RNA–Protein interactions for RNA: ENST00000460485.1

ERCC3-205, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 3

Gene ERCC3, Length 815 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-205ENST00000460485 SERPINC1P01008 464 aa15.91■□□□□ 0.14
ERCC3-205ENST00000460485 SFPQP23246 707 aaKnown RBP eCLIP15.91■□□□□ 0.14
ERCC3-205ENST00000460485 AMPD3Q01432 767 aa15.91■□□□□ 0.14
ERCC3-205ENST00000460485 NFIAQ12857 509 aa15.91■□□□□ 0.14
ERCC3-205ENST00000460485 CCDC96Q2M329 555 aa15.91■□□□□ 0.14
ERCC3-205ENST00000460485 CFAP100Q494V2 611 aa15.91■□□□□ 0.14
ERCC3-205ENST00000460485 PPP4R3AQ6IN85 833 aa15.91■□□□□ 0.14
ERCC3-205ENST00000460485 MOXD1Q6UVY6 613 aa15.91■□□□□ 0.14
ERCC3-205ENST00000460485 OGFOD1Q8N543 542 aa15.91■□□□□ 0.14
ERCC3-205ENST00000460485 IFNKQ9P0W0 207 aa15.91■□□□□ 0.14
ERCC3-205ENST00000460485 VIL1P09327 827 aaKnown RBP15.9■□□□□ 0.14
ERCC3-205ENST00000460485 PRR29P0C7W0 189 aa15.9■□□□□ 0.14
ERCC3-205ENST00000460485 ZNF18P17022 549 aa15.9■□□□□ 0.14
ERCC3-205ENST00000460485 FXR2P51116 673 aaKnown RBP eCLIP15.9■□□□□ 0.14
ERCC3-205ENST00000460485 UBASH3AP57075 661 aa15.9■□□□□ 0.14
ERCC3-205ENST00000460485 ICA1Q05084 483 aa15.9■□□□□ 0.14
ERCC3-205ENST00000460485 AP3B2Q13367 1082 aa15.9■□□□□ 0.14
ERCC3-205ENST00000460485 STIM1Q13586 685 aa15.9■□□□□ 0.14
ERCC3-205ENST00000460485 ABCB5Q2M3G0 1257 aa15.9■□□□□ 0.14
ERCC3-205ENST00000460485 DNTTIP2Q5QJE6 756 aaKnown RBP15.9■□□□□ 0.14
ERCC3-205ENST00000460485 SPATA1Q5VX52 437 aa15.9■□□□□ 0.14
ERCC3-205ENST00000460485 RRAGBQ5VZM2 374 aa15.9■□□□□ 0.14
ERCC3-205ENST00000460485 KRT26Q7Z3Y9 468 aa15.9■□□□□ 0.14
ERCC3-205ENST00000460485 ZSCAN29Q8IWY8 852 aaPredicted RBP15.9■□□□□ 0.14
ERCC3-205ENST00000460485 ADGRF4Q8IZF3 695 aa15.9■□□□□ 0.14
ERCC3-205ENST00000460485 ANKRD20A12PQ8NF67 263 aa15.9■□□□□ 0.14
ERCC3-205ENST00000460485 MXD3Q9BW11 206 aa15.9■□□□□ 0.14
ERCC3-205ENST00000460485 SH2D4AQ9H788 454 aa15.9■□□□□ 0.14
ERCC3-205ENST00000460485 DNAJC18Q9H819 358 aa15.9■□□□□ 0.14
ERCC3-205ENST00000460485 JMJD4Q9H9V9 463 aa15.9■□□□□ 0.14
ERCC3-205ENST00000460485 STK17AQ9UEE5 414 aa15.9■□□□□ 0.14
ERCC3-205ENST00000460485 STK24Q9Y6E0 443 aa15.9■□□□□ 0.14
ERCC3-205ENST00000460485 A0A087X0B3 334 aa15.89■□□□□ 0.13
ERCC3-205ENST00000460485 SPDYE2BA6NHP3 402 aa15.89■□□□□ 0.13
ERCC3-205ENST00000460485 WNT7AO00755 349 aa15.89■□□□□ 0.13
ERCC3-205ENST00000460485 CCNT1O60563 726 aaKnown RBP15.89■□□□□ 0.13
ERCC3-205ENST00000460485 RAD17O75943 681 aa15.89■□□□□ 0.13
ERCC3-205ENST00000460485 SLC10A3P09131 477 aa15.89■□□□□ 0.13
ERCC3-205ENST00000460485 SPDYE6P0CI01 402 aa15.89■□□□□ 0.13
ERCC3-205ENST00000460485 SLC1A4P43007 532 aa15.89■□□□□ 0.13
ERCC3-205ENST00000460485 PDIA5Q14554 519 aa15.89■□□□□ 0.13
ERCC3-205ENST00000460485 NOM1Q5C9Z4 860 aaKnown RBP15.89■□□□□ 0.13
ERCC3-205ENST00000460485 RBM26Q5T8P6 1007 aaKnown RBP15.89■□□□□ 0.13
ERCC3-205ENST00000460485 ZNF658Q5TYW1 1059 aaPredicted RBP15.89■□□□□ 0.13
ERCC3-205ENST00000460485 USP49Q70CQ1 688 aa15.89■□□□□ 0.13
ERCC3-205ENST00000460485 FAM83AQ86UY5 434 aa15.89■□□□□ 0.13
ERCC3-205ENST00000460485 FCHSD1Q86WN1 690 aa15.89■□□□□ 0.13
ERCC3-205ENST00000460485 VSTM4Q8IW00 320 aa15.89■□□□□ 0.13
ERCC3-205ENST00000460485 RASSF8Q8NHQ8 419 aa15.89■□□□□ 0.13
ERCC3-205ENST00000460485 TBCKQ8TEA7 893 aa15.89■□□□□ 0.13
ERCC3-205ENST00000460485 FAM151AQ8WW52 585 aa15.89■□□□□ 0.13
ERCC3-205ENST00000460485 CALML4Q96GE6 196 aa15.89■□□□□ 0.13
ERCC3-205ENST00000460485 HSD3B7Q9H2F3 369 aa15.89■□□□□ 0.13
ERCC3-205ENST00000460485 ARHGEF10LQ9HCE6 1279 aa15.89■□□□□ 0.13
ERCC3-205ENST00000460485 MTMR7Q9Y216 660 aa15.89■□□□□ 0.13
ERCC3-205ENST00000460485 NFE2L3Q9Y4A8 694 aa15.89■□□□□ 0.13
ERCC3-205ENST00000460485 ATAD5Q96QE3 1844 aa15.89■□□□□ 0.13
ERCC3-205ENST00000460485 LOXHD1Q8IVV2 1947 aa15.88■□□□□ 0.13
ERCC3-205ENST00000460485 TBC1D12O60347 775 aa15.88■□□□□ 0.13
ERCC3-205ENST00000460485 BMP6P22004 513 aa15.88■□□□□ 0.13
ERCC3-205ENST00000460485 CLK2P49760 499 aaKnown RBP15.88■□□□□ 0.13
ERCC3-205ENST00000460485 CUL4BQ13620 913 aa15.88■□□□□ 0.13
ERCC3-205ENST00000460485 FILIP1LQ4L180 1135 aa15.88■□□□□ 0.13
ERCC3-205ENST00000460485 HABP4Q5JVS0 413 aaKnown RBP15.88■□□□□ 0.13
ERCC3-205ENST00000460485 SLFN13Q68D06 897 aa15.88■□□□□ 0.13
ERCC3-205ENST00000460485 MICALL2Q8IY33 904 aa15.88■□□□□ 0.13
ERCC3-205ENST00000460485 IGSF22Q8N9C0 903 aa15.88■□□□□ 0.13
ERCC3-205ENST00000460485 RASGRP4Q8TDF6 673 aa15.88■□□□□ 0.13
ERCC3-205ENST00000460485 NOC3LQ8WTT2 800 aaKnown RBP15.88■□□□□ 0.13
ERCC3-205ENST00000460485 CACTINQ8WUQ7 758 aaKnown RBP15.88■□□□□ 0.13
ERCC3-205ENST00000460485 GMLQ99445 158 aa15.88■□□□□ 0.13
ERCC3-205ENST00000460485 GINM1Q9NU53 330 aa15.88■□□□□ 0.13
ERCC3-205ENST00000460485 RWDD2AQ9UIY3 292 aa15.88■□□□□ 0.13
ERCC3-205ENST00000460485 FRMPD2Q68DX3 1309 aaPredicted RBP15.88■□□□□ 0.13
ERCC3-205ENST00000460485 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.87■□□□□ 0.13
ERCC3-205ENST00000460485 DDTLA6NHG4 134 aaPredicted RBP15.87■□□□□ 0.13
ERCC3-205ENST00000460485 FOSP01100 380 aaPredicted RBP15.87■□□□□ 0.13
ERCC3-205ENST00000460485 EEF2P13639 858 aaKnown RBP15.87■□□□□ 0.13
ERCC3-205ENST00000460485 CDK11BP21127 795 aaKnown RBP15.87■□□□□ 0.13
ERCC3-205ENST00000460485 AFMP43652 599 aa15.87■□□□□ 0.13
ERCC3-205ENST00000460485 DLGAP5Q15398 846 aa15.87■□□□□ 0.13
ERCC3-205ENST00000460485 IL17AQ16552 155 aa15.87■□□□□ 0.13
ERCC3-205ENST00000460485 CALCRLQ16602 461 aa15.87■□□□□ 0.13
ERCC3-205ENST00000460485 LETM2Q2VYF4 491 aa15.87■□□□□ 0.13
ERCC3-205ENST00000460485 CCDC144BQ3MJ40 725 aa15.87■□□□□ 0.13
ERCC3-205ENST00000460485 SPDYE2Q495Y8 402 aa15.87■□□□□ 0.13
ERCC3-205ENST00000460485 COBLL1Q53SF7 1204 aa15.87■□□□□ 0.13
ERCC3-205ENST00000460485 BTNL9Q6UXG8 535 aa15.87■□□□□ 0.13
ERCC3-205ENST00000460485 TMC6Q7Z403 805 aa15.87■□□□□ 0.13
ERCC3-205ENST00000460485 KCTD17Q8N5Z5 321 aa15.87■□□□□ 0.13
ERCC3-205ENST00000460485 DCPSQ96C86 337 aaKnown RBP15.87■□□□□ 0.13
ERCC3-205ENST00000460485 ZNF830Q96NB3 372 aaPredicted RBP15.87■□□□□ 0.13
ERCC3-205ENST00000460485 GPCPD1Q9NPB8 672 aa15.87■□□□□ 0.13
ERCC3-205ENST00000460485 KBTBD4Q9NVX7 518 aa15.87■□□□□ 0.13
ERCC3-205ENST00000460485 PYCARDQ9ULZ3 195 aa15.87■□□□□ 0.13
ERCC3-205ENST00000460485 KDM3AQ9Y4C1 1321 aa15.87■□□□□ 0.13
ERCC3-205ENST00000460485 A0A087WWV3 80 aa15.86■□□□□ 0.13
ERCC3-205ENST00000460485 YDJCA8MPS7 323 aa15.86■□□□□ 0.13
ERCC3-205ENST00000460485 RPN1P04843 607 aaKnown RBP15.86■□□□□ 0.13
ERCC3-205ENST00000460485 SKILP12757 684 aa15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms