RNA–Protein interactions for RNA: ENST00000458304.2

SPARCL1-204, Transcript of SPARC like 1, humanhuman

TSL 4

Gene SPARCL1, Length 568 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARCL1-204ENST00000458304 PDE12Q6L8Q7 609 aaKnown RBP5.79□□□□□ -1.48
SPARCL1-204ENST00000458304 CNNM4Q6P4Q7 775 aa5.79□□□□□ -1.48
SPARCL1-204ENST00000458304 C6orf15Q6UXA7 325 aaPredicted RBP5.79□□□□□ -1.48
SPARCL1-204ENST00000458304 ZNF438Q7Z4V0 828 aa5.79□□□□□ -1.48
SPARCL1-204ENST00000458304 FAM35AQ86V20 835 aa5.79□□□□□ -1.48
SPARCL1-204ENST00000458304 FAM178BQ8IXR5 827 aa5.79□□□□□ -1.48
SPARCL1-204ENST00000458304 CMTR1Q8N1G2 835 aaKnown RBP5.79□□□□□ -1.48
SPARCL1-204ENST00000458304 PPM1KQ8N3J5 372 aa5.79□□□□□ -1.48
SPARCL1-204ENST00000458304 C19orf47Q8N9M1 422 aaKnown RBP5.79□□□□□ -1.48
SPARCL1-204ENST00000458304 LEO1Q8WVC0 666 aaPredicted RBP5.79□□□□□ -1.48
SPARCL1-204ENST00000458304 ATXN2LQ8WWM7 1075 aaKnown RBP5.79□□□□□ -1.48
SPARCL1-204ENST00000458304 TTC9Q92623 222 aa5.79□□□□□ -1.48
SPARCL1-204ENST00000458304 SECISBP2LQ93073 1101 aaKnown RBP5.79□□□□□ -1.48
SPARCL1-204ENST00000458304 GJA10Q969M2 543 aa5.79□□□□□ -1.48
SPARCL1-204ENST00000458304 TTC14Q96N46 770 aa5.79□□□□□ -1.48
SPARCL1-204ENST00000458304 LGR6Q9HBX8 967 aa5.79□□□□□ -1.48
SPARCL1-204ENST00000458304 INTS7Q9NVH2 962 aaKnown RBP5.79□□□□□ -1.48
SPARCL1-204ENST00000458304 GTF2IRD1Q9UHL9 959 aa5.79□□□□□ -1.48
SPARCL1-204ENST00000458304 TRHDEQ9UKU6 1024 aa5.79□□□□□ -1.48
SPARCL1-204ENST00000458304 ZNRF3Q9ULT6 936 aa5.79□□□□□ -1.48
SPARCL1-204ENST00000458304 NUB1Q9Y5A7 615 aa5.79□□□□□ -1.48
SPARCL1-204ENST00000458304 MORC2Q9Y6X9 1032 aaPredicted RBP5.79□□□□□ -1.48
SPARCL1-204ENST00000458304 ATP7BP35670 1465 aa5.78□□□□□ -1.48
SPARCL1-204ENST00000458304 ARHGAP23Q9P227 1491 aa5.78□□□□□ -1.48
SPARCL1-204ENST00000458304 USP32Q8NFA0 1604 aa5.78□□□□□ -1.48
SPARCL1-204ENST00000458304 GABRDO14764 452 aa5.78□□□□□ -1.48
SPARCL1-204ENST00000458304 TECPR2O15040 1411 aa5.78□□□□□ -1.48
SPARCL1-204ENST00000458304 BRINP1O60477 761 aa5.78□□□□□ -1.48
SPARCL1-204ENST00000458304 MMP20O60882 483 aa5.78□□□□□ -1.48
SPARCL1-204ENST00000458304 RGS9O75916 674 aaPredicted RBP5.78□□□□□ -1.48
SPARCL1-204ENST00000458304 PGRP06401 933 aa5.78□□□□□ -1.48
SPARCL1-204ENST00000458304 FURINP09958 794 aa5.78□□□□□ -1.48
SPARCL1-204ENST00000458304 GPSM2P81274 684 aa5.78□□□□□ -1.48
SPARCL1-204ENST00000458304 CHAF1AQ13111 956 aaPredicted RBP5.78□□□□□ -1.48
SPARCL1-204ENST00000458304 STK3Q13188 491 aa5.78□□□□□ -1.48
SPARCL1-204ENST00000458304 TRIM28Q13263 835 aaKnown RBP5.78□□□□□ -1.48
SPARCL1-204ENST00000458304 PTCH1Q13635 1447 aa5.78□□□□□ -1.48
SPARCL1-204ENST00000458304 STAT4Q14765 748 aa5.78□□□□□ -1.48
SPARCL1-204ENST00000458304 TOMM20Q15388 145 aa5.78□□□□□ -1.48
SPARCL1-204ENST00000458304 SAFBQ15424 915 aaKnown RBP eCLIP5.78□□□□□ -1.48
SPARCL1-204ENST00000458304 GRIK4Q16099 956 aa5.78□□□□□ -1.48
SPARCL1-204ENST00000458304 MINDY4Q4G0A6 757 aa5.78□□□□□ -1.48
SPARCL1-204ENST00000458304 TRAPPC3LQ5T215 181 aa5.78□□□□□ -1.48
SPARCL1-204ENST00000458304 SYDE2Q5VT97 1194 aa5.78□□□□□ -1.48
SPARCL1-204ENST00000458304 HGSNATQ68CP4 663 aa5.78□□□□□ -1.48
SPARCL1-204ENST00000458304 MRM1Q6IN84 353 aaKnown RBP5.78□□□□□ -1.48
SPARCL1-204ENST00000458304 C1orf228Q6PIY5 440 aa5.78□□□□□ -1.48
SPARCL1-204ENST00000458304 LHFPL2Q6ZUX7 228 aa5.78□□□□□ -1.48
SPARCL1-204ENST00000458304 LSRQ86X29 649 aaPredicted RBP5.78□□□□□ -1.48
SPARCL1-204ENST00000458304 SPATS2Q86XZ4 545 aaKnown RBP5.78□□□□□ -1.48
SPARCL1-204ENST00000458304 LRRC47Q8N1G4 583 aaKnown RBP5.78□□□□□ -1.48
SPARCL1-204ENST00000458304 RBBP8NLQ8NC74 664 aaPredicted RBP5.78□□□□□ -1.48
SPARCL1-204ENST00000458304 CDK19Q9BWU1 502 aa5.78□□□□□ -1.48
SPARCL1-204ENST00000458304 LRRC27Q9C0I9 530 aa5.78□□□□□ -1.48
SPARCL1-204ENST00000458304 CNNM2Q9H8M5 875 aa5.78□□□□□ -1.48
SPARCL1-204ENST00000458304 PGAP2Q9UHJ9 254 aa5.78□□□□□ -1.48
SPARCL1-204ENST00000458304 FNDC3AQ9Y2H6 1198 aaKnown RBP5.78□□□□□ -1.48
SPARCL1-204ENST00000458304 INSRP06213 1382 aa5.78□□□□□ -1.48
SPARCL1-204ENST00000458304 PARD3Q8TEW0 1356 aa5.78□□□□□ -1.48
SPARCL1-204ENST00000458304 NSD3Q9BZ95 1437 aa5.77□□□□□ -1.49
SPARCL1-204ENST00000458304 PRSS47A8MTI9 375 aa5.77□□□□□ -1.49
SPARCL1-204ENST00000458304 APAF1O14727 1248 aa5.77□□□□□ -1.49
SPARCL1-204ENST00000458304 TLR3O15455 904 aaKnown RBP5.77□□□□□ -1.49
SPARCL1-204ENST00000458304 FIBPO43427 364 aa5.77□□□□□ -1.49
SPARCL1-204ENST00000458304 DHX16O60231 1041 aaKnown RBP5.77□□□□□ -1.49
SPARCL1-204ENST00000458304 FBXO24O75426 580 aa5.77□□□□□ -1.49
SPARCL1-204ENST00000458304 RBP3P10745 1247 aa5.77□□□□□ -1.49
SPARCL1-204ENST00000458304 SELPP16109 830 aa5.77□□□□□ -1.49
SPARCL1-204ENST00000458304 SOX18P35713 384 aa5.77□□□□□ -1.49
SPARCL1-204ENST00000458304 CCNFP41002 786 aa5.77□□□□□ -1.49
SPARCL1-204ENST00000458304 GATA4P43694 442 aa5.77□□□□□ -1.49
SPARCL1-204ENST00000458304 RENBPP51606 427 aa5.77□□□□□ -1.49
SPARCL1-204ENST00000458304 FCGRTP55899 365 aa5.77□□□□□ -1.49
SPARCL1-204ENST00000458304 MLLT1Q03111 559 aaPredicted RBP5.77□□□□□ -1.49
SPARCL1-204ENST00000458304 PDE1CQ14123 709 aaPredicted RBP5.77□□□□□ -1.49
SPARCL1-204ENST00000458304 GBX1Q14549 363 aa5.77□□□□□ -1.49
SPARCL1-204ENST00000458304 DHCR24Q15392 516 aa5.77□□□□□ -1.49
SPARCL1-204ENST00000458304 CWF19L2Q2TBE0 894 aaKnown RBP5.77□□□□□ -1.49
SPARCL1-204ENST00000458304 JAKMIP3Q5VZ66 844 aa5.77□□□□□ -1.49
SPARCL1-204ENST00000458304 PPP4R3AQ6IN85 833 aa5.77□□□□□ -1.49
SPARCL1-204ENST00000458304 PDXDC1Q6P996 788 aa5.77□□□□□ -1.49
SPARCL1-204ENST00000458304 TPH2Q8IWU9 490 aa5.77□□□□□ -1.49
SPARCL1-204ENST00000458304 AHI1Q8N157 1196 aa5.77□□□□□ -1.49
SPARCL1-204ENST00000458304 REXO1Q8N1G1 1221 aaKnown RBP5.77□□□□□ -1.49
SPARCL1-204ENST00000458304 CLASRPQ8N2M8 674 aaKnown RBP5.77□□□□□ -1.49
SPARCL1-204ENST00000458304 GLIS3Q8NEA6 775 aa5.77□□□□□ -1.49
SPARCL1-204ENST00000458304 SLC7A3Q8WY07 619 aa5.77□□□□□ -1.49
SPARCL1-204ENST00000458304 TTC17Q96AE7 1141 aa5.77□□□□□ -1.49
SPARCL1-204ENST00000458304 PLD4Q96BZ4 506 aa5.77□□□□□ -1.49
SPARCL1-204ENST00000458304 TRIM8Q9BZR9 551 aa5.77□□□□□ -1.49
SPARCL1-204ENST00000458304 IP6K2Q9UHH9 426 aa5.77□□□□□ -1.49
SPARCL1-204ENST00000458304 RCAN3Q9UKA8 241 aa5.77□□□□□ -1.49
SPARCL1-204ENST00000458304 PTPRMP28827 1452 aa5.77□□□□□ -1.49
SPARCL1-204ENST00000458304 ZBED9Q6R2W3 1325 aa5.76□□□□□ -1.49
SPARCL1-204ENST00000458304 MYOM1P52179 1685 aa5.76□□□□□ -1.49
SPARCL1-204ENST00000458304 IQCA1LA6NCM1 817 aa5.76□□□□□ -1.49
SPARCL1-204ENST00000458304 FBXO21O94952 628 aa5.76□□□□□ -1.49
SPARCL1-204ENST00000458304 APBA3O96018 575 aa5.76□□□□□ -1.49
SPARCL1-204ENST00000458304 ELNP15502 786 aa5.76□□□□□ -1.49
SPARCL1-204ENST00000458304 ITGB7P26010 798 aa5.76□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms