RNA–Protein interactions for RNA: ENST00000454542.5

HDAC4-205, Transcript of histone deacetylase 4, humanhuman

TSL 4

Gene HDAC4, Length 565 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-205ENST00000454542 CCDC144CPQ8IYA2 1237 aa16.44■□□□□ 0.22
HDAC4-205ENST00000454542 VAT1LQ9HCJ6 419 aa16.44■□□□□ 0.22
HDAC4-205ENST00000454542 FAM217BQ9NTX9 383 aaPredicted RBP16.44■□□□□ 0.22
HDAC4-205ENST00000454542 MRPL11Q9Y3B7 192 aaKnown RBP16.44■□□□□ 0.22
HDAC4-205ENST00000454542 ALPK3Q96L96 1907 aa16.44■□□□□ 0.22
HDAC4-205ENST00000454542 ASB14A6NK59 587 aa16.43■□□□□ 0.22
HDAC4-205ENST00000454542 FARP2O94887 1054 aaPredicted RBP16.43■□□□□ 0.22
HDAC4-205ENST00000454542 SEC24BO95487 1268 aa16.43■□□□□ 0.22
HDAC4-205ENST00000454542 HSD17B4P51659 736 aa16.43■□□□□ 0.22
HDAC4-205ENST00000454542 TRAF1Q13077 416 aa16.43■□□□□ 0.22
HDAC4-205ENST00000454542 TOB2Q14106 344 aaPredicted RBP16.43■□□□□ 0.22
HDAC4-205ENST00000454542 RTN1Q16799 776 aa16.43■□□□□ 0.22
HDAC4-205ENST00000454542 PRAMEF19Q5SWL8 479 aa16.43■□□□□ 0.22
HDAC4-205ENST00000454542 BRF1Q92994 677 aa16.43■□□□□ 0.22
HDAC4-205ENST00000454542 PURBQ96QR8 312 aaKnown RBP16.43■□□□□ 0.22
HDAC4-205ENST00000454542 ADD3Q9UEY8 706 aaKnown RBP16.43■□□□□ 0.22
HDAC4-205ENST00000454542 PTPDC1A2A3K4 754 aa16.42■□□□□ 0.22
HDAC4-205ENST00000454542 GOLGA8AA7E2F4 631 aa16.42■□□□□ 0.22
HDAC4-205ENST00000454542 GOLGA8BA8MQT2 603 aa16.42■□□□□ 0.22
HDAC4-205ENST00000454542 AKR1A1P14550 325 aa16.42■□□□□ 0.22
HDAC4-205ENST00000454542 APOBRQ0VD83 1088 aa16.42■□□□□ 0.22
HDAC4-205ENST00000454542 SYNE3Q6ZMZ3 975 aa16.42■□□□□ 0.22
HDAC4-205ENST00000454542 MCF2L2Q86YR7 1114 aa16.42■□□□□ 0.22
HDAC4-205ENST00000454542 SAMD3Q8N6K7 520 aa16.42■□□□□ 0.22
HDAC4-205ENST00000454542 DNERQ8NFT8 737 aa16.42■□□□□ 0.22
HDAC4-205ENST00000454542 SYTL5Q8TDW5 730 aaPredicted RBP16.42■□□□□ 0.22
HDAC4-205ENST00000454542 ABHD16BQ9H3Z7 469 aa16.42■□□□□ 0.22
HDAC4-205ENST00000454542 COL20A1Q9P218 1284 aa16.42■□□□□ 0.22
HDAC4-205ENST00000454542 CNPY2Q9Y2B0 182 aa16.42■□□□□ 0.22
HDAC4-205ENST00000454542 PCDHA1Q9Y5I3 950 aa16.42■□□□□ 0.22
HDAC4-205ENST00000454542 CYP46A1Q9Y6A2 500 aa16.42■□□□□ 0.22
HDAC4-205ENST00000454542 CALML3P27482 149 aa16.41■□□□□ 0.22
HDAC4-205ENST00000454542 CDC27P30260 824 aa16.41■□□□□ 0.22
HDAC4-205ENST00000454542 ACVR2BQ13705 512 aa16.41■□□□□ 0.22
HDAC4-205ENST00000454542 PPP2R5BQ15173 497 aa16.41■□□□□ 0.22
HDAC4-205ENST00000454542 TBC1D5Q92609 795 aa16.41■□□□□ 0.22
HDAC4-205ENST00000454542 RRP36Q96EU6 259 aaKnown RBP16.41■□□□□ 0.22
HDAC4-205ENST00000454542 UPF3BQ9BZI7 483 aaKnown RBP16.41■□□□□ 0.22
HDAC4-205ENST00000454542 MAP3K20Q9NYL2 800 aaKnown RBP16.41■□□□□ 0.22
HDAC4-205ENST00000454542 ADCY6O43306 1168 aa16.4■□□□□ 0.22
HDAC4-205ENST00000454542 TFRCP02786 760 aaKnown RBP16.4■□□□□ 0.22
HDAC4-205ENST00000454542 COL6A1P12109 1028 aa16.4■□□□□ 0.22
HDAC4-205ENST00000454542 METAP2P50579 478 aaKnown RBP eCLIP16.4■□□□□ 0.22
HDAC4-205ENST00000454542 CMTR1Q8N1G2 835 aaKnown RBP16.4■□□□□ 0.22
HDAC4-205ENST00000454542 DIS3LQ8TF46 1054 aaKnown RBP16.4■□□□□ 0.22
HDAC4-205ENST00000454542 ALDH8A1Q9H2A2 487 aaPredicted RBP16.4■□□□□ 0.22
HDAC4-205ENST00000454542 VTA1Q9NP79 307 aa16.4■□□□□ 0.22
HDAC4-205ENST00000454542 DDX49Q9Y6V7 483 aaKnown RBP16.4■□□□□ 0.22
HDAC4-205ENST00000454542 FRMPD4Q14CM0 1322 aa16.4■□□□□ 0.22
HDAC4-205ENST00000454542 ADAMTS4O75173 837 aa16.39■□□□□ 0.21
HDAC4-205ENST00000454542 CNGA1P29973 690 aa16.39■□□□□ 0.21
HDAC4-205ENST00000454542 NKX3-2P78367 333 aa16.39■□□□□ 0.21
HDAC4-205ENST00000454542 FGD1P98174 961 aa16.39■□□□□ 0.21
HDAC4-205ENST00000454542 SEC63Q9UGP8 760 aaKnown RBP16.39■□□□□ 0.21
HDAC4-205ENST00000454542 ZHX1Q9UKY1 873 aaPredicted RBP16.39■□□□□ 0.21
HDAC4-205ENST00000454542 KIAA1217Q5T5P2 1943 aa16.39■□□□□ 0.21
HDAC4-205ENST00000454542 RBM47A0AV96 593 aaKnown RBP16.38■□□□□ 0.21
HDAC4-205ENST00000454542 DNM1LO00429 736 aa16.38■□□□□ 0.21
HDAC4-205ENST00000454542 RARBP10826 455 aa16.38■□□□□ 0.21
HDAC4-205ENST00000454542 NTRK3Q16288 839 aa16.38■□□□□ 0.21
HDAC4-205ENST00000454542 TAPT1Q6NXT6 567 aa16.38■□□□□ 0.21
HDAC4-205ENST00000454542 FBXO16Q8IX29 292 aaPredicted RBP16.38■□□□□ 0.21
HDAC4-205ENST00000454542 LENG1Q96BZ8 264 aaPredicted RBP16.38■□□□□ 0.21
HDAC4-205ENST00000454542 UPF3AQ9H1J1 476 aaKnown RBP16.38■□□□□ 0.21
HDAC4-205ENST00000454542 FAM184BQ9ULE4 1060 aa16.38■□□□□ 0.21
HDAC4-205ENST00000454542 SYNRGQ9UMZ2 1314 aa16.38■□□□□ 0.21
HDAC4-205ENST00000454542 CCDC196A0A1B0GTZ2 297 aa16.37■□□□□ 0.21
HDAC4-205ENST00000454542 hCG_1984214I3L0E3 225 aa16.37■□□□□ 0.21
HDAC4-205ENST00000454542 PIK3CDO00329 1044 aa16.37■□□□□ 0.21
HDAC4-205ENST00000454542 DUSP11O75319 330 aaKnown RBP16.37■□□□□ 0.21
HDAC4-205ENST00000454542 CFBP00751 764 aa16.37■□□□□ 0.21
HDAC4-205ENST00000454542 CST5P28325 142 aaPredicted RBP16.37■□□□□ 0.21
HDAC4-205ENST00000454542 PDIA3P30101 505 aaKnown RBP16.37■□□□□ 0.21
HDAC4-205ENST00000454542 CCDC144BQ3MJ40 725 aa16.37■□□□□ 0.21
HDAC4-205ENST00000454542 ANO1Q5XXA6 986 aa16.37■□□□□ 0.21
HDAC4-205ENST00000454542 PPP1R18Q6NYC8 613 aa16.37■□□□□ 0.21
HDAC4-205ENST00000454542 ZNF713Q8N859 430 aaPredicted RBP16.37■□□□□ 0.21
HDAC4-205ENST00000454542 ZNF274Q96GC6 653 aaPredicted RBP16.37■□□□□ 0.21
HDAC4-205ENST00000454542 PAWRQ96IZ0 340 aaKnown RBP16.37■□□□□ 0.21
HDAC4-205ENST00000454542 TAAR1Q96RJ0 339 aa16.37■□□□□ 0.21
HDAC4-205ENST00000454542 XPNPEP3Q9NQH7 507 aa16.37■□□□□ 0.21
HDAC4-205ENST00000454542 PXMP2Q9NR77 195 aa16.37■□□□□ 0.21
HDAC4-205ENST00000454542 GNEQ9Y223 722 aaKnown RBP16.37■□□□□ 0.21
HDAC4-205ENST00000454542 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.36■□□□□ 0.21
HDAC4-205ENST00000454542 GCOM1H8Y6P7 765 aaPredicted RBP16.36■□□□□ 0.21
HDAC4-205ENST00000454542 POLR2MP0CAP2 368 aa16.36■□□□□ 0.21
HDAC4-205ENST00000454542 ADD1P35611 737 aaKnown RBP16.36■□□□□ 0.21
HDAC4-205ENST00000454542 LRRC41Q15345 812 aa16.36■□□□□ 0.21
HDAC4-205ENST00000454542 WWC2Q6AWC2 1192 aa16.36■□□□□ 0.21
HDAC4-205ENST00000454542 NECAB2Q7Z6G3 386 aa16.36■□□□□ 0.21
HDAC4-205ENST00000454542 TEX2Q8IWB9 1127 aa16.36■□□□□ 0.21
HDAC4-205ENST00000454542 KLHDC9Q8NEP7 349 aa16.36■□□□□ 0.21
HDAC4-205ENST00000454542 NSUN6Q8TEA1 469 aaKnown RBP16.36■□□□□ 0.21
HDAC4-205ENST00000454542 PIBF1Q8WXW3 757 aa16.36■□□□□ 0.21
HDAC4-205ENST00000454542 IWS1Q96ST2 819 aa16.36■□□□□ 0.21
HDAC4-205ENST00000454542 MPHOSPH6Q99547 160 aaKnown RBP16.36■□□□□ 0.21
HDAC4-205ENST00000454542 PDRG1Q9NUG6 133 aa16.36■□□□□ 0.21
HDAC4-205ENST00000454542 PDE4DIPQ5VU43 2346 aa16.36■□□□□ 0.21
HDAC4-205ENST00000454542 hCG_1642624A0A1W2PR95 340 aa16.35■□□□□ 0.21
HDAC4-205ENST00000454542 MEIS2O14770 477 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms