RNA–Protein interactions for RNA: ENST00000455656.1

TMEM56-202, Transcript of transmembrane protein 56, humanhuman

TSL 5

Gene TMEM56, Length 609 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM56-202ENST00000455656 HABP4Q5JVS0 413 aaKnown RBP13.8□□□□□ -0.2
TMEM56-202ENST00000455656 C1orf53Q5VUE5 145 aa13.8□□□□□ -0.2
TMEM56-202ENST00000455656 ERICH6BQ5W0A0 696 aa13.8□□□□□ -0.2
TMEM56-202ENST00000455656 CHRDL2Q6WN34 429 aa13.8□□□□□ -0.2
TMEM56-202ENST00000455656 FBXO11Q86XK2 927 aa13.8□□□□□ -0.2
TMEM56-202ENST00000455656 ZNF654Q8IZM8 581 aa13.8□□□□□ -0.2
TMEM56-202ENST00000455656 TMEM87BQ96K49 555 aa13.8□□□□□ -0.2
TMEM56-202ENST00000455656 MAP3K14Q99558 947 aa13.8□□□□□ -0.2
TMEM56-202ENST00000455656 MYL10Q9BUA6 226 aa13.8□□□□□ -0.2
TMEM56-202ENST00000455656 LRRC2Q9BYS8 371 aa13.8□□□□□ -0.2
TMEM56-202ENST00000455656 PPP4R2Q9NY27 417 aa13.8□□□□□ -0.2
TMEM56-202ENST00000455656 A0A1W2PQ45 241 aaPredicted RBP13.79□□□□□ -0.2
TMEM56-202ENST00000455656 A0A1W2PQY0 241 aa13.79□□□□□ -0.2
TMEM56-202ENST00000455656 RBM47A0AV96 593 aaKnown RBP13.79□□□□□ -0.2
TMEM56-202ENST00000455656 ZBTB5O15062 677 aa13.79□□□□□ -0.2
TMEM56-202ENST00000455656 DDAH1O94760 285 aa13.79□□□□□ -0.2
TMEM56-202ENST00000455656 SMPD1P17405 629 aa13.79□□□□□ -0.2
TMEM56-202ENST00000455656 SYN1P17600 705 aa13.79□□□□□ -0.2
TMEM56-202ENST00000455656 CALML3P27482 149 aa13.79□□□□□ -0.2
TMEM56-202ENST00000455656 RTP1P59025 263 aa13.79□□□□□ -0.2
TMEM56-202ENST00000455656 EEPD1Q7L9B9 569 aa13.79□□□□□ -0.2
TMEM56-202ENST00000455656 RNF180Q86T96 592 aa13.79□□□□□ -0.2
TMEM56-202ENST00000455656 DNERQ8NFT8 737 aa13.79□□□□□ -0.2
TMEM56-202ENST00000455656 SYTL5Q8TDW5 730 aaPredicted RBP13.79□□□□□ -0.2
TMEM56-202ENST00000455656 FERMT2Q96AC1 680 aa13.79□□□□□ -0.2
TMEM56-202ENST00000455656 PIGSQ96S52 555 aa13.79□□□□□ -0.2
TMEM56-202ENST00000455656 GDF15Q99988 308 aa13.79□□□□□ -0.2
TMEM56-202ENST00000455656 TSEN34Q9BSV6 310 aaKnown RBP13.79□□□□□ -0.2
TMEM56-202ENST00000455656 VTA1Q9NP79 307 aa13.79□□□□□ -0.2
TMEM56-202ENST00000455656 RBM27Q9P2N5 1060 aaKnown RBP13.79□□□□□ -0.2
TMEM56-202ENST00000455656 ZMYND8Q9ULU4 1186 aaPredicted RBP13.79□□□□□ -0.2
TMEM56-202ENST00000455656 ACLYP53396 1101 aa13.78□□□□□ -0.2
TMEM56-202ENST00000455656 CASC1Q6TDU7 716 aa13.78□□□□□ -0.2
TMEM56-202ENST00000455656 CATIPQ7Z7H3 387 aa13.78□□□□□ -0.2
TMEM56-202ENST00000455656 SGMS1Q86VZ5 419 aa13.78□□□□□ -0.2
TMEM56-202ENST00000455656 NEK1Q96PY6 1258 aa13.78□□□□□ -0.2
TMEM56-202ENST00000455656 TAAR1Q96RJ0 339 aa13.78□□□□□ -0.2
TMEM56-202ENST00000455656 AMNQ9BXJ7 453 aa13.78□□□□□ -0.2
TMEM56-202ENST00000455656 ADD3Q9UEY8 706 aaKnown RBP13.78□□□□□ -0.2
TMEM56-202ENST00000455656 RANBP2P49792 3224 aaKnown RBP13.78□□□□□ -0.2
TMEM56-202ENST00000455656 DHX16O60231 1041 aaKnown RBP13.77□□□□□ -0.21
TMEM56-202ENST00000455656 PLEKHA8P1O95397 391 aa13.77□□□□□ -0.21
TMEM56-202ENST00000455656 MYCNP04198 464 aaPredicted RBP13.77□□□□□ -0.21
TMEM56-202ENST00000455656 RXRAP19793 462 aa13.77□□□□□ -0.21
TMEM56-202ENST00000455656 HSPA4P34932 840 aa13.77□□□□□ -0.21
TMEM56-202ENST00000455656 HSD17B4P51659 736 aa13.77□□□□□ -0.21
TMEM56-202ENST00000455656 TNFAIP2Q03169 654 aa13.77□□□□□ -0.21
TMEM56-202ENST00000455656 KCNA10Q16322 511 aa13.77□□□□□ -0.21
TMEM56-202ENST00000455656 TRIM60Q495X7 471 aa13.77□□□□□ -0.21
TMEM56-202ENST00000455656 RNF20Q5VTR2 975 aa13.77□□□□□ -0.21
TMEM56-202ENST00000455656 IQSEC1Q6DN90 963 aa13.77□□□□□ -0.21
TMEM56-202ENST00000455656 SRBD1Q8N5C6 995 aaKnown RBP13.77□□□□□ -0.21
TMEM56-202ENST00000455656 TCEANC2Q96MN5 208 aa13.77□□□□□ -0.21
TMEM56-202ENST00000455656 SPZ1Q9BXG8 430 aa13.77□□□□□ -0.21
TMEM56-202ENST00000455656 MRPL11Q9Y3B7 192 aaKnown RBP13.77□□□□□ -0.21
TMEM56-202ENST00000455656 MOXD2PA6NHM9 499 aa13.76□□□□□ -0.21
TMEM56-202ENST00000455656 ASGR1P07306 291 aa13.76□□□□□ -0.21
TMEM56-202ENST00000455656 C6orf222P0C671 652 aaPredicted RBP13.76□□□□□ -0.21
TMEM56-202ENST00000455656 SMARCA1P28370 1054 aa13.76□□□□□ -0.21
TMEM56-202ENST00000455656 BEX3Q00994 111 aa13.76□□□□□ -0.21
TMEM56-202ENST00000455656 TLK2Q86UE8 772 aa13.76□□□□□ -0.21
TMEM56-202ENST00000455656 HOMER1Q86YM7 354 aa13.76□□□□□ -0.21
TMEM56-202ENST00000455656 RAB11FIP4Q86YS3 637 aa13.76□□□□□ -0.21
TMEM56-202ENST00000455656 TMTC2Q8N394 836 aa13.76□□□□□ -0.21
TMEM56-202ENST00000455656 NUP133Q8WUM0 1156 aa13.76□□□□□ -0.21
TMEM56-202ENST00000455656 BRPF3Q9ULD4 1205 aa13.76□□□□□ -0.21
TMEM56-202ENST00000455656 Q9Y3F1 56 aa13.76□□□□□ -0.21
TMEM56-202ENST00000455656 PCDHA1Q9Y5I3 950 aa13.76□□□□□ -0.21
TMEM56-202ENST00000455656 MYH7BA7E2Y1 1941 aa13.76□□□□□ -0.21
TMEM56-202ENST00000455656 SCN10AQ9Y5Y9 1956 aa13.75□□□□□ -0.21
TMEM56-202ENST00000455656 PNMA6FA0A0J9YX94 578 aa13.75□□□□□ -0.21
TMEM56-202ENST00000455656 CCDC69A6NI79 296 aa13.75□□□□□ -0.21
TMEM56-202ENST00000455656 CPA1P15085 419 aa13.75□□□□□ -0.21
TMEM56-202ENST00000455656 BMP8BP34820 402 aa13.75□□□□□ -0.21
TMEM56-202ENST00000455656 MAGEA10P43363 369 aaPredicted RBP13.75□□□□□ -0.21
TMEM56-202ENST00000455656 FXR1P51114 621 aaKnown RBP eCLIP13.75□□□□□ -0.21
TMEM56-202ENST00000455656 DUSP28Q4G0W2 176 aa13.75□□□□□ -0.21
TMEM56-202ENST00000455656 APOA5Q6Q788 366 aa13.75□□□□□ -0.21
TMEM56-202ENST00000455656 DHX32Q7L7V1 743 aaKnown RBP13.75□□□□□ -0.21
TMEM56-202ENST00000455656 SH3RF1Q7Z6J0 888 aa13.75□□□□□ -0.21
TMEM56-202ENST00000455656 MCF2L2Q86YR7 1114 aa13.75□□□□□ -0.21
TMEM56-202ENST00000455656 CMTR1Q8N1G2 835 aaKnown RBP13.75□□□□□ -0.21
TMEM56-202ENST00000455656 CTCFLQ8NI51 663 aaPredicted RBP13.75□□□□□ -0.21
TMEM56-202ENST00000455656 PDLIM7Q9NR12 457 aa13.75□□□□□ -0.21
TMEM56-202ENST00000455656 ATP11BQ9Y2G3 1177 aa13.75□□□□□ -0.21
TMEM56-202ENST00000455656 SNX14Q9Y5W7 946 aa13.75□□□□□ -0.21
TMEM56-202ENST00000455656 TRIOBPQ9H2D6 2365 aa13.74□□□□□ -0.21
TMEM56-202ENST00000455656 ARIH2O95376 493 aa13.74□□□□□ -0.21
TMEM56-202ENST00000455656 CFBP00751 764 aa13.74□□□□□ -0.21
TMEM56-202ENST00000455656 CENPBP07199 599 aaPredicted RBP13.74□□□□□ -0.21
TMEM56-202ENST00000455656 CDK7P50613 346 aa13.74□□□□□ -0.21
TMEM56-202ENST00000455656 GNASQ5JWF2 1037 aa13.74□□□□□ -0.21
TMEM56-202ENST00000455656 NFXL1Q6ZNB6 911 aa13.74□□□□□ -0.21
TMEM56-202ENST00000455656 TMTC3Q6ZXV5 915 aa13.74□□□□□ -0.21
TMEM56-202ENST00000455656 WDR11Q9BZH6 1224 aa13.74□□□□□ -0.21
TMEM56-202ENST00000455656 PXMP2Q9NR77 195 aa13.74□□□□□ -0.21
TMEM56-202ENST00000455656 MAP3K20Q9NYL2 800 aaKnown RBP13.74□□□□□ -0.21
TMEM56-202ENST00000455656 GRIN2DO15399 1336 aa13.73□□□□□ -0.21
TMEM56-202ENST00000455656 ELP1O95163 1332 aa13.73□□□□□ -0.21
TMEM56-202ENST00000455656 FRMPD4Q14CM0 1322 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms