RNA–Protein interactions for RNA: ENST00000459982.5

IRF1-206, Transcript of interferon regulatory factor 1, humanhuman

TSL 3

Gene IRF1, Length 1,231 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF1-206ENST00000459982 RPTORQ8N122 1335 aa19.2■□□□□ 0.66
IRF1-206ENST00000459982 BRCA2P51587 3418 aa19.19■□□□□ 0.66
IRF1-206ENST00000459982 CFBP00751 764 aa19.19■□□□□ 0.66
IRF1-206ENST00000459982 PRAMEF19Q5SWL8 479 aa19.19■□□□□ 0.66
IRF1-206ENST00000459982 MAMDC4Q6UXC1 1216 aa19.19■□□□□ 0.66
IRF1-206ENST00000459982 PHKBQ93100 1093 aa19.19■□□□□ 0.66
IRF1-206ENST00000459982 TMEM106CQ9BVX2 250 aa19.19■□□□□ 0.66
IRF1-206ENST00000459982 RNF208Q9H0X6 261 aa19.19■□□□□ 0.66
IRF1-206ENST00000459982 SLKQ9H2G2 1235 aaPredicted RBP19.19■□□□□ 0.66
IRF1-206ENST00000459982 HMX1Q9NP08 348 aaPredicted RBP19.19■□□□□ 0.66
IRF1-206ENST00000459982 PRPF3O43395 683 aaKnown RBP19.18■□□□□ 0.66
IRF1-206ENST00000459982 PFKFB2O60825 505 aa19.18■□□□□ 0.66
IRF1-206ENST00000459982 PPFIA3O75145 1194 aa19.18■□□□□ 0.66
IRF1-206ENST00000459982 IFNAR1P17181 557 aa19.18■□□□□ 0.66
IRF1-206ENST00000459982 SCRN1Q12765 414 aa19.18■□□□□ 0.66
IRF1-206ENST00000459982 RABEP1Q15276 862 aa19.18■□□□□ 0.66
IRF1-206ENST00000459982 ME3Q16798 604 aa19.18■□□□□ 0.66
IRF1-206ENST00000459982 TRPV1Q8NER1 839 aa19.18■□□□□ 0.66
IRF1-206ENST00000459982 SYTL5Q8TDW5 730 aaPredicted RBP19.18■□□□□ 0.66
IRF1-206ENST00000459982 ASTN1O14525 1302 aa19.18■□□□□ 0.66
IRF1-206ENST00000459982 CPLX1O14810 134 aa19.17■□□□□ 0.66
IRF1-206ENST00000459982 SNAI1O95863 264 aaPredicted RBP19.17■□□□□ 0.66
IRF1-206ENST00000459982 CCND3P30281 292 aaPredicted RBP19.17■□□□□ 0.66
IRF1-206ENST00000459982 HSD17B4P51659 736 aa19.17■□□□□ 0.66
IRF1-206ENST00000459982 GHRHRQ02643 423 aa19.17■□□□□ 0.66
IRF1-206ENST00000459982 WWC2Q6AWC2 1192 aa19.17■□□□□ 0.66
IRF1-206ENST00000459982 HEATR3Q7Z4Q2 680 aa19.17■□□□□ 0.66
IRF1-206ENST00000459982 SAMD3Q8N6K7 520 aa19.17■□□□□ 0.66
IRF1-206ENST00000459982 GPKOWQ92917 476 aaPredicted RBP eCLIP19.17■□□□□ 0.66
IRF1-206ENST00000459982 TAAR1Q96RJ0 339 aa19.17■□□□□ 0.66
IRF1-206ENST00000459982 MAP3K20Q9NYL2 800 aaKnown RBP19.17■□□□□ 0.66
IRF1-206ENST00000459982 COL20A1Q9P218 1284 aa19.17■□□□□ 0.66
IRF1-206ENST00000459982 ADD3Q9UEY8 706 aaKnown RBP19.17■□□□□ 0.66
IRF1-206ENST00000459982 SYNGAP1Q96PV0 1343 aa19.17■□□□□ 0.66
IRF1-206ENST00000459982 LCTP09848 1927 aa19.16■□□□□ 0.66
IRF1-206ENST00000459982 ASB14A6NK59 587 aa19.16■□□□□ 0.66
IRF1-206ENST00000459982 GCOM1H8Y6P7 765 aaPredicted RBP19.16■□□□□ 0.66
IRF1-206ENST00000459982 LARGE1O95461 756 aa19.16■□□□□ 0.66
IRF1-206ENST00000459982 POLR2MP0CAP2 368 aa19.16■□□□□ 0.66
IRF1-206ENST00000459982 CYBAP13498 195 aa19.16■□□□□ 0.66
IRF1-206ENST00000459982 AKAP17AQ02040 695 aaKnown RBP19.16■□□□□ 0.66
IRF1-206ENST00000459982 PKN1Q16512 942 aa19.16■□□□□ 0.66
IRF1-206ENST00000459982 PFKFB3Q16875 520 aaPredicted RBP19.16■□□□□ 0.66
IRF1-206ENST00000459982 ARMCX2Q7L311 632 aa19.16■□□□□ 0.66
IRF1-206ENST00000459982 DNERQ8NFT8 737 aa19.16■□□□□ 0.66
IRF1-206ENST00000459982 SLC26A6Q9BXS9 759 aa19.16■□□□□ 0.66
IRF1-206ENST00000459982 RNF26Q9BY78 433 aaPredicted RBP19.16■□□□□ 0.66
IRF1-206ENST00000459982 XRN2Q9H0D6 950 aaKnown RBP eCLIP19.16■□□□□ 0.66
IRF1-206ENST00000459982 PAK6Q9NQU5 681 aaPredicted RBP19.16■□□□□ 0.66
IRF1-206ENST00000459982 CDKN2AIPQ9NXV6 580 aaPredicted RBP19.16■□□□□ 0.66
IRF1-206ENST00000459982 LIMCH1Q9UPQ0 1083 aa19.16■□□□□ 0.66
IRF1-206ENST00000459982 DDX49Q9Y6V7 483 aaKnown RBP19.16■□□□□ 0.66
IRF1-206ENST00000459982 GJB1P08034 283 aa19.15■□□□□ 0.66
IRF1-206ENST00000459982 CNGA1P29973 690 aa19.15■□□□□ 0.66
IRF1-206ENST00000459982 HOXA13P31271 388 aaPredicted RBP19.15■□□□□ 0.66
IRF1-206ENST00000459982 ALDH5A1P51649 535 aaPredicted RBP19.15■□□□□ 0.66
IRF1-206ENST00000459982 SSRP1Q08945 709 aaKnown RBP19.15■□□□□ 0.66
IRF1-206ENST00000459982 CPLX2Q6PUV4 134 aaKnown RBP19.15■□□□□ 0.66
IRF1-206ENST00000459982 NECAB1Q8N987 351 aa19.15■□□□□ 0.66
IRF1-206ENST00000459982 RBM27Q9P2N5 1060 aaKnown RBP19.15■□□□□ 0.66
IRF1-206ENST00000459982 NRBP1Q9UHY1 535 aa19.15■□□□□ 0.66
IRF1-206ENST00000459982 POTEFA5A3E0 1075 aa19.14■□□□□ 0.65
IRF1-206ENST00000459982 STXBP3O00186 592 aa19.14■□□□□ 0.65
IRF1-206ENST00000459982 ZNF865P0CJ78 1059 aaPredicted RBP19.14■□□□□ 0.65
IRF1-206ENST00000459982 SCG2P13521 617 aa19.14■□□□□ 0.65
IRF1-206ENST00000459982 SOX10P56693 466 aa19.14■□□□□ 0.65
IRF1-206ENST00000459982 TYW1BQ6NUM6 668 aa19.14■□□□□ 0.65
IRF1-206ENST00000459982 MORC4Q8TE76 937 aa19.14■□□□□ 0.65
IRF1-206ENST00000459982 DEFB118Q96PH6 123 aa19.14■□□□□ 0.65
IRF1-206ENST00000459982 RMDN3Q96TC7 470 aa19.14■□□□□ 0.65
IRF1-206ENST00000459982 PSTPIP2Q9H939 334 aa19.14■□□□□ 0.65
IRF1-206ENST00000459982 BARHL2Q9NY43 387 aa19.14■□□□□ 0.65
IRF1-206ENST00000459982 CNPY2Q9Y2B0 182 aa19.14■□□□□ 0.65
IRF1-206ENST00000459982 LOC102724159A0A0B4J2E5 919 aa19.13■□□□□ 0.65
IRF1-206ENST00000459982 hCG_1984214I3L0E3 225 aa19.13■□□□□ 0.65
IRF1-206ENST00000459982 MEIS2O14770 477 aa19.13■□□□□ 0.65
IRF1-206ENST00000459982 CAPN15O75808 1086 aa19.13■□□□□ 0.65
IRF1-206ENST00000459982 SGPL1O95470 568 aa19.13■□□□□ 0.65
IRF1-206ENST00000459982 NAPAP54920 295 aa19.13■□□□□ 0.65
IRF1-206ENST00000459982 ACVR2BQ13705 512 aa19.13■□□□□ 0.65
IRF1-206ENST00000459982 PWP2Q15269 919 aaKnown RBP19.13■□□□□ 0.65
IRF1-206ENST00000459982 USP17L6PQ6QN14 398 aa19.13■□□□□ 0.65
IRF1-206ENST00000459982 TRIM22Q8IYM9 498 aa19.13■□□□□ 0.65
IRF1-206ENST00000459982 ZNF713Q8N859 430 aaPredicted RBP19.13■□□□□ 0.65
IRF1-206ENST00000459982 IL27Q8NEV9 243 aa19.13■□□□□ 0.65
IRF1-206ENST00000459982 NSUN6Q8TEA1 469 aaKnown RBP19.13■□□□□ 0.65
IRF1-206ENST00000459982 GTF3C6Q969F1 213 aa19.13■□□□□ 0.65
IRF1-206ENST00000459982 KATNBL1Q9H079 304 aa19.13■□□□□ 0.65
IRF1-206ENST00000459982 ABHD16BQ9H3Z7 469 aa19.13■□□□□ 0.65
IRF1-206ENST00000459982 RBBP6Q7Z6E9 1792 aaKnown RBP19.13■□□□□ 0.65
IRF1-206ENST00000459982 MCM3APO60318 1980 aa19.12■□□□□ 0.65
IRF1-206ENST00000459982 PIK3CDO00329 1044 aa19.12■□□□□ 0.65
IRF1-206ENST00000459982 CTDNEP1O95476 244 aa19.12■□□□□ 0.65
IRF1-206ENST00000459982 EN2P19622 333 aaPredicted RBP19.12■□□□□ 0.65
IRF1-206ENST00000459982 GJA8P48165 433 aa19.12■□□□□ 0.65
IRF1-206ENST00000459982 ARHGEF16Q5VV41 709 aa19.12■□□□□ 0.65
IRF1-206ENST00000459982 PPP1R18Q6NYC8 613 aa19.12■□□□□ 0.65
IRF1-206ENST00000459982 FCHSD1Q86WN1 690 aa19.12■□□□□ 0.65
IRF1-206ENST00000459982 U2AF1L4Q8WU68 220 aaKnown RBP19.12■□□□□ 0.65
IRF1-206ENST00000459982 CUL5Q93034 780 aa19.12■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms