RNA–Protein interactions for RNA: ENST00000460886.1

COL6A2-207, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 2

Gene COL6A2, Length 306 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-207ENST00000460886 SLC43A3Q8NBI5 491 aa11.06□□□□□ -0.64
COL6A2-207ENST00000460886 ANKS1AQ92625 1134 aa11.06□□□□□ -0.64
COL6A2-207ENST00000460886 RNPC3Q96LT9 517 aaKnown RBP11.06□□□□□ -0.64
COL6A2-207ENST00000460886 COL25A1Q9BXS0 654 aaPredicted RBP11.06□□□□□ -0.64
COL6A2-207ENST00000460886 KAT14Q9H8E8 782 aa11.06□□□□□ -0.64
COL6A2-207ENST00000460886 SPC25Q9HBM1 224 aa11.06□□□□□ -0.64
COL6A2-207ENST00000460886 CTDP1Q9Y5B0 961 aaPredicted RBP11.06□□□□□ -0.64
COL6A2-207ENST00000460886 ASTN1O14525 1302 aa11.06□□□□□ -0.64
COL6A2-207ENST00000460886 MUC3AQ02505 3323 aa11.06□□□□□ -0.64
COL6A2-207ENST00000460886 A0A0U1RQG5 324 aaPredicted RBP11.05□□□□□ -0.64
COL6A2-207ENST00000460886 SOWAHBA6NEL2 793 aa11.05□□□□□ -0.64
COL6A2-207ENST00000460886 ARVCFO00192 962 aa11.05□□□□□ -0.64
COL6A2-207ENST00000460886 EPB41L2O43491 1005 aaKnown RBP11.05□□□□□ -0.64
COL6A2-207ENST00000460886 PRC1O43663 620 aa11.05□□□□□ -0.64
COL6A2-207ENST00000460886 CD4P01730 458 aa11.05□□□□□ -0.64
COL6A2-207ENST00000460886 C6orf222P0C671 652 aaPredicted RBP11.05□□□□□ -0.64
COL6A2-207ENST00000460886 MCM5P33992 734 aa11.05□□□□□ -0.64
COL6A2-207ENST00000460886 IRX5P78411 483 aaPredicted RBP11.05□□□□□ -0.64
COL6A2-207ENST00000460886 CNTN2Q02246 1040 aa11.05□□□□□ -0.64
COL6A2-207ENST00000460886 KRT32Q14532 448 aa11.05□□□□□ -0.64
COL6A2-207ENST00000460886 SEC23AQ15436 765 aa11.05□□□□□ -0.64
COL6A2-207ENST00000460886 CCDC96Q2M329 555 aa11.05□□□□□ -0.64
COL6A2-207ENST00000460886 TMEM67Q5HYA8 995 aa11.05□□□□□ -0.64
COL6A2-207ENST00000460886 KCTD1Q719H9 257 aa11.05□□□□□ -0.64
COL6A2-207ENST00000460886 PNMA1Q8ND90 353 aa11.05□□□□□ -0.64
COL6A2-207ENST00000460886 MORC4Q8TE76 937 aa11.05□□□□□ -0.64
COL6A2-207ENST00000460886 KCNB2Q92953 911 aa11.05□□□□□ -0.64
COL6A2-207ENST00000460886 NEK1Q96PY6 1258 aa11.05□□□□□ -0.64
COL6A2-207ENST00000460886 RNF146Q9NTX7 359 aa11.05□□□□□ -0.64
COL6A2-207ENST00000460886 GNEQ9Y223 722 aaKnown RBP11.05□□□□□ -0.64
COL6A2-207ENST00000460886 SNX14Q9Y5W7 946 aa11.05□□□□□ -0.64
COL6A2-207ENST00000460886 LOC102724159A0A0B4J2E5 919 aa11.04□□□□□ -0.64
COL6A2-207ENST00000460886 HSFX4A0A1B0GTS1 333 aaPredicted RBP11.04□□□□□ -0.64
COL6A2-207ENST00000460886 HSFX3A0A1B0GWH4 333 aaPredicted RBP11.04□□□□□ -0.64
COL6A2-207ENST00000460886 ASB14A6NK59 587 aa11.04□□□□□ -0.64
COL6A2-207ENST00000460886 PDHBP11177 359 aa11.04□□□□□ -0.64
COL6A2-207ENST00000460886 IKQ13123 557 aaPredicted RBP11.04□□□□□ -0.64
COL6A2-207ENST00000460886 WTAPQ15007 396 aa11.04□□□□□ -0.64
COL6A2-207ENST00000460886 PWP2Q15269 919 aaKnown RBP11.04□□□□□ -0.64
COL6A2-207ENST00000460886 GNASQ5JWF2 1037 aa11.04□□□□□ -0.64
COL6A2-207ENST00000460886 BTNL9Q6UXG8 535 aa11.04□□□□□ -0.64
COL6A2-207ENST00000460886 C16orf59Q7L2K0 433 aa11.04□□□□□ -0.64
COL6A2-207ENST00000460886 MAFAQ8NHW3 353 aaPredicted RBP11.04□□□□□ -0.64
COL6A2-207ENST00000460886 IGDCC4Q8TDY8 1250 aa11.04□□□□□ -0.64
COL6A2-207ENST00000460886 DCAF4Q8WV16 495 aa11.04□□□□□ -0.64
COL6A2-207ENST00000460886 AGBL1Q96MI9 1066 aa11.04□□□□□ -0.64
COL6A2-207ENST00000460886 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.04□□□□□ -0.64
COL6A2-207ENST00000460886 SEZ6LQ9BYH1 1024 aa11.04□□□□□ -0.64
COL6A2-207ENST00000460886 LRRC2Q9BYS8 371 aa11.04□□□□□ -0.64
COL6A2-207ENST00000460886 SENP2Q9HC62 589 aa11.04□□□□□ -0.64
COL6A2-207ENST00000460886 GPCPD1Q9NPB8 672 aa11.04□□□□□ -0.64
COL6A2-207ENST00000460886 HOMER2Q9NSB8 354 aa11.04□□□□□ -0.64
COL6A2-207ENST00000460886 CYP39A1Q9NYL5 469 aa11.04□□□□□ -0.64
COL6A2-207ENST00000460886 PRR12Q9ULL5 1215 aa11.04□□□□□ -0.64
COL6A2-207ENST00000460886 Q9Y3F1 56 aa11.04□□□□□ -0.64
COL6A2-207ENST00000460886 TTC28Q96AY4 2481 aa11.04□□□□□ -0.64
COL6A2-207ENST00000460886 FRMPD2Q68DX3 1309 aaPredicted RBP11.04□□□□□ -0.64
COL6A2-207ENST00000460886 C11orf97A0A1B0GVM6 126 aaPredicted RBP11.03□□□□□ -0.64
COL6A2-207ENST00000460886 EIF5BO60841 1220 aaKnown RBP11.03□□□□□ -0.64
COL6A2-207ENST00000460886 CABYRO75952 493 aa11.03□□□□□ -0.64
COL6A2-207ENST00000460886 SEC24BO95487 1268 aa11.03□□□□□ -0.64
COL6A2-207ENST00000460886 ICAM1P05362 532 aa11.03□□□□□ -0.64
COL6A2-207ENST00000460886 DNAJB2P25686 324 aa11.03□□□□□ -0.64
COL6A2-207ENST00000460886 SLC4A3P48751 1232 aa11.03□□□□□ -0.64
COL6A2-207ENST00000460886 TNFAIP2Q03169 654 aa11.03□□□□□ -0.64
COL6A2-207ENST00000460886 PPIGQ13427 754 aaKnown RBP eCLIP11.03□□□□□ -0.64
COL6A2-207ENST00000460886 C8orf34Q49A92 452 aa11.03□□□□□ -0.64
COL6A2-207ENST00000460886 TMEM240Q5SV17 173 aa11.03□□□□□ -0.64
COL6A2-207ENST00000460886 TTBK2Q6IQ55 1244 aa11.03□□□□□ -0.64
COL6A2-207ENST00000460886 TAPT1Q6NXT6 567 aa11.03□□□□□ -0.64
COL6A2-207ENST00000460886 DHX32Q7L7V1 743 aaKnown RBP11.03□□□□□ -0.64
COL6A2-207ENST00000460886 MYLIPQ8WY64 445 aa11.03□□□□□ -0.64
COL6A2-207ENST00000460886 TMEM87BQ96K49 555 aa11.03□□□□□ -0.64
COL6A2-207ENST00000460886 TCEANC2Q96MN5 208 aa11.03□□□□□ -0.64
COL6A2-207ENST00000460886 JAKMIP1Q96N16 626 aaKnown RBP11.03□□□□□ -0.64
COL6A2-207ENST00000460886 TRERF1Q96PN7 1200 aa11.03□□□□□ -0.64
COL6A2-207ENST00000460886 RANBP17Q9H2T7 1088 aaKnown RBP11.03□□□□□ -0.64
COL6A2-207ENST00000460886 GPHNQ9NQX3 736 aaPredicted RBP11.03□□□□□ -0.64
COL6A2-207ENST00000460886 CHD7Q9P2D1 2997 aa11.03□□□□□ -0.64
COL6A2-207ENST00000460886 SH2B2O14492 632 aaPredicted RBP11.02□□□□□ -0.65
COL6A2-207ENST00000460886 HMGB1P09429 215 aaKnown RBP11.02□□□□□ -0.65
COL6A2-207ENST00000460886 GOLGA8HP0CJ92 632 aa11.02□□□□□ -0.65
COL6A2-207ENST00000460886 SNHG28P0DPA3 235 aa11.02□□□□□ -0.65
COL6A2-207ENST00000460886 ALAS1P13196 640 aa11.02□□□□□ -0.65
COL6A2-207ENST00000460886 CPA1P15085 419 aa11.02□□□□□ -0.65
COL6A2-207ENST00000460886 SLC16A2P36021 539 aa11.02□□□□□ -0.65
COL6A2-207ENST00000460886 EXOSC10Q01780 885 aaKnown RBP11.02□□□□□ -0.65
COL6A2-207ENST00000460886 ZNF543Q08ER8 600 aa11.02□□□□□ -0.65
COL6A2-207ENST00000460886 MUM1L1Q5H9M0 696 aa11.02□□□□□ -0.65
COL6A2-207ENST00000460886 IQSEC1Q6DN90 963 aa11.02□□□□□ -0.65
COL6A2-207ENST00000460886 PSRC1Q6PGN9 363 aaPredicted RBP11.02□□□□□ -0.65
COL6A2-207ENST00000460886 CCDC174Q6PII3 467 aa11.02□□□□□ -0.65
COL6A2-207ENST00000460886 NFXL1Q6ZNB6 911 aa11.02□□□□□ -0.65
COL6A2-207ENST00000460886 TLK2Q86UE8 772 aa11.02□□□□□ -0.65
COL6A2-207ENST00000460886 MTA3Q9BTC8 594 aa11.02□□□□□ -0.65
COL6A2-207ENST00000460886 LY9Q9HBG7 655 aa11.02□□□□□ -0.65
COL6A2-207ENST00000460886 VTA1Q9NP79 307 aa11.02□□□□□ -0.65
COL6A2-207ENST00000460886 GRIN2DO15399 1336 aa11.02□□□□□ -0.65
COL6A2-207ENST00000460886 TRANK1O15050 2925 aa11.01□□□□□ -0.65
COL6A2-207ENST00000460886 CCDC69A6NI79 296 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms