RNA–Protein interactions for RNA: ENST00000460235.1

HDAC4-206, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 343 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-206ENST00000460235 POTEB2H3BUK9 544 aa14.13□□□□□ -0.15
HDAC4-206ENST00000460235 GPR25O00155 361 aa14.13□□□□□ -0.15
HDAC4-206ENST00000460235 TNPO2O14787 897 aaKnown RBP14.13□□□□□ -0.15
HDAC4-206ENST00000460235 STX6O43752 255 aa14.13□□□□□ -0.15
HDAC4-206ENST00000460235 PPP1R11O60927 126 aaPredicted RBP14.13□□□□□ -0.15
HDAC4-206ENST00000460235 PPFIA3O75145 1194 aa14.13□□□□□ -0.15
HDAC4-206ENST00000460235 PRMT2P55345 433 aa14.13□□□□□ -0.15
HDAC4-206ENST00000460235 LACTBP83111 547 aaPredicted RBP14.13□□□□□ -0.15
HDAC4-206ENST00000460235 GHRHRQ02643 423 aa14.13□□□□□ -0.15
HDAC4-206ENST00000460235 Q3C1V9 767 aa14.13□□□□□ -0.15
HDAC4-206ENST00000460235 MCTP1Q6DN14 999 aa14.13□□□□□ -0.15
HDAC4-206ENST00000460235 BRAPQ7Z569 592 aa14.13□□□□□ -0.15
HDAC4-206ENST00000460235 DPP9Q86TI2 863 aa14.13□□□□□ -0.15
HDAC4-206ENST00000460235 TRMT44Q8IYL2 757 aaKnown RBP14.13□□□□□ -0.15
HDAC4-206ENST00000460235 SPRYD3Q8NCJ5 442 aa14.13□□□□□ -0.15
HDAC4-206ENST00000460235 DNERQ8NFT8 737 aa14.13□□□□□ -0.15
HDAC4-206ENST00000460235 NUDT12Q9BQG2 462 aa14.13□□□□□ -0.15
HDAC4-206ENST00000460235 DIS3Q9Y2L1 958 aaKnown RBP14.13□□□□□ -0.15
HDAC4-206ENST00000460235 VPS37CA5D8V6 355 aaPredicted RBP14.12□□□□□ -0.15
HDAC4-206ENST00000460235 SYT1P21579 422 aa14.12□□□□□ -0.15
HDAC4-206ENST00000460235 PTPREP23469 700 aa14.12□□□□□ -0.15
HDAC4-206ENST00000460235 HSD17B4P51659 736 aa14.12□□□□□ -0.15
HDAC4-206ENST00000460235 XRRA1Q6P2D8 792 aa14.12□□□□□ -0.15
HDAC4-206ENST00000460235 GPR142Q7Z601 462 aa14.12□□□□□ -0.15
HDAC4-206ENST00000460235 JMYQ8N9B5 988 aa14.12□□□□□ -0.15
HDAC4-206ENST00000460235 NSUN6Q8TEA1 469 aaKnown RBP14.12□□□□□ -0.15
HDAC4-206ENST00000460235 CLEC4DQ8WXI8 215 aa14.12□□□□□ -0.15
HDAC4-206ENST00000460235 NOL7Q9UMY1 257 aaKnown RBP14.12□□□□□ -0.15
HDAC4-206ENST00000460235 MYH6P13533 1939 aa14.11□□□□□ -0.15
HDAC4-206ENST00000460235 RLFQ13129 1914 aa14.11□□□□□ -0.15
HDAC4-206ENST00000460235 ASB14A6NK59 587 aa14.11□□□□□ -0.15
HDAC4-206ENST00000460235 RGS2P41220 211 aa14.11□□□□□ -0.15
HDAC4-206ENST00000460235 PSMC4P43686 418 aa14.11□□□□□ -0.15
HDAC4-206ENST00000460235 RPS6P62753 249 aaKnown RBP14.11□□□□□ -0.15
HDAC4-206ENST00000460235 DIS3L2Q8IYB7 885 aaKnown RBP14.11□□□□□ -0.15
HDAC4-206ENST00000460235 MSL3Q8N5Y2 521 aaKnown RBP14.11□□□□□ -0.15
HDAC4-206ENST00000460235 IWS1Q96ST2 819 aa14.11□□□□□ -0.15
HDAC4-206ENST00000460235 EFCC1Q9HA90 598 aa14.11□□□□□ -0.15
HDAC4-206ENST00000460235 A1CFQ9NQ94 594 aaKnown RBP14.11□□□□□ -0.15
HDAC4-206ENST00000460235 CYP39A1Q9NYL5 469 aa14.11□□□□□ -0.15
HDAC4-206ENST00000460235 RIPK3Q9Y572 518 aa14.11□□□□□ -0.15
HDAC4-206ENST00000460235 PARP14Q460N5 1801 aa14.11□□□□□ -0.15
HDAC4-206ENST00000460235 A0A0G2JMZ2 1700 aa14.1□□□□□ -0.15
HDAC4-206ENST00000460235 NFIBO00712 420 aa14.1□□□□□ -0.15
HDAC4-206ENST00000460235 STAM2O75886 525 aa14.1□□□□□ -0.15
HDAC4-206ENST00000460235 TRAPPC10P48553 1259 aa14.1□□□□□ -0.15
HDAC4-206ENST00000460235 BAATQ14032 418 aaPredicted RBP14.1□□□□□ -0.15
HDAC4-206ENST00000460235 NONOQ15233 471 aaKnown RBP eCLIP14.1□□□□□ -0.15
HDAC4-206ENST00000460235 MUM1L1Q5H9M0 696 aa14.1□□□□□ -0.15
HDAC4-206ENST00000460235 ARHGEF16Q5VV41 709 aa14.1□□□□□ -0.15
HDAC4-206ENST00000460235 ZNF467Q7Z7K2 595 aaPredicted RBP14.1□□□□□ -0.15
HDAC4-206ENST00000460235 AIFM3Q96NN9 605 aa14.1□□□□□ -0.15
HDAC4-206ENST00000460235 PORCNQ9H237 461 aa14.1□□□□□ -0.15
HDAC4-206ENST00000460235 KCNJ14Q9UNX9 436 aa14.1□□□□□ -0.15
HDAC4-206ENST00000460235 U2AF2P26368 475 aaKnown RBP eCLIP14.09□□□□□ -0.15
HDAC4-206ENST00000460235 ADORA2AP29274 412 aa14.09□□□□□ -0.15
HDAC4-206ENST00000460235 CTCFP49711 727 aaPredicted RBP14.09□□□□□ -0.15
HDAC4-206ENST00000460235 USP11P51784 963 aa14.09□□□□□ -0.15
HDAC4-206ENST00000460235 FOSBP53539 338 aa14.09□□□□□ -0.15
HDAC4-206ENST00000460235 GUCY1B3Q02153 619 aa14.09□□□□□ -0.15
HDAC4-206ENST00000460235 MAP2K5Q13163 448 aa14.09□□□□□ -0.15
HDAC4-206ENST00000460235 GRB14Q14449 540 aa14.09□□□□□ -0.15
HDAC4-206ENST00000460235 ATL3Q6DD88 541 aa14.09□□□□□ -0.15
HDAC4-206ENST00000460235 FCHSD1Q86WN1 690 aa14.09□□□□□ -0.15
HDAC4-206ENST00000460235 NOSTRINQ8IVI9 506 aa14.09□□□□□ -0.15
HDAC4-206ENST00000460235 SYTL5Q8TDW5 730 aaPredicted RBP14.09□□□□□ -0.15
HDAC4-206ENST00000460235 RMDN3Q96TC7 470 aa14.09□□□□□ -0.15
HDAC4-206ENST00000460235 CHMP5Q9NZZ3 219 aa14.09□□□□□ -0.15
HDAC4-206ENST00000460235 BIN2Q9UBW5 565 aaPredicted RBP14.09□□□□□ -0.15
HDAC4-206ENST00000460235 PCDHA6Q9UN73 950 aa14.09□□□□□ -0.15
HDAC4-206ENST00000460235 PCDHA8Q9Y5H6 950 aa14.09□□□□□ -0.15
HDAC4-206ENST00000460235 MEIS2O14770 477 aa14.08□□□□□ -0.16
HDAC4-206ENST00000460235 BMP15O95972 392 aa14.08□□□□□ -0.16
HDAC4-206ENST00000460235 ZSCAN22P10073 491 aaPredicted RBP14.08□□□□□ -0.16
HDAC4-206ENST00000460235 XRCC5P13010 732 aaKnown RBP14.08□□□□□ -0.16
HDAC4-206ENST00000460235 GCFC2P16383 781 aaKnown RBP14.08□□□□□ -0.16
HDAC4-206ENST00000460235 ZNF76P36508 570 aa14.08□□□□□ -0.16
HDAC4-206ENST00000460235 ORC2Q13416 577 aaPredicted RBP14.08□□□□□ -0.16
HDAC4-206ENST00000460235 RILPL1Q5EBL4 403 aa14.08□□□□□ -0.16
HDAC4-206ENST00000460235 JAKMIP3Q5VZ66 844 aa14.08□□□□□ -0.16
HDAC4-206ENST00000460235 TYW1BQ6NUM6 668 aa14.08□□□□□ -0.16
HDAC4-206ENST00000460235 USP17L6PQ6QN14 398 aa14.08□□□□□ -0.16
HDAC4-206ENST00000460235 POTEEQ6S8J3 1075 aa14.08□□□□□ -0.16
HDAC4-206ENST00000460235 ZNF396Q96N95 335 aaPredicted RBP14.08□□□□□ -0.16
HDAC4-206ENST00000460235 DNAJC25-GNG10A0A024R161 153 aa14.07□□□□□ -0.16
HDAC4-206ENST00000460235 BTBD18B2RXH4 712 aa14.07□□□□□ -0.16
HDAC4-206ENST00000460235 HOXC6P09630 235 aa14.07□□□□□ -0.16
HDAC4-206ENST00000460235 CCND2P30279 289 aa14.07□□□□□ -0.16
HDAC4-206ENST00000460235 HOXA13P31271 388 aaPredicted RBP14.07□□□□□ -0.16
HDAC4-206ENST00000460235 CLK2P49760 499 aaKnown RBP14.07□□□□□ -0.16
HDAC4-206ENST00000460235 PDE4DQ08499 809 aa14.07□□□□□ -0.16
HDAC4-206ENST00000460235 STXBP2Q15833 593 aa14.07□□□□□ -0.16
HDAC4-206ENST00000460235 GNPTABQ3T906 1256 aa14.07□□□□□ -0.16
HDAC4-206ENST00000460235 FAM133AQ8N9E0 248 aa14.07□□□□□ -0.16
HDAC4-206ENST00000460235 ZNF296Q8WUU4 475 aaPredicted RBP14.07□□□□□ -0.16
HDAC4-206ENST00000460235 CDHR1Q96JP9 859 aa14.07□□□□□ -0.16
HDAC4-206ENST00000460235 APBA2Q99767 749 aa14.07□□□□□ -0.16
HDAC4-206ENST00000460235 ANO3Q9BYT9 981 aa14.07□□□□□ -0.16
HDAC4-206ENST00000460235 CEP131Q9UPN4 1083 aa14.07□□□□□ -0.16
HDAC4-206ENST00000460235 MTMR6Q9Y217 621 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms