RNA–Protein interactions for RNA: ENST00000454441.2

LINC01287-203, Transcript of long intergenic non-protein coding RNA 1287, humanhuman

TSL 5 BASIC

Gene LINC01287, Length 1,007 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01287-203ENST00000454441 VTA1Q9NP79 307 aa13.93□□□□□ -0.18
LINC01287-203ENST00000454441 PDGFCQ9NRA1 345 aa13.93□□□□□ -0.18
LINC01287-203ENST00000454441 TMEM39AQ9NV64 488 aa13.93□□□□□ -0.18
LINC01287-203ENST00000454441 GNEQ9Y223 722 aaKnown RBP13.93□□□□□ -0.18
LINC01287-203ENST00000454441 A0A0U1RQG5 324 aaPredicted RBP13.92□□□□□ -0.18
LINC01287-203ENST00000454441 KIAA0355O15063 1070 aa13.92□□□□□ -0.18
LINC01287-203ENST00000454441 CTAGE5O15320 804 aa13.92□□□□□ -0.18
LINC01287-203ENST00000454441 RAG1P15918 1043 aa13.92□□□□□ -0.18
LINC01287-203ENST00000454441 SMPD1P17405 629 aa13.92□□□□□ -0.18
LINC01287-203ENST00000454441 ITGB8P26012 769 aa13.92□□□□□ -0.18
LINC01287-203ENST00000454441 CHMLP26374 656 aa13.92□□□□□ -0.18
LINC01287-203ENST00000454441 NKX3-2P78367 333 aa13.92□□□□□ -0.18
LINC01287-203ENST00000454441 FAAP100Q0VG06 881 aa13.92□□□□□ -0.18
LINC01287-203ENST00000454441 CDC37Q16543 378 aaPredicted RBP13.92□□□□□ -0.18
LINC01287-203ENST00000454441 ASPRV1Q53RT3 343 aa13.92□□□□□ -0.18
LINC01287-203ENST00000454441 IFIT1BQ5T764 474 aaKnown RBP13.92□□□□□ -0.18
LINC01287-203ENST00000454441 IQSEC1Q6DN90 963 aa13.92□□□□□ -0.18
LINC01287-203ENST00000454441 TAPT1Q6NXT6 567 aa13.92□□□□□ -0.18
LINC01287-203ENST00000454441 KIAA1211Q6ZU35 1233 aa13.92□□□□□ -0.18
LINC01287-203ENST00000454441 Q7L0L9 218 aa13.92□□□□□ -0.18
LINC01287-203ENST00000454441 MORC4Q8TE76 937 aa13.92□□□□□ -0.18
LINC01287-203ENST00000454441 LAMA2P24043 3122 aaKnown RBP13.91□□□□□ -0.18
LINC01287-203ENST00000454441 LOC102724159A0A0B4J2E5 919 aa13.91□□□□□ -0.18
LINC01287-203ENST00000454441 ARVCFO00192 962 aa13.91□□□□□ -0.18
LINC01287-203ENST00000454441 DYNC1LI2O43237 492 aaPredicted RBP13.91□□□□□ -0.18
LINC01287-203ENST00000454441 DHX16O60231 1041 aaKnown RBP13.91□□□□□ -0.18
LINC01287-203ENST00000454441 PARP1P09874 1014 aaKnown RBP13.91□□□□□ -0.18
LINC01287-203ENST00000454441 PTGS1P23219 599 aa13.91□□□□□ -0.18
LINC01287-203ENST00000454441 RPS6P62753 249 aaKnown RBP13.91□□□□□ -0.18
LINC01287-203ENST00000454441 TRDNQ13061 729 aa13.91□□□□□ -0.18
LINC01287-203ENST00000454441 PWP2Q15269 919 aaKnown RBP13.91□□□□□ -0.18
LINC01287-203ENST00000454441 SHHQ15465 462 aa13.91□□□□□ -0.18
LINC01287-203ENST00000454441 FSCN1Q16658 493 aaKnown RBP13.91□□□□□ -0.18
LINC01287-203ENST00000454441 C9orf50Q5SZB4 431 aa13.91□□□□□ -0.18
LINC01287-203ENST00000454441 ADGRF4Q8IZF3 695 aa13.91□□□□□ -0.18
LINC01287-203ENST00000454441 MPHOSPH6Q99547 160 aaKnown RBP13.91□□□□□ -0.18
LINC01287-203ENST00000454441 KIAA1217Q5T5P2 1943 aa13.9□□□□□ -0.18
LINC01287-203ENST00000454441 ZEB2O60315 1214 aa13.9□□□□□ -0.18
LINC01287-203ENST00000454441 CDK7P50613 346 aa13.9□□□□□ -0.18
LINC01287-203ENST00000454441 PTH1RQ03431 593 aa13.9□□□□□ -0.18
LINC01287-203ENST00000454441 TMEM63BQ5T3F8 832 aa13.9□□□□□ -0.18
LINC01287-203ENST00000454441 CXCL17Q6UXB2 119 aa13.9□□□□□ -0.18
LINC01287-203ENST00000454441 Q9Y3F1 56 aa13.9□□□□□ -0.18
LINC01287-203ENST00000454441 ABCB11O95342 1321 aa13.9□□□□□ -0.19
LINC01287-203ENST00000454441 TLR3O15455 904 aaKnown RBP13.89□□□□□ -0.19
LINC01287-203ENST00000454441 CABYRO75952 493 aa13.89□□□□□ -0.19
LINC01287-203ENST00000454441 CYP21A2P08686 494 aa13.89□□□□□ -0.19
LINC01287-203ENST00000454441 FPGSQ05932 587 aa13.89□□□□□ -0.19
LINC01287-203ENST00000454441 PDE4DQ08499 809 aa13.89□□□□□ -0.19
LINC01287-203ENST00000454441 SEC23AQ15436 765 aa13.89□□□□□ -0.19
LINC01287-203ENST00000454441 DUSP28Q4G0W2 176 aa13.89□□□□□ -0.19
LINC01287-203ENST00000454441 CYB5R4Q7L1T6 521 aa13.89□□□□□ -0.19
LINC01287-203ENST00000454441 DNERQ8NFT8 737 aa13.89□□□□□ -0.19
LINC01287-203ENST00000454441 WDR11Q9BZH6 1224 aa13.89□□□□□ -0.19
LINC01287-203ENST00000454441 VAT1LQ9HCJ6 419 aa13.89□□□□□ -0.19
LINC01287-203ENST00000454441 COL6A3P12111 3177 aa13.89□□□□□ -0.19
LINC01287-203ENST00000454441 BAZ2BQ9UIF8 2168 aaKnown RBP13.88□□□□□ -0.19
LINC01287-203ENST00000454441 B4DLN1 442 aa13.88□□□□□ -0.19
LINC01287-203ENST00000454441 SGSM2O43147 1006 aa13.88□□□□□ -0.19
LINC01287-203ENST00000454441 TIMP1P01033 207 aa13.88□□□□□ -0.19
LINC01287-203ENST00000454441 MRPL12P52815 198 aaKnown RBP13.88□□□□□ -0.19
LINC01287-203ENST00000454441 QRICH1Q2TAL8 776 aa13.88□□□□□ -0.19
LINC01287-203ENST00000454441 RALYLQ86SE5 291 aaKnown RBP13.88□□□□□ -0.19
LINC01287-203ENST00000454441 FAM126BQ8IXS8 530 aa13.88□□□□□ -0.19
LINC01287-203ENST00000454441 STAG2Q8N3U4 1231 aa13.88□□□□□ -0.19
LINC01287-203ENST00000454441 MTMR10Q9NXD2 777 aa13.88□□□□□ -0.19
LINC01287-203ENST00000454441 TBX21Q9UL17 535 aa13.88□□□□□ -0.19
LINC01287-203ENST00000454441 RBM47A0AV96 593 aaKnown RBP13.87□□□□□ -0.19
LINC01287-203ENST00000454441 ERICH2A1L162 156 aa13.87□□□□□ -0.19
LINC01287-203ENST00000454441 EDNRBP24530 442 aa13.87□□□□□ -0.19
LINC01287-203ENST00000454441 EPHB4P54760 987 aa13.87□□□□□ -0.19
LINC01287-203ENST00000454441 ITGA7Q13683 1181 aa13.87□□□□□ -0.19
LINC01287-203ENST00000454441 PPP2R5BQ15173 497 aa13.87□□□□□ -0.19
LINC01287-203ENST00000454441 FBXO11Q86XK2 927 aa13.87□□□□□ -0.19
LINC01287-203ENST00000454441 MCF2L2Q86YR7 1114 aa13.87□□□□□ -0.19
LINC01287-203ENST00000454441 RGS22Q8NE09 1264 aa13.87□□□□□ -0.19
LINC01287-203ENST00000454441 OR6J1Q8NGC5 347 aa13.87□□□□□ -0.19
LINC01287-203ENST00000454441 NCOA7Q8NI08 942 aa13.87□□□□□ -0.19
LINC01287-203ENST00000454441 RNPC3Q96LT9 517 aaKnown RBP13.87□□□□□ -0.19
LINC01287-203ENST00000454441 PPP1R12CQ9BZL4 782 aa13.87□□□□□ -0.19
LINC01287-203ENST00000454441 JMJD4Q9H9V9 463 aa13.87□□□□□ -0.19
LINC01287-203ENST00000454441 MRPL11Q9Y3B7 192 aaKnown RBP13.87□□□□□ -0.19
LINC01287-203ENST00000454441 MYH7BA7E2Y1 1941 aa13.86□□□□□ -0.19
LINC01287-203ENST00000454441 KLRF2D3W0D1 207 aa13.86□□□□□ -0.19
LINC01287-203ENST00000454441 E7EWF7 191 aa13.86□□□□□ -0.19
LINC01287-203ENST00000454441 IFIT3O14879 490 aaKnown RBP13.86□□□□□ -0.19
LINC01287-203ENST00000454441 NKRFO15226 690 aaKnown RBP eCLIP13.86□□□□□ -0.19
LINC01287-203ENST00000454441 CPT1AP50416 773 aa13.86□□□□□ -0.19
LINC01287-203ENST00000454441 PSMC6P62333 389 aa13.86□□□□□ -0.19
LINC01287-203ENST00000454441 SART3Q15020 963 aaKnown RBP13.86□□□□□ -0.19
LINC01287-203ENST00000454441 ZNF697Q5TEC3 545 aa13.86□□□□□ -0.19
LINC01287-203ENST00000454441 MFSD5Q6N075 450 aa13.86□□□□□ -0.19
LINC01287-203ENST00000454441 SLC43A3Q8NBI5 491 aa13.86□□□□□ -0.19
LINC01287-203ENST00000454441 SYTL5Q8TDW5 730 aaPredicted RBP13.86□□□□□ -0.19
LINC01287-203ENST00000454441 SCFD2Q8WU76 684 aa13.86□□□□□ -0.19
LINC01287-203ENST00000454441 TBC1D5Q92609 795 aa13.86□□□□□ -0.19
LINC01287-203ENST00000454441 FAM161BQ96MY7 647 aa13.86□□□□□ -0.19
LINC01287-203ENST00000454441 MAF1Q9H063 256 aa13.86□□□□□ -0.19
LINC01287-203ENST00000454441 POLR3EQ9NVU0 708 aa13.86□□□□□ -0.19
LINC01287-203ENST00000454441 MAD2L2Q9UI95 211 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms