RNA–Protein interactions for RNA: ENST00000454830.6

CLK3-203, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 3,787 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-203ENST00000454830 ZHX3Q9H4I2 956 aa15.36■□□□□ 0.05
CLK3-203ENST00000454830 SPTLC3Q9NUV7 552 aa15.36■□□□□ 0.05
CLK3-203ENST00000454830 ADKP55263 362 aaKnown RBP15.35■□□□□ 0.05
CLK3-203ENST00000454830 RBM10P98175 930 aaKnown RBP15.35■□□□□ 0.05
CLK3-203ENST00000454830 PTPN14Q15678 1187 aa15.35■□□□□ 0.05
CLK3-203ENST00000454830 TATDN1Q6P1N9 297 aa15.35■□□□□ 0.05
CLK3-203ENST00000454830 PPFIBP1Q86W92 1011 aa15.35■□□□□ 0.05
CLK3-203ENST00000454830 AK8Q96MA6 479 aa15.35■□□□□ 0.05
CLK3-203ENST00000454830 PSMD1Q99460 953 aa15.35■□□□□ 0.05
CLK3-203ENST00000454830 NRXN2Q9P2S2 1712 aa15.35■□□□□ 0.05
CLK3-203ENST00000454830 SHTN1A0MZ66 631 aa15.35■□□□□ 0.05
CLK3-203ENST00000454830 FAM83BQ5T0W9 1011 aa15.35■□□□□ 0.05
CLK3-203ENST00000454830 FAM177A1Q8N128 213 aaPredicted RBP15.35■□□□□ 0.05
CLK3-203ENST00000454830 CCSER1Q9C0I3 900 aa15.35■□□□□ 0.05
CLK3-203ENST00000454830 TRIM49BA6NDI0 452 aa15.35■□□□□ 0.05
CLK3-203ENST00000454830 PPP1R3GB7ZBB8 358 aa15.35■□□□□ 0.05
CLK3-203ENST00000454830 VIL1P09327 827 aaKnown RBP15.35■□□□□ 0.05
CLK3-203ENST00000454830 CCZ1BP86790 482 aa15.35■□□□□ 0.05
CLK3-203ENST00000454830 CCZ1P86791 482 aaPredicted RBP15.35■□□□□ 0.05
CLK3-203ENST00000454830 AMPD3Q01432 767 aa15.35■□□□□ 0.05
CLK3-203ENST00000454830 R3HDM1Q15032 1099 aaKnown RBP15.35■□□□□ 0.05
CLK3-203ENST00000454830 ZNF658Q5TYW1 1059 aaPredicted RBP15.35■□□□□ 0.05
CLK3-203ENST00000454830 SV2BQ7L1I2 683 aa15.35■□□□□ 0.05
CLK3-203ENST00000454830 VSTM4Q8IW00 320 aa15.35■□□□□ 0.05
CLK3-203ENST00000454830 SPATA20Q8TB22 786 aa15.35■□□□□ 0.05
CLK3-203ENST00000454830 FAM151AQ8WW52 585 aa15.35■□□□□ 0.05
CLK3-203ENST00000454830 TAB2Q9NYJ8 693 aa15.35■□□□□ 0.05
CLK3-203ENST00000454830 PCDHA12Q9UN75 941 aa15.35■□□□□ 0.05
CLK3-203ENST00000454830 A0A1W2PRG0 241 aa15.34■□□□□ 0.05
CLK3-203ENST00000454830 CFBP00751 764 aa15.34■□□□□ 0.05
CLK3-203ENST00000454830 PRCPP42785 496 aa15.34■□□□□ 0.05
CLK3-203ENST00000454830 NAALADL2Q58DX5 795 aa15.34■□□□□ 0.05
CLK3-203ENST00000454830 MED15Q96RN5 788 aa15.34■□□□□ 0.05
CLK3-203ENST00000454830 ANO3Q9BYT9 981 aa15.34■□□□□ 0.05
CLK3-203ENST00000454830 HERC5Q9UII4 1024 aaKnown RBP15.34■□□□□ 0.05
CLK3-203ENST00000454830 MORC2Q9Y6X9 1032 aaPredicted RBP15.34■□□□□ 0.05
CLK3-203ENST00000454830 PSMA7O14818 248 aa15.34■□□□□ 0.05
CLK3-203ENST00000454830 TPM2P07951 284 aa15.34■□□□□ 0.05
CLK3-203ENST00000454830 MCM6Q14566 821 aa15.34■□□□□ 0.05
CLK3-203ENST00000454830 PRR16Q569H4 304 aa15.34■□□□□ 0.05
CLK3-203ENST00000454830 SIAH1Q8IUQ4 282 aa15.34■□□□□ 0.05
CLK3-203ENST00000454830 KCNA3P22001 575 aa15.34■□□□□ 0.05
CLK3-203ENST00000454830 GRIPAP1Q4V328 841 aa15.34■□□□□ 0.05
CLK3-203ENST00000454830 TSC1Q92574 1164 aa15.34■□□□□ 0.05
CLK3-203ENST00000454830 MAGEC2Q9UBF1 373 aaPredicted RBP15.34■□□□□ 0.05
CLK3-203ENST00000454830 TEX33O43247 280 aa15.33■□□□□ 0.05
CLK3-203ENST00000454830 SPECC1LQ69YQ0 1117 aa15.33■□□□□ 0.05
CLK3-203ENST00000454830 PPP1R18Q6NYC8 613 aa15.33■□□□□ 0.05
CLK3-203ENST00000454830 HPS3Q969F9 1004 aa15.33■□□□□ 0.05
CLK3-203ENST00000454830 ARID3AQ99856 593 aa15.33■□□□□ 0.05
CLK3-203ENST00000454830 RAD51AP2Q09MP3 1159 aa15.33■□□□□ 0.04
CLK3-203ENST00000454830 MKL1Q969V6 931 aa15.33■□□□□ 0.04
CLK3-203ENST00000454830 GOPCQ9HD26 462 aa15.33■□□□□ 0.04
CLK3-203ENST00000454830 KRT18P05783 430 aaKnown RBP15.33■□□□□ 0.04
CLK3-203ENST00000454830 TPM1P09493 284 aa15.33■□□□□ 0.04
CLK3-203ENST00000454830 STAT2P52630 851 aa15.33■□□□□ 0.04
CLK3-203ENST00000454830 ZFP91Q96JP5 570 aaPredicted RBP15.33■□□□□ 0.04
CLK3-203ENST00000454830 PCMTD1Q96MG8 357 aaPredicted RBP15.33■□□□□ 0.04
CLK3-203ENST00000454830 ZBTB21Q9ULJ3 1066 aa15.33■□□□□ 0.04
CLK3-203ENST00000454830 PSDA5PKW4 1024 aaPredicted RBP15.32■□□□□ 0.04
CLK3-203ENST00000454830 UBXN2AP68543 259 aa15.32■□□□□ 0.04
CLK3-203ENST00000454830 SLC39A2Q9NP94 309 aa15.32■□□□□ 0.04
CLK3-203ENST00000454830 TNS1Q9HBL0 1735 aaKnown RBP15.32■□□□□ 0.04
CLK3-203ENST00000454830 TBC1D10BQ4KMP7 808 aaPredicted RBP15.32■□□□□ 0.04
CLK3-203ENST00000454830 IGSF22Q8N9C0 903 aa15.32■□□□□ 0.04
CLK3-203ENST00000454830 PRKCSHP14314 528 aaPredicted RBP15.32■□□□□ 0.04
CLK3-203ENST00000454830 SPDYE2Q495Y8 402 aa15.32■□□□□ 0.04
CLK3-203ENST00000454830 CEP135Q66GS9 1140 aa15.32■□□□□ 0.04
CLK3-203ENST00000454830 INTS13Q9NVM9 706 aa15.32■□□□□ 0.04
CLK3-203ENST00000454830 PRR12Q9ULL5 1215 aa15.32■□□□□ 0.04
CLK3-203ENST00000454830 ZNF18P17022 549 aa15.31■□□□□ 0.04
CLK3-203ENST00000454830 ERCC3P19447 782 aa15.31■□□□□ 0.04
CLK3-203ENST00000454830 CTAGE1Q96RT6 745 aa15.31■□□□□ 0.04
CLK3-203ENST00000454830 SRRTQ9BXP5 876 aaKnown RBP15.31■□□□□ 0.04
CLK3-203ENST00000454830 GLT8D2Q9H1C3 349 aa15.31■□□□□ 0.04
CLK3-203ENST00000454830 WNT10BO00744 389 aa15.31■□□□□ 0.04
CLK3-203ENST00000454830 RASA3Q14644 834 aa15.31■□□□□ 0.04
CLK3-203ENST00000454830 LARP4BQ92615 738 aaKnown RBP15.31■□□□□ 0.04
CLK3-203ENST00000454830 NUDT12Q9BQG2 462 aa15.31■□□□□ 0.04
CLK3-203ENST00000454830 C10orf71Q711Q0 1435 aa15.31■□□□□ 0.04
CLK3-203ENST00000454830 KCNJ18B7U540 433 aa15.31■□□□□ 0.04
CLK3-203ENST00000454830 NPM3O75607 178 aaKnown RBP15.31■□□□□ 0.04
CLK3-203ENST00000454830 FCER1AP12319 257 aa15.31■□□□□ 0.04
CLK3-203ENST00000454830 KCNJ12Q14500 433 aa15.31■□□□□ 0.04
CLK3-203ENST00000454830 SAMD7Q7Z3H4 446 aa15.31■□□□□ 0.04
CLK3-203ENST00000454830 TRIM9Q9C026 710 aa15.31■□□□□ 0.04
CLK3-203ENST00000454830 TMX1Q9H3N1 280 aa15.31■□□□□ 0.04
CLK3-203ENST00000454830 MYOZ2Q9NPC6 264 aa15.31■□□□□ 0.04
CLK3-203ENST00000454830 CTDP1Q9Y5B0 961 aaPredicted RBP15.31■□□□□ 0.04
CLK3-203ENST00000454830 MYH4Q9Y623 1939 aa15.3■□□□□ 0.04
CLK3-203ENST00000454830 STAT3P40763 770 aa15.3■□□□□ 0.04
CLK3-203ENST00000454830 NCAPH2Q6IBW4 605 aa15.3■□□□□ 0.04
CLK3-203ENST00000454830 CCAR2Q8N163 923 aaKnown RBP15.3■□□□□ 0.04
CLK3-203ENST00000454830 KBTBD4Q9NVX7 518 aa15.3■□□□□ 0.04
CLK3-203ENST00000454830 TBC1D7Q9P0N9 293 aa15.3■□□□□ 0.04
CLK3-203ENST00000454830 RWDD2AQ9UIY3 292 aa15.3■□□□□ 0.04
CLK3-203ENST00000454830 ARHGAP4P98171 946 aa15.3■□□□□ 0.04
CLK3-203ENST00000454830 CPXCR1Q8N123 301 aa15.3■□□□□ 0.04
CLK3-203ENST00000454830 CSGALNACT2Q8N6G5 542 aa15.3■□□□□ 0.04
CLK3-203ENST00000454830 AGBL3Q8NEM8 1001 aa15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms