RNA–Protein interactions for RNA: ENST00000459799.1

SCNM1-203, Transcript of sodium channel modifier 1, humanhuman

TSL 2

Gene SCNM1, Length 619 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNM1-203ENST00000459799 PABPC5Q96DU9 382 aaKnown RBP10.85□□□□□ -0.67
SCNM1-203ENST00000459799 MRPL38Q96DV4 380 aaKnown RBP10.85□□□□□ -0.67
SCNM1-203ENST00000459799 CCDC17Q96LX7 622 aa10.85□□□□□ -0.67
SCNM1-203ENST00000459799 RAD9AQ99638 391 aa10.85□□□□□ -0.67
SCNM1-203ENST00000459799 PRRX2Q99811 253 aa10.85□□□□□ -0.67
SCNM1-203ENST00000459799 UPF3BQ9BZI7 483 aaKnown RBP10.85□□□□□ -0.67
SCNM1-203ENST00000459799 API5Q9BZZ5 524 aaKnown RBP10.85□□□□□ -0.67
SCNM1-203ENST00000459799 KANSL2Q9H9L4 492 aa10.85□□□□□ -0.67
SCNM1-203ENST00000459799 SLC38A10Q9HBR0 1119 aa10.85□□□□□ -0.67
SCNM1-203ENST00000459799 RAVER2Q9HCJ3 691 aaKnown RBP10.85□□□□□ -0.67
SCNM1-203ENST00000459799 FBXO40Q9UH90 709 aa10.85□□□□□ -0.67
SCNM1-203ENST00000459799 FAM50BQ9Y247 325 aa10.85□□□□□ -0.67
SCNM1-203ENST00000459799 Q9Y3F1 56 aa10.85□□□□□ -0.67
SCNM1-203ENST00000459799 MYO7AQ13402 2215 aa10.84□□□□□ -0.67
SCNM1-203ENST00000459799 CYP2D7A0A087X1C5 515 aa10.84□□□□□ -0.67
SCNM1-203ENST00000459799 RBAK-RBAKDNI3L0D1 243 aa10.84□□□□□ -0.67
SCNM1-203ENST00000459799 CDK8P49336 464 aa10.84□□□□□ -0.67
SCNM1-203ENST00000459799 TIGD5Q53EQ6 642 aa10.84□□□□□ -0.67
SCNM1-203ENST00000459799 C16orf86Q6ZW13 317 aa10.84□□□□□ -0.67
SCNM1-203ENST00000459799 ERMP1Q7Z2K6 904 aa10.84□□□□□ -0.67
SCNM1-203ENST00000459799 PRPF38AQ8NAV1 312 aaKnown RBP10.84□□□□□ -0.67
SCNM1-203ENST00000459799 EDAQ92838 391 aa10.84□□□□□ -0.67
SCNM1-203ENST00000459799 C17orf80Q9BSJ5 609 aa10.84□□□□□ -0.67
SCNM1-203ENST00000459799 ZBED2Q9BTP6 218 aa10.84□□□□□ -0.67
SCNM1-203ENST00000459799 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.84□□□□□ -0.67
SCNM1-203ENST00000459799 A1CFQ9NQ94 594 aaKnown RBP10.84□□□□□ -0.67
SCNM1-203ENST00000459799 HOMER2Q9NSB8 354 aa10.84□□□□□ -0.67
SCNM1-203ENST00000459799 TMEM221A6NGB7 291 aa10.83□□□□□ -0.68
SCNM1-203ENST00000459799 ASB14A6NK59 587 aa10.83□□□□□ -0.68
SCNM1-203ENST00000459799 M0R296 226 aa10.83□□□□□ -0.68
SCNM1-203ENST00000459799 NDUFB10O96000 172 aa10.83□□□□□ -0.68
SCNM1-203ENST00000459799 PDE6AP16499 860 aa10.83□□□□□ -0.68
SCNM1-203ENST00000459799 OAZ1P54368 228 aa10.83□□□□□ -0.68
SCNM1-203ENST00000459799 SMAD2Q15796 467 aaKnown RBP10.83□□□□□ -0.68
SCNM1-203ENST00000459799 LRRFIP1Q32MZ4 808 aaKnown RBP10.83□□□□□ -0.68
SCNM1-203ENST00000459799 EEPD1Q7L9B9 569 aa10.83□□□□□ -0.68
SCNM1-203ENST00000459799 RNF135Q8IUD6 432 aa10.83□□□□□ -0.68
SCNM1-203ENST00000459799 RETREG2Q8NC44 543 aa10.83□□□□□ -0.68
SCNM1-203ENST00000459799 FBXO22Q8NEZ5 403 aa10.83□□□□□ -0.68
SCNM1-203ENST00000459799 CTAGE1Q96RT6 745 aa10.83□□□□□ -0.68
SCNM1-203ENST00000459799 POLR3EQ9NVU0 708 aa10.83□□□□□ -0.68
SCNM1-203ENST00000459799 MYH7P12883 1935 aa10.83□□□□□ -0.68
SCNM1-203ENST00000459799 TCRBV5S4A2TA0A5A2 114 aa10.82□□□□□ -0.68
SCNM1-203ENST00000459799 E9PSI1 815 aa10.82□□□□□ -0.68
SCNM1-203ENST00000459799 GALR2O43603 387 aaPredicted RBP10.82□□□□□ -0.68
SCNM1-203ENST00000459799 ZBED4O75132 1171 aa10.82□□□□□ -0.68
SCNM1-203ENST00000459799 LTBRP36941 435 aa10.82□□□□□ -0.68
SCNM1-203ENST00000459799 BFSP2Q13515 415 aa10.82□□□□□ -0.68
SCNM1-203ENST00000459799 PKN1Q16512 942 aa10.82□□□□□ -0.68
SCNM1-203ENST00000459799 NBPF20Q3BBV1 942 aa10.82□□□□□ -0.68
SCNM1-203ENST00000459799 DUSP28Q4G0W2 176 aa10.82□□□□□ -0.68
SCNM1-203ENST00000459799 TCEAL5Q5H9L2 206 aa10.82□□□□□ -0.68
SCNM1-203ENST00000459799 FAM47CQ5HY64 1035 aa10.82□□□□□ -0.68
SCNM1-203ENST00000459799 IQSEC1Q6DN90 963 aa10.82□□□□□ -0.68
SCNM1-203ENST00000459799 NFRKBQ6P4R8 1299 aa10.82□□□□□ -0.68
SCNM1-203ENST00000459799 CNKSR3Q6P9H4 555 aa10.82□□□□□ -0.68
SCNM1-203ENST00000459799 TRIM67Q6ZTA4 783 aa10.82□□□□□ -0.68
SCNM1-203ENST00000459799 BANK1Q8NDB2 785 aa10.82□□□□□ -0.68
SCNM1-203ENST00000459799 KIFC2Q96AC6 838 aa10.82□□□□□ -0.68
SCNM1-203ENST00000459799 PBXIP1Q96AQ6 731 aa10.82□□□□□ -0.68
SCNM1-203ENST00000459799 EAF2Q96CJ1 260 aaPredicted RBP10.82□□□□□ -0.68
SCNM1-203ENST00000459799 POP1Q99575 1024 aaKnown RBP10.82□□□□□ -0.68
SCNM1-203ENST00000459799 CCDC8Q9H0W5 538 aaPredicted RBP10.82□□□□□ -0.68
SCNM1-203ENST00000459799 ACAD9Q9H845 621 aa10.82□□□□□ -0.68
SCNM1-203ENST00000459799 ZNF532Q9HCE3 1301 aa10.82□□□□□ -0.68
SCNM1-203ENST00000459799 F5H6K3 240 aa10.81□□□□□ -0.68
SCNM1-203ENST00000459799 PRKAB2O43741 272 aa10.81□□□□□ -0.68
SCNM1-203ENST00000459799 CXCL10P02778 98 aa10.81□□□□□ -0.68
SCNM1-203ENST00000459799 GNAI2P04899 355 aa10.81□□□□□ -0.68
SCNM1-203ENST00000459799 MYL3P08590 195 aa10.81□□□□□ -0.68
SCNM1-203ENST00000459799 VCPP55072 806 aaKnown RBP10.81□□□□□ -0.68
SCNM1-203ENST00000459799 KLRC3Q07444 240 aa10.81□□□□□ -0.68
SCNM1-203ENST00000459799 SLC9C2Q5TAH2 1124 aa10.81□□□□□ -0.68
SCNM1-203ENST00000459799 C12orf60Q5U649 245 aa10.81□□□□□ -0.68
SCNM1-203ENST00000459799 POTEGQ6S5H5 508 aa10.81□□□□□ -0.68
SCNM1-203ENST00000459799 ASCL5Q7RTU5 278 aa10.81□□□□□ -0.68
SCNM1-203ENST00000459799 SUGP1Q8IWZ8 645 aaKnown RBP10.81□□□□□ -0.68
SCNM1-203ENST00000459799 FBXL6Q8N531 539 aa10.81□□□□□ -0.68
SCNM1-203ENST00000459799 MORC4Q8TE76 937 aa10.81□□□□□ -0.68
SCNM1-203ENST00000459799 AFAP1L1Q8TED9 768 aa10.81□□□□□ -0.68
SCNM1-203ENST00000459799 MTG1Q9BT17 334 aaPredicted RBP10.81□□□□□ -0.68
SCNM1-203ENST00000459799 ARMT1Q9H993 441 aa10.81□□□□□ -0.68
SCNM1-203ENST00000459799 VTA1Q9NP79 307 aa10.81□□□□□ -0.68
SCNM1-203ENST00000459799 CLDND1Q9NY35 253 aa10.81□□□□□ -0.68
SCNM1-203ENST00000459799 COG6Q9Y2V7 657 aa10.81□□□□□ -0.68
SCNM1-203ENST00000459799 NCOR2Q9Y618 2525 aa10.81□□□□□ -0.68
SCNM1-203ENST00000459799 USP17L12C9JPN9 530 aa10.8□□□□□ -0.68
SCNM1-203ENST00000459799 USP17L21D6R901 530 aa10.8□□□□□ -0.68
SCNM1-203ENST00000459799 PROB1E7EW31 1015 aa10.8□□□□□ -0.68
SCNM1-203ENST00000459799 MBTPS2O43462 519 aa10.8□□□□□ -0.68
SCNM1-203ENST00000459799 NBNO60934 754 aa10.8□□□□□ -0.68
SCNM1-203ENST00000459799 CPT1AP50416 773 aa10.8□□□□□ -0.68
SCNM1-203ENST00000459799 PTPN11Q06124 597 aaPredicted RBP10.8□□□□□ -0.68
SCNM1-203ENST00000459799 RBL2Q08999 1139 aa10.8□□□□□ -0.68
SCNM1-203ENST00000459799 SLFN5Q08AF3 891 aa10.8□□□□□ -0.68
SCNM1-203ENST00000459799 OS9Q13438 667 aaPredicted RBP10.8□□□□□ -0.68
SCNM1-203ENST00000459799 PTPROQ16827 1216 aa10.8□□□□□ -0.68
SCNM1-203ENST00000459799 EPC2Q52LR7 807 aa10.8□□□□□ -0.68
SCNM1-203ENST00000459799 FAM117BQ6P1L5 589 aa10.8□□□□□ -0.68
SCNM1-203ENST00000459799 EP400NLQ6ZTU2 488 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms