RNA–Protein interactions for RNA: ENST00000460616.5

SSR4-206, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 2

Gene SSR4, Length 2,482 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-206ENST00000460616 TTC38Q5R3I4 469 aa17.22■□□□□ 0.35
SSR4-206ENST00000460616 COL23A1Q86Y22 540 aaPredicted RBP17.22■□□□□ 0.35
SSR4-206ENST00000460616 ADSSL1Q8N142 457 aa17.22■□□□□ 0.35
SSR4-206ENST00000460616 OSBPL9Q96SU4 736 aa17.22■□□□□ 0.35
SSR4-206ENST00000460616 VCPKMTQ9H867 229 aa17.22■□□□□ 0.35
SSR4-206ENST00000460616 MCM8Q9UJA3 840 aa17.22■□□□□ 0.35
SSR4-206ENST00000460616 NIP7Q9Y221 180 aaKnown RBP eCLIP17.22■□□□□ 0.35
SSR4-206ENST00000460616 SRGNP10124 158 aa17.21■□□□□ 0.35
SSR4-206ENST00000460616 ATP2C1P98194 919 aaPredicted RBP17.21■□□□□ 0.35
SSR4-206ENST00000460616 CFAP58Q5T655 872 aa17.21■□□□□ 0.35
SSR4-206ENST00000460616 HAUS3Q68CZ6 603 aa17.21■□□□□ 0.35
SSR4-206ENST00000460616 IQCKQ8N0W5 287 aa17.21■□□□□ 0.35
SSR4-206ENST00000460616 RETREG2Q8NC44 543 aa17.21■□□□□ 0.35
SSR4-206ENST00000460616 FAM89AQ96GI7 184 aa17.21■□□□□ 0.35
SSR4-206ENST00000460616 CCDC42Q96M95 316 aa17.21■□□□□ 0.35
SSR4-206ENST00000460616 CCT8L2Q96SF2 557 aa17.21■□□□□ 0.35
SSR4-206ENST00000460616 THAP9Q9H5L6 903 aa17.21■□□□□ 0.35
SSR4-206ENST00000460616 POLD4Q9HCU8 107 aa17.21■□□□□ 0.35
SSR4-206ENST00000460616 CASZ1Q86V15 1759 aa17.21■□□□□ 0.35
SSR4-206ENST00000460616 COL24A1Q17RW2 1714 aa17.21■□□□□ 0.35
SSR4-206ENST00000460616 PRDM1O75626 825 aa17.21■□□□□ 0.34
SSR4-206ENST00000460616 PPP1R37O75864 691 aa17.21■□□□□ 0.34
SSR4-206ENST00000460616 TCP1P17987 556 aaKnown RBP17.21■□□□□ 0.34
SSR4-206ENST00000460616 TNFRSF8P28908 595 aa17.21■□□□□ 0.34
SSR4-206ENST00000460616 CXCR5P32302 372 aa17.21■□□□□ 0.34
SSR4-206ENST00000460616 PAFAH1B1P43034 410 aa17.21■□□□□ 0.34
SSR4-206ENST00000460616 PMS1P54277 932 aaKnown RBP17.21■□□□□ 0.34
SSR4-206ENST00000460616 PTGISQ16647 500 aa17.21■□□□□ 0.34
SSR4-206ENST00000460616 PREPLQ4J6C6 727 aaPredicted RBP17.21■□□□□ 0.34
SSR4-206ENST00000460616 EMC10Q5UCC4 262 aa17.21■□□□□ 0.34
SSR4-206ENST00000460616 ZNF622Q969S3 477 aaKnown RBP eCLIP17.21■□□□□ 0.34
SSR4-206ENST00000460616 ZNF512BQ96KM6 892 aaPredicted RBP17.21■□□□□ 0.34
SSR4-206ENST00000460616 TTYH3Q9C0H2 523 aa17.21■□□□□ 0.34
SSR4-206ENST00000460616 PDGFDQ9GZP0 370 aaPredicted RBP17.21■□□□□ 0.34
SSR4-206ENST00000460616 EXOC1Q9NV70 894 aa17.21■□□□□ 0.34
SSR4-206ENST00000460616 CAPN6Q9Y6Q1 641 aa17.21■□□□□ 0.34
SSR4-206ENST00000460616 RASSF9O75901 435 aa17.2■□□□□ 0.34
SSR4-206ENST00000460616 ELF1P32519 619 aa17.2■□□□□ 0.34
SSR4-206ENST00000460616 NF2P35240 595 aa17.2■□□□□ 0.34
SSR4-206ENST00000460616 TDO2P48775 406 aa17.2■□□□□ 0.34
SSR4-206ENST00000460616 RCAN1P53805 252 aa17.2■□□□□ 0.34
SSR4-206ENST00000460616 APBA1Q02410 837 aa17.2■□□□□ 0.34
SSR4-206ENST00000460616 IFT88Q13099 833 aa17.2■□□□□ 0.34
SSR4-206ENST00000460616 PLCB4Q15147 1175 aa17.2■□□□□ 0.34
SSR4-206ENST00000460616 PKN1Q16512 942 aa17.2■□□□□ 0.34
SSR4-206ENST00000460616 SUSD4Q5VX71 490 aa17.2■□□□□ 0.34
SSR4-206ENST00000460616 C8orf74Q6P047 294 aa17.2■□□□□ 0.34
SSR4-206ENST00000460616 CCDC13Q8IYE1 715 aa17.2■□□□□ 0.34
SSR4-206ENST00000460616 PCMTD1Q96MG8 357 aaPredicted RBP17.2■□□□□ 0.34
SSR4-206ENST00000460616 CCDC43Q96MW1 224 aaKnown RBP17.2■□□□□ 0.34
SSR4-206ENST00000460616 PSMB7Q99436 277 aa17.2■□□□□ 0.34
SSR4-206ENST00000460616 CENPHQ9H3R5 247 aa17.2■□□□□ 0.34
SSR4-206ENST00000460616 hCG_1642624A0A1W2PR95 340 aa17.2■□□□□ 0.34
SSR4-206ENST00000460616 ZNF233A6NK53 670 aa17.2■□□□□ 0.34
SSR4-206ENST00000460616 RASSF10A6NK89 507 aa17.2■□□□□ 0.34
SSR4-206ENST00000460616 ADRA2BP18089 450 aa17.2■□□□□ 0.34
SSR4-206ENST00000460616 KLK7P49862 253 aa17.2■□□□□ 0.34
SSR4-206ENST00000460616 CDR1P51861 262 aa17.2■□□□□ 0.34
SSR4-206ENST00000460616 SEC24CP53992 1094 aa17.2■□□□□ 0.34
SSR4-206ENST00000460616 TBC1D8BQ0IIM8 1120 aa17.2■□□□□ 0.34
SSR4-206ENST00000460616 SLC15A2Q16348 729 aa17.2■□□□□ 0.34
SSR4-206ENST00000460616 NFRKBQ6P4R8 1299 aa17.2■□□□□ 0.34
SSR4-206ENST00000460616 KRT26Q7Z3Y9 468 aa17.2■□□□□ 0.34
SSR4-206ENST00000460616 NLRP14Q86W24 1093 aa17.2■□□□□ 0.34
SSR4-206ENST00000460616 TRIM47Q96LD4 638 aa17.2■□□□□ 0.34
SSR4-206ENST00000460616 TUBGCP2Q9BSJ2 902 aa17.2■□□□□ 0.34
SSR4-206ENST00000460616 SMARCAL1Q9NZC9 954 aa17.2■□□□□ 0.34
SSR4-206ENST00000460616 GGA2Q9UJY4 613 aa17.2■□□□□ 0.34
SSR4-206ENST00000460616 QSER1Q2KHR3 1735 aa17.19■□□□□ 0.34
SSR4-206ENST00000460616 ZNF263O14978 683 aa17.19■□□□□ 0.34
SSR4-206ENST00000460616 MBD4O95243 580 aa17.19■□□□□ 0.34
SSR4-206ENST00000460616 MOCS3O95396 460 aa17.19■□□□□ 0.34
SSR4-206ENST00000460616 GYS1P13807 737 aa17.19■□□□□ 0.34
SSR4-206ENST00000460616 NR1D1P20393 614 aa17.19■□□□□ 0.34
SSR4-206ENST00000460616 LDHAL6AQ6ZMR3 332 aa17.19■□□□□ 0.34
SSR4-206ENST00000460616 IFT20Q8IY31 132 aa17.19■□□□□ 0.34
SSR4-206ENST00000460616 MYCBPAPQ8TBZ2 947 aa17.19■□□□□ 0.34
SSR4-206ENST00000460616 MLXIPQ9HAP2 919 aa17.19■□□□□ 0.34
SSR4-206ENST00000460616 RIPOR2Q9Y4F9 1068 aa17.19■□□□□ 0.34
SSR4-206ENST00000460616 HYOU1Q9Y4L1 999 aa17.19■□□□□ 0.34
SSR4-206ENST00000460616 CDK17Q00537 523 aa17.19■□□□□ 0.34
SSR4-206ENST00000460616 TRIM28Q13263 835 aaKnown RBP17.19■□□□□ 0.34
SSR4-206ENST00000460616 GLE1Q53GS7 698 aaKnown RBP17.19■□□□□ 0.34
SSR4-206ENST00000460616 CEP85LQ5SZL2 805 aa17.19■□□□□ 0.34
SSR4-206ENST00000460616 CCDC125Q86Z20 511 aa17.19■□□□□ 0.34
SSR4-206ENST00000460616 FAM212AQ96EL1 285 aa17.19■□□□□ 0.34
SSR4-206ENST00000460616 IFIH1Q9BYX4 1025 aaKnown RBP17.19■□□□□ 0.34
SSR4-206ENST00000460616 ARMT1Q9H993 441 aa17.19■□□□□ 0.34
SSR4-206ENST00000460616 EHD2Q9NZN4 543 aa17.19■□□□□ 0.34
SSR4-206ENST00000460616 ZNF652Q9Y2D9 606 aa17.19■□□□□ 0.34
SSR4-206ENST00000460616 V9GY48 417 aaPredicted RBP17.19■□□□□ 0.34
SSR4-206ENST00000460616 MYH3P11055 1940 aa17.18■□□□□ 0.34
SSR4-206ENST00000460616 GSG1L2A8MUP6 293 aa17.18■□□□□ 0.34
SSR4-206ENST00000460616 SCP2P22307 547 aa17.18■□□□□ 0.34
SSR4-206ENST00000460616 MDH1P40925 334 aaKnown RBP17.18■□□□□ 0.34
SSR4-206ENST00000460616 N4BP2L2Q92802 583 aaPredicted RBP17.18■□□□□ 0.34
SSR4-206ENST00000460616 UBAC1Q9BSL1 405 aa17.18■□□□□ 0.34
SSR4-206ENST00000460616 SH2D4AQ9H788 454 aa17.18■□□□□ 0.34
SSR4-206ENST00000460616 VEZTQ9HBM0 779 aa17.18■□□□□ 0.34
SSR4-206ENST00000460616 SLC40A1Q9NP59 571 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms