST00000461113 RFXAPO00287 272 aa14.58□□□□□ -0.08
HDAC4-207ENST00000461113 PLA2G6O60733 806 aa14.58□□□□□ -0.08
HDAC4-207ENST00000461113 ZNF865P0CJ78 1059 aaPredicted RBP14.58□□□□□ -0.08
HDAC4-207ENST00000461113 CALM1P0DP23 149 aa14.58□□□□□ -0.08
HDAC4-207ENST00000461113 CALM2P0DP24 149 aa14.58□□□□□ -0.08
HDAC4-207ENST00000461113 CALM3P0DP25 149 aa14.58□□□□□ -0.08
HDAC4-207ENST00000461113 MYOGP15173 224 aa14.58□□□□□ -0.08
HDAC4-207ENST00000461113 CASTP20810 708 aaKnown RBP14.58□□□□□ -0.08
HDAC4-207ENST00000461113 CYP2C18P33260 490 aa14.58□□□□□ -0.08
HDAC4-207ENST00000461113 CDK7P50613 346 aa14.58□□□□□ -0.08
HDAC4-207ENST00000461113 SEC23AQ15436 765 aa14.58□□□□□ -0.08
HDAC4-207ENST00000461113 ASPRV1Q53RT3 343 aa14.58□□□□□ -0.08
HDAC4-207ENST00000461113 KCTD1Q719H9 257 aa14.58□□□□□ -0.08
HDAC4-207ENST00000461113 OTOP2Q7RTS6 562 aa14.58□□□□□ -0.08
HDAC4-207ENST00000461113 KLHDC9Q8NEP7 349 aa14.58□□□□□ -0.08
HDAC4-207ENST00000461113 TINF2Q9BSI4 451 aa14.58□□□□□ -0.08
HDAC4-207ENST00000461113 COG5Q9UP83 839 aa14.58□□□□□ -0.08
HDAC4-207ENST00000461113 SLC12A7Q9Y666 1083 aa14.58□□□□□ -0.08
HDAC4-207ENST00000461113 CYP46A1Q9Y6A2 500 aa14.58□□□□□ -0.08
HDAC4-207ENST00000461113 MTCH2Q9Y6C9 303 aa14.58□□□□□ -0.08
HDAC4-207ENST00000461113 PLXNA1Q9UIW2 1896 aa14.58□□□□□ -0.08
HDAC4-207ENST00000461113 MROH7Q68CQ1 1323 aa14.58□□□□□ -0.08
HDAC4-207ENST00000461113 SYNRGQ9UMZ2 1314 aa14.58□□□□□ -0.08
HDAC4-207ENST00000461113 ZNF236Q9UL36 1845 aa14.57□□□□□ -0.08
HDAC4-207ENST00000461113 PI4K2BG5E9Z4 385 aa14.57□□□□□ -0.08
HDAC4-207ENST00000461113 PDHBP11177 359 aa14.57□□□□□ -0.08
HDAC4-207ENST00000461113 KIF5BP33176 963 aa14.57□□□□□ -0.08
HDAC4-207ENST00000461113 COPB2P35606 906 aa14.57□□□□□ -0.08
HDAC4-207ENST00000461113 LIFRP42702 1097 aa14.57□□□□□ -0.08
HDAC4-207ENST00000461113 C8orf34Q49A92 452 aa14.57□□□□□ -0.08
HDAC4-207ENST00000461113 CCSAPQ6IQ19 270 aaPredicted RBP14.57□□□□□ -0.08
HDAC4-207ENST00000461113 CTCFLQ8NI51 663 aaPredicted RBP14.57□□□□□ -0.08
HDAC4-207ENST00000461113 IGDCC4Q8TDY8 1250 aa14.57□□□□□ -0.08
HDAC4-207ENST00000461113 VTI1AQ96AJ9 217 aa14.57□□□□□ -0.08
HDAC4-207ENST00000461113 GLT1D1Q96MS3 346 aa14.57□□□□□ -0.08
HDAC4-207ENST00000461113 TM6SF1Q9BZW5 370 aa14.57□□□□□ -0.08
HDAC4-207ENST00000461113 GPCPD1Q9NPB8 672 aa14.57□□□□□ -0.08
HDAC4-207ENST00000461113 PNMA2Q9UL42 364 aa14.57□□□□□ -0.08
HDAC4-207ENST00000461113 NAP1L2Q9ULW6 460 aaPredicted RBP14.57□□□□□ -0.08
HDAC4-207ENST00000461113 REV3LO60673 3130 aa14.57□□□□□ -0.08
HDAC4-207ENST00000461113 MYADML2A6NDP7 307 aa14.56□□□□□ -0.08
HDAC4-207ENST00000461113 SH2B2O14492 632 aaPredicted RBP14.56□□□□□ -0.08
HDAC4-207ENST00000461113 GTPBP6O43824 516 aaPredicted RBP14.56□□□□□ -0.08
HDAC4-207ENST00000461113 DHX16O60231 1041 aaKnown RBP14.56□□□□□ -0.08
HDAC4-207ENST00000461113 DDAH1O94760 285 aa14.56□□□□□ -0.08
HDAC4-207ENST00000461113 GNAQP50148 359 aa14.56□□□□□ -0.08
HDAC4-207ENST00000461113 ANTXR2P58335 489 aa14.56□□□□□ -0.08
HDAC4-207ENST00000461113 IRX5P78411 483 aaPredicted RBP14.56□□□□□ -0.08
HDAC4-207ENST00000461113 ZNF543Q08ER8 600 aa14.56□□□□□ -0.08
HDAC4-207ENST00000461113 ADCK5Q3MIX3 580 aa14.56□□□□□ -0.08
HDAC4-207ENST00000461113 ATG4CQ96DT6 458 aa14.56□□□□□ -0.08
HDAC4-207ENST00000461113 MMP19Q99542 508 aa14.56□□□□□ -0.08
HDAC4-207ENST00000461113 CD320Q9NPF0 282 aa14.56□□□□□ -0.08
HDAC4-207ENST00000461113 FBXO28Q9NVF7 368 aa14.56□□□□□ -0.08
HDAC4-207ENST00000461113 CNPY2Q9Y2B0 182 aa14.56□□□□□ -0.08
HDAC4-207ENST00000461113 ELP1O95163 1332 aa14.56□□□□□ -0.08
HDAC4-207ENST00000461113 FRMPD2Q68DX3 1309 aaPredicted RBP14.56□□□□□ -0.08
HDAC4-207ENST00000461113 LAMA4Q16363 1823 aa14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms