RNA–Protein interactions for RNA: ENST00000460827.1

PCYT1A-213, Transcript of phosphate cytidylyltransferase 1, choline, alpha, human

TSL 2

Gene PCYT1A, Length 562 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PCYT1A-213	ENST00000460827	RNF146	Q9NTX7	359 aa		13.89	□□□□□ -0.19
PCYT1A-213	ENST00000460827	MTMR4	Q9NYA4	1195 aa		13.89	□□□□□ -0.19
PCYT1A-213	ENST00000460827	SYNPO2	Q9UMS6	1093 aa		13.89	□□□□□ -0.19
PCYT1A-213	ENST00000460827	COG6	Q9Y2V7	657 aa		13.89	□□□□□ -0.19
PCYT1A-213	ENST00000460827	TNKS	O95271	1327 aa		13.89	□□□□□ -0.19
PCYT1A-213	ENST00000460827	FDX1	P10109	184 aa		13.88	□□□□□ -0.19
PCYT1A-213	ENST00000460827	EEPD1	Q7L9B9	569 aa		13.88	□□□□□ -0.19
PCYT1A-213	ENST00000460827	HERC6	Q8IVU3	1022 aa		13.88	□□□□□ -0.19
PCYT1A-213	ENST00000460827	RPAP2	Q8IXW5	612 aa	Predicted RBP	13.88	□□□□□ -0.19
PCYT1A-213	ENST00000460827	LRRC47	Q8N1G4	583 aa	Known RBP	13.88	□□□□□ -0.19
PCYT1A-213	ENST00000460827	SPTBN4	Q9H254	2564 aa		13.87	□□□□□ -0.19
PCYT1A-213	ENST00000460827	TMEM232	C9JQI7	657 aa		13.87	□□□□□ -0.19
PCYT1A-213	ENST00000460827	SUPT20HL2	P0C7V6	817 aa		13.87	□□□□□ -0.19
PCYT1A-213	ENST00000460827	BMP3	P12645	472 aa		13.87	□□□□□ -0.19
PCYT1A-213	ENST00000460827	GIMAP6	Q6P9H5	292 aa		13.87	□□□□□ -0.19
PCYT1A-213	ENST00000460827	ALYREF	Q86V81	257 aa	Known RBP	13.87	□□□□□ -0.19
PCYT1A-213	ENST00000460827	SIRT2	Q8IXJ6	389 aa		13.87	□□□□□ -0.19
PCYT1A-213	ENST00000460827	MORC4	Q8TE76	937 aa		13.87	□□□□□ -0.19
PCYT1A-213	ENST00000460827	PURB	Q96QR8	312 aa	Known RBP	13.87	□□□□□ -0.19
PCYT1A-213	ENST00000460827	BCL11A	Q9H165	835 aa		13.87	□□□□□ -0.19
PCYT1A-213	ENST00000460827	CYP39A1	Q9NYL5	469 aa		13.87	□□□□□ -0.19
PCYT1A-213	ENST00000460827	MINDY4B	A8MYZ0	360 aa		13.86	□□□□□ -0.19
PCYT1A-213	ENST00000460827	PRDM1	O75626	825 aa		13.86	□□□□□ -0.19
PCYT1A-213	ENST00000460827	TTLL1	O95922	423 aa		13.86	□□□□□ -0.19
PCYT1A-213	ENST00000460827	ACTN1	P12814	892 aa		13.86	□□□□□ -0.19
PCYT1A-213	ENST00000460827	RFC2	P35250	354 aa		13.86	□□□□□ -0.19
PCYT1A-213	ENST00000460827	STAT2	P52630	851 aa		13.86	□□□□□ -0.19
PCYT1A-213	ENST00000460827	PURA	Q00577	322 aa	Known RBP	13.86	□□□□□ -0.19
PCYT1A-213	ENST00000460827	TKFC	Q3LXA3	575 aa		13.86	□□□□□ -0.19
PCYT1A-213	ENST00000460827	DUSP28	Q4G0W2	176 aa		13.86	□□□□□ -0.19
PCYT1A-213	ENST00000460827	MUM1L1	Q5H9M0	696 aa		13.86	□□□□□ -0.19
PCYT1A-213	ENST00000460827	SLFN13	Q68D06	897 aa		13.86	□□□□□ -0.19
PCYT1A-213	ENST00000460827	TRERF1	Q96PN7	1200 aa		13.86	□□□□□ -0.19
PCYT1A-213	ENST00000460827	EPB41L4A	Q9HCS5	686 aa	Predicted RBP	13.86	□□□□□ -0.19
PCYT1A-213	ENST00000460827	VTA1	Q9NP79	307 aa		13.86	□□□□□ -0.19
PCYT1A-213	ENST00000460827	ZDBF2	Q9HCK1	2354 aa		13.86	□□□□□ -0.19
PCYT1A-213	ENST00000460827	CACNA1H	O95180	2353 aa		13.85	□□□□□ -0.19
PCYT1A-213	ENST00000460827	LCHN	A4D1U4	455 aa		13.85	□□□□□ -0.19
PCYT1A-213	ENST00000460827	IQCF3	P0C7M6	154 aa		13.85	□□□□□ -0.19
PCYT1A-213	ENST00000460827	ALAS1	P13196	640 aa		13.85	□□□□□ -0.19
PCYT1A-213	ENST00000460827	ZSCAN25	Q6NSZ9	544 aa		13.85	□□□□□ -0.19
PCYT1A-213	ENST00000460827	KIAA1211	Q6ZU35	1233 aa		13.85	□□□□□ -0.19
PCYT1A-213	ENST00000460827	PANK1	Q8TE04	598 aa		13.85	□□□□□ -0.19
PCYT1A-213	ENST00000460827	PPP1R13L	Q8WUF5	828 aa		13.85	□□□□□ -0.19
PCYT1A-213	ENST00000460827	POLR3E	Q9NVU0	708 aa		13.85	□□□□□ -0.19
PCYT1A-213	ENST00000460827	PLIN4	Q96Q06	1357 aa		13.84	□□□□□ -0.19
PCYT1A-213	ENST00000460827	PRR33	A8MZF0	331 aa		13.84	□□□□□ -0.19
PCYT1A-213	ENST00000460827	KIF28P	B7ZC32	967 aa		13.84	□□□□□ -0.19
PCYT1A-213	ENST00000460827	SNAP25	P60880	206 aa		13.84	□□□□□ -0.19
PCYT1A-213	ENST00000460827	NBPF20	Q3BBV1	942 aa		13.84	□□□□□ -0.19
PCYT1A-213	ENST00000460827	FAM160B2	Q86V87	743 aa		13.84	□□□□□ -0.19
PCYT1A-213	ENST00000460827	ZNF444	Q8N0Y2	327 aa	Predicted RBP	13.84	□□□□□ -0.19
PCYT1A-213	ENST00000460827	GDPD5	Q8WTR4	605 aa		13.84	□□□□□ -0.19
PCYT1A-213	ENST00000460827	CHURC1	Q8WUH1	139 aa		13.84	□□□□□ -0.19
PCYT1A-213	ENST00000460827	STAG1	Q8WVM7	1258 aa		13.84	□□□□□ -0.19
PCYT1A-213	ENST00000460827	OSBP2	Q969R2	916 aa		13.84	□□□□□ -0.19
PCYT1A-213	ENST00000460827	GMCL1	Q96IK5	515 aa		13.84	□□□□□ -0.19
PCYT1A-213	ENST00000460827	MTG1	Q9BT17	334 aa	Predicted RBP	13.84	□□□□□ -0.19
PCYT1A-213	ENST00000460827	LMCD1	Q9NZU5	365 aa		13.84	□□□□□ -0.19
PCYT1A-213	ENST00000460827	SI	P14410	1827 aa		13.83	□□□□□ -0.2
PCYT1A-213	ENST00000460827	PPAN-P2RY11	A0A0B4J1V8	794 aa	Predicted RBP	13.83	□□□□□ -0.2
PCYT1A-213	ENST00000460827	RBM47	A0AV96	593 aa	Known RBP	13.83	□□□□□ -0.2
PCYT1A-213	ENST00000460827	PLA2G6	O60733	806 aa		13.83	□□□□□ -0.2
PCYT1A-213	ENST00000460827	RAB11FIP3	O75154	756 aa		13.83	□□□□□ -0.2
PCYT1A-213	ENST00000460827	BAIAP3	O94812	1187 aa		13.83	□□□□□ -0.2
PCYT1A-213	ENST00000460827	MYL3	P08590	195 aa		13.83	□□□□□ -0.2
PCYT1A-213	ENST00000460827	NFRKB	Q6P4R8	1299 aa		13.83	□□□□□ -0.2
PCYT1A-213	ENST00000460827	FAM178B	Q8IXR5	827 aa		13.83	□□□□□ -0.2
PCYT1A-213	ENST00000460827	NEDD1	Q8NHV4	660 aa		13.83	□□□□□ -0.2
PCYT1A-213	ENST00000460827	WDR11	Q9BZH6	1224 aa		13.83	□□□□□ -0.2
PCYT1A-213	ENST00000460827	FTO	Q9C0B1	505 aa	Known RBP eCLIP	13.83	□□□□□ -0.2
PCYT1A-213	ENST00000460827	UBE2Z	Q9H832	354 aa	Predicted RBP	13.83	□□□□□ -0.2
PCYT1A-213	ENST00000460827	ZFHX2	Q9C0A1	2572 aa	Predicted RBP	13.83	□□□□□ -0.2
PCYT1A-213	ENST00000460827	VPS13A	Q96RL7	3174 aa		13.82	□□□□□ -0.2
PCYT1A-213	ENST00000460827	MCC	P23508	829 aa		13.82	□□□□□ -0.2
PCYT1A-213	ENST00000460827	CPT1A	P50416	773 aa		13.82	□□□□□ -0.2
PCYT1A-213	ENST00000460827	GPNMB	Q14956	572 aa		13.82	□□□□□ -0.2
PCYT1A-213	ENST00000460827	NSMF	Q6X4W1	530 aa		13.82	□□□□□ -0.2
PCYT1A-213	ENST00000460827	RASGRP2	Q7LDG7	609 aa		13.82	□□□□□ -0.2
PCYT1A-213	ENST00000460827	TMCO2	Q7Z6W1	182 aa	Predicted RBP	13.82	□□□□□ -0.2
PCYT1A-213	ENST00000460827	GJD3	Q8N144	294 aa		13.82	□□□□□ -0.2
PCYT1A-213	ENST00000460827	RETREG2	Q8NC44	543 aa		13.82	□□□□□ -0.2
PCYT1A-213	ENST00000460827	CHMP4C	Q96CF2	233 aa		13.82	□□□□□ -0.2
PCYT1A-213	ENST00000460827	ZNF287	Q9HBT7	754 aa		13.82	□□□□□ -0.2
PCYT1A-213	ENST00000460827	ISY1	Q9ULR0	285 aa	Known RBP	13.82	□□□□□ -0.2
PCYT1A-213	ENST00000460827	HMMR	O75330	724 aa		13.81	□□□□□ -0.2
PCYT1A-213	ENST00000460827	TSPY3	P0CV98	308 aa		13.81	□□□□□ -0.2
PCYT1A-213	ENST00000460827	TSPY8	P0CW00	308 aa		13.81	□□□□□ -0.2
PCYT1A-213	ENST00000460827	SLC1A4	P43007	532 aa		13.81	□□□□□ -0.2
PCYT1A-213	ENST00000460827	ALDH5A1	P51649	535 aa	Predicted RBP	13.81	□□□□□ -0.2
PCYT1A-213	ENST00000460827	WDR5	P61964	334 aa	Known RBP	13.81	□□□□□ -0.2
PCYT1A-213	ENST00000460827	IK	Q13123	557 aa	Predicted RBP	13.81	□□□□□ -0.2
PCYT1A-213	ENST00000460827	LEXM	Q3ZCV2	418 aa		13.81	□□□□□ -0.2
PCYT1A-213	ENST00000460827	FAM47C	Q5HY64	1035 aa		13.81	□□□□□ -0.2
PCYT1A-213	ENST00000460827	KCTD1	Q719H9	257 aa		13.81	□□□□□ -0.2
PCYT1A-213	ENST00000460827	OR6J1	Q8NGC5	347 aa		13.81	□□□□□ -0.2
PCYT1A-213	ENST00000460827	CTAGE1	Q96RT6	745 aa		13.81	□□□□□ -0.2
PCYT1A-213	ENST00000460827	SUGCT	Q9HAC7	445 aa		13.81	□□□□□ -0.2
PCYT1A-213	ENST00000460827	PRR12	Q9ULL5	1215 aa		13.81	□□□□□ -0.2
PCYT1A-213	ENST00000460827		A6NJR5	290 aa		13.8	□□□□□ -0.2

Retrieved 100 of 20,778 RNA–protein pairs in 89.7 ms