RNA–Protein interactions for RNA: ENST00000457828.6

LSS-205, Transcript of lanosterol synthase, humanhuman

TSL 1 (best) BASIC

Gene LSS, Length 4,390 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSS-205ENST00000457828 BICDL2A1A5D9 508 aa18.11■□□□□ 0.49
LSS-205ENST00000457828 NDUFAB1O14561 156 aa18.11■□□□□ 0.49
LSS-205ENST00000457828 CDK8P49336 464 aa18.11■□□□□ 0.49
LSS-205ENST00000457828 TYW1BQ6NUM6 668 aa18.11■□□□□ 0.49
LSS-205ENST00000457828 MICALL2Q8IY33 904 aa18.11■□□□□ 0.49
LSS-205ENST00000457828 OTUD6BQ8N6M0 293 aa18.11■□□□□ 0.49
LSS-205ENST00000457828 CCDC113Q9H0I3 377 aa18.11■□□□□ 0.49
LSS-205ENST00000457828 HAUS4Q9H6D7 363 aa18.11■□□□□ 0.49
LSS-205ENST00000457828 CHMP2AO43633 222 aa18.11■□□□□ 0.49
LSS-205ENST00000457828 TTLL1O95922 423 aa18.11■□□□□ 0.49
LSS-205ENST00000457828 NCAPHQ15003 741 aa18.11■□□□□ 0.49
LSS-205ENST00000457828 STRIP1Q5VSL9 837 aa18.11■□□□□ 0.49
LSS-205ENST00000457828 TTC19Q6DKK2 380 aaPredicted RBP18.11■□□□□ 0.49
LSS-205ENST00000457828 MKRN1Q9UHC7 482 aaKnown RBP18.11■□□□□ 0.49
LSS-205ENST00000457828 RNF40O75150 1001 aa18.1■□□□□ 0.49
LSS-205ENST00000457828 LIFRP42702 1097 aa18.1■□□□□ 0.49
LSS-205ENST00000457828 IREB2P48200 963 aaKnown RBP18.1■□□□□ 0.49
LSS-205ENST00000457828 GRIN1Q05586 938 aa18.1■□□□□ 0.49
LSS-205ENST00000457828 PRPF4BQ13523 1007 aaKnown RBP18.1■□□□□ 0.49
LSS-205ENST00000457828 CFAP58Q5T655 872 aa18.1■□□□□ 0.49
LSS-205ENST00000457828 KRT26Q7Z3Y9 468 aa18.1■□□□□ 0.49
LSS-205ENST00000457828 REXO1L1PQ8IX06 675 aa18.1■□□□□ 0.49
LSS-205ENST00000457828 SLC44A5Q8NCS7 719 aa18.1■□□□□ 0.49
LSS-205ENST00000457828 SLC10A4Q96EP9 437 aa18.1■□□□□ 0.49
LSS-205ENST00000457828 PAGE5Q96GU1 130 aa18.1■□□□□ 0.49
LSS-205ENST00000457828 FMN2Q9NZ56 1722 aa18.1■□□□□ 0.49
LSS-205ENST00000457828 GH2P01242 217 aa18.1■□□□□ 0.49
LSS-205ENST00000457828 PABPC4Q13310 644 aaKnown RBP eCLIP18.1■□□□□ 0.49
LSS-205ENST00000457828 C8orf74Q6P047 294 aa18.1■□□□□ 0.49
LSS-205ENST00000457828 MICALCLQ6ZW33 695 aa18.1■□□□□ 0.49
LSS-205ENST00000457828 SYCP3Q8IZU3 236 aa18.1■□□□□ 0.49
LSS-205ENST00000457828 ANKRD13CQ8N6S4 541 aa18.1■□□□□ 0.49
LSS-205ENST00000457828 TC2NQ8N9U0 490 aa18.1■□□□□ 0.49
LSS-205ENST00000457828 GLT8D2Q9H1C3 349 aa18.1■□□□□ 0.49
LSS-205ENST00000457828 DDR1Q08345 913 aa18.1■□□□□ 0.49
LSS-205ENST00000457828 REXO1Q8N1G1 1221 aaKnown RBP18.1■□□□□ 0.49
LSS-205ENST00000457828 SMCO2A6NFE2 343 aa18.09■□□□□ 0.49
LSS-205ENST00000457828 POLRMTO00411 1230 aaKnown RBP18.09■□□□□ 0.49
LSS-205ENST00000457828 MAP3K9P80192 1104 aa18.09■□□□□ 0.49
LSS-205ENST00000457828 KCTD1Q719H9 257 aa18.09■□□□□ 0.49
LSS-205ENST00000457828 LY9Q9HBG7 655 aa18.09■□□□□ 0.49
LSS-205ENST00000457828 KRT31Q15323 416 aa18.09■□□□□ 0.49
LSS-205ENST00000457828 PPM1EQ8WY54 764 aa18.09■□□□□ 0.49
LSS-205ENST00000457828 ZNF446Q9NWS9 450 aa18.09■□□□□ 0.49
LSS-205ENST00000457828 RPN1P04843 607 aaKnown RBP18.09■□□□□ 0.49
LSS-205ENST00000457828 MRPS25P82663 173 aaKnown RBP18.09■□□□□ 0.49
LSS-205ENST00000457828 NONOQ15233 471 aaKnown RBP eCLIP18.09■□□□□ 0.494e-8■■■■■ 32.2
LSS-205ENST00000457828 C3orf67Q6ZVT6 689 aa18.09■□□□□ 0.49
LSS-205ENST00000457828 SPAG5Q96R06 1193 aa18.09■□□□□ 0.49
LSS-205ENST00000457828 DCP1AQ9NPI6 582 aaPredicted RBP18.09■□□□□ 0.49
LSS-205ENST00000457828 ANKRD26Q9UPS8 1709 aa18.09■□□□□ 0.49
LSS-205ENST00000457828 KLRK1P26718 216 aa18.09■□□□□ 0.49
LSS-205ENST00000457828 GPKOWQ92917 476 aaPredicted RBP eCLIP18.09■□□□□ 0.49
LSS-205ENST00000457828 MED4Q9NPJ6 270 aa18.09■□□□□ 0.49
LSS-205ENST00000457828 GOLGA6L7A0A1B0GV03 622 aa18.08■□□□□ 0.49
LSS-205ENST00000457828 CCNT1O60563 726 aaKnown RBP18.08■□□□□ 0.49
LSS-205ENST00000457828 RASGRP4Q8TDF6 673 aa18.08■□□□□ 0.49
LSS-205ENST00000457828 IFIH1Q9BYX4 1025 aaKnown RBP18.08■□□□□ 0.49
LSS-205ENST00000457828 SRGAP2O75044 1071 aa18.08■□□□□ 0.48
LSS-205ENST00000457828 HPDP32754 393 aaPredicted RBP18.08■□□□□ 0.48
LSS-205ENST00000457828 SLC16A2P36021 539 aa18.08■□□□□ 0.48
LSS-205ENST00000457828 TXKP42681 527 aa18.08■□□□□ 0.48
LSS-205ENST00000457828 GIMAP7Q8NHV1 300 aa18.08■□□□□ 0.48
LSS-205ENST00000457828 SUGCTQ9HAC7 445 aa18.08■□□□□ 0.48
LSS-205ENST00000457828 NRXN3Q9Y4C0 1643 aa18.08■□□□□ 0.48
LSS-205ENST00000457828 IQCA1LA6NCM1 817 aa18.08■□□□□ 0.48
LSS-205ENST00000457828 GTPBP6O43824 516 aaPredicted RBP18.08■□□□□ 0.48
LSS-205ENST00000457828 MAGEA1P43355 309 aa18.08■□□□□ 0.48
LSS-205ENST00000457828 LIG3P49916 1009 aa18.08■□□□□ 0.48
LSS-205ENST00000457828 ANKRD35Q8N283 1001 aa18.08■□□□□ 0.48
LSS-205ENST00000457828 WRNIP1Q96S55 665 aa18.08■□□□□ 0.48
LSS-205ENST00000457828 SCAF8Q9UPN6 1271 aaKnown RBP18.08■□□□□ 0.48
LSS-205ENST00000457828 CYP27A1Q02318 531 aa18.07■□□□□ 0.48
LSS-205ENST00000457828 NCAPG2Q86XI2 1143 aa18.07■□□□□ 0.48
LSS-205ENST00000457828 FBXO11Q86XK2 927 aa18.07■□□□□ 0.48
LSS-205ENST00000457828 TRIM66O15016 1216 aa18.07■□□□□ 0.48
LSS-205ENST00000457828 ASNSP08243 561 aa18.07■□□□□ 0.48
LSS-205ENST00000457828 DYMQ7RTS9 669 aa18.07■□□□□ 0.48
LSS-205ENST00000457828 RNF26Q9BY78 433 aaPredicted RBP18.07■□□□□ 0.48
LSS-205ENST00000457828 PCDHA1Q9Y5I3 950 aa18.07■□□□□ 0.48
LSS-205ENST00000457828 DLG5Q8TDM6 1919 aa18.07■□□□□ 0.48
LSS-205ENST00000457828 DDX39AO00148 427 aaKnown RBP18.07■□□□□ 0.48
LSS-205ENST00000457828 PSMD14O00487 310 aa18.07■□□□□ 0.48
LSS-205ENST00000457828 CCT5P48643 541 aa18.07■□□□□ 0.48
LSS-205ENST00000457828 BCAS4Q8TDM0 211 aa18.07■□□□□ 0.48
LSS-205ENST00000457828 NSUN4Q96CB9 384 aaKnown RBP18.07■□□□□ 0.48
LSS-205ENST00000457828 GDAQ9Y2T3 454 aa18.07■□□□□ 0.48
LSS-205ENST00000457828 FAM205CA6NFA0 338 aa18.07■□□□□ 0.48
LSS-205ENST00000457828 NDUFA10O95299 355 aa18.07■□□□□ 0.48
LSS-205ENST00000457828 TBC1D8O95759 1140 aa18.07■□□□□ 0.48
LSS-205ENST00000457828 RAD9BQ6WBX8 426 aa18.07■□□□□ 0.48
LSS-205ENST00000457828 ATP1A2P50993 1020 aa18.06■□□□□ 0.48
LSS-205ENST00000457828 VSNL1P62760 191 aa18.06■□□□□ 0.48
LSS-205ENST00000457828 USP17L2Q6R6M4 530 aa18.06■□□□□ 0.48
LSS-205ENST00000457828 BICD1Q96G01 975 aa18.06■□□□□ 0.48
LSS-205ENST00000457828 POLLQ9UGP5 575 aa18.06■□□□□ 0.48
LSS-205ENST00000457828 TGFB2P61812 414 aa18.06■□□□□ 0.48
LSS-205ENST00000457828 LRRC27Q9C0I9 530 aa18.06■□□□□ 0.48
LSS-205ENST00000457828 PSTPIP2Q9H939 334 aa18.06■□□□□ 0.48
LSS-205ENST00000457828 NLRC4Q9NPP4 1024 aa18.06■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms