RNA–Protein interactions for RNA: ENST00000453796.1

HSPG2-207, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 621 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-207ENST00000453796 MYCNP04198 464 aaPredicted RBP16.96■□□□□ 0.31
HSPG2-207ENST00000453796 SYN1P17600 705 aa16.96■□□□□ 0.31
HSPG2-207ENST00000453796 TSGA10IPQ3SY00 556 aa16.96■□□□□ 0.31
HSPG2-207ENST00000453796 CASC1Q6TDU7 716 aa16.96■□□□□ 0.31
HSPG2-207ENST00000453796 FBXO16Q8IX29 292 aaPredicted RBP16.96■□□□□ 0.31
HSPG2-207ENST00000453796 DNERQ8NFT8 737 aa16.96■□□□□ 0.31
HSPG2-207ENST00000453796 FERMT2Q96AC1 680 aa16.96■□□□□ 0.31
HSPG2-207ENST00000453796 TMEM87BQ96K49 555 aa16.96■□□□□ 0.31
HSPG2-207ENST00000453796 MAP3K14Q99558 947 aa16.96■□□□□ 0.31
HSPG2-207ENST00000453796 GDF15Q99988 308 aa16.96■□□□□ 0.31
HSPG2-207ENST00000453796 VTA1Q9NP79 307 aa16.96■□□□□ 0.31
HSPG2-207ENST00000453796 PDGFCQ9NRA1 345 aa16.96■□□□□ 0.31
HSPG2-207ENST00000453796 A0A1W2PQ45 241 aaPredicted RBP16.95■□□□□ 0.3
HSPG2-207ENST00000453796 A0A1W2PQY0 241 aa16.95■□□□□ 0.3
HSPG2-207ENST00000453796 ZBTB5O15062 677 aa16.95■□□□□ 0.3
HSPG2-207ENST00000453796 DHX16O60231 1041 aaKnown RBP16.95■□□□□ 0.3
HSPG2-207ENST00000453796 GHRHRQ02643 423 aa16.95■□□□□ 0.3
HSPG2-207ENST00000453796 TNFAIP2Q03169 654 aa16.95■□□□□ 0.3
HSPG2-207ENST00000453796 EEPD1Q7L9B9 569 aa16.95■□□□□ 0.3
HSPG2-207ENST00000453796 CATIPQ7Z7H3 387 aa16.95■□□□□ 0.3
HSPG2-207ENST00000453796 ZNF654Q8IZM8 581 aa16.95■□□□□ 0.3
HSPG2-207ENST00000453796 AMNQ9BXJ7 453 aa16.95■□□□□ 0.3
HSPG2-207ENST00000453796 COL20A1Q9P218 1284 aa16.95■□□□□ 0.3
HSPG2-207ENST00000453796 MRPL11Q9Y3B7 192 aaKnown RBP16.95■□□□□ 0.3
HSPG2-207ENST00000453796 RBM47A0AV96 593 aaKnown RBP16.94■□□□□ 0.3
HSPG2-207ENST00000453796 MOXD2PA6NHM9 499 aa16.94■□□□□ 0.3
HSPG2-207ENST00000453796 DDAH1O94760 285 aa16.94■□□□□ 0.3
HSPG2-207ENST00000453796 SMPD1P17405 629 aa16.94■□□□□ 0.3
HSPG2-207ENST00000453796 LIFRP42702 1097 aa16.94■□□□□ 0.3
HSPG2-207ENST00000453796 ACLYP53396 1101 aa16.94■□□□□ 0.3
HSPG2-207ENST00000453796 KCNA10Q16322 511 aa16.94■□□□□ 0.3
HSPG2-207ENST00000453796 TMEM63BQ5T3F8 832 aa16.94■□□□□ 0.3
HSPG2-207ENST00000453796 RNF20Q5VTR2 975 aa16.94■□□□□ 0.3
HSPG2-207ENST00000453796 ERICH6BQ5W0A0 696 aa16.94■□□□□ 0.3
HSPG2-207ENST00000453796 IQSEC1Q6DN90 963 aa16.94■□□□□ 0.3
HSPG2-207ENST00000453796 RASEFQ8IZ41 740 aa16.94■□□□□ 0.3
HSPG2-207ENST00000453796 SYTL5Q8TDW5 730 aaPredicted RBP16.94■□□□□ 0.3
HSPG2-207ENST00000453796 PCDH10Q9P2E7 1040 aa16.94■□□□□ 0.3
HSPG2-207ENST00000453796 C6orf222P0C671 652 aaPredicted RBP16.93■□□□□ 0.3
HSPG2-207ENST00000453796 PTGS1P23219 599 aa16.93■□□□□ 0.3
HSPG2-207ENST00000453796 BMP8BP34820 402 aa16.93■□□□□ 0.3
HSPG2-207ENST00000453796 ADCK5Q3MIX3 580 aa16.93■□□□□ 0.3
HSPG2-207ENST00000453796 TRIM60Q495X7 471 aa16.93■□□□□ 0.3
HSPG2-207ENST00000453796 MCF2L2Q86YR7 1114 aa16.93■□□□□ 0.3
HSPG2-207ENST00000453796 TMTC2Q8N394 836 aa16.93■□□□□ 0.3
HSPG2-207ENST00000453796 KCNB2Q92953 911 aa16.93■□□□□ 0.3
HSPG2-207ENST00000453796 PIGSQ96S52 555 aa16.93■□□□□ 0.3
HSPG2-207ENST00000453796 MYL10Q9BUA6 226 aa16.93■□□□□ 0.3
HSPG2-207ENST00000453796 PPP4R2Q9NY27 417 aa16.93■□□□□ 0.3
HSPG2-207ENST00000453796 ATP11BQ9Y2G3 1177 aa16.93■□□□□ 0.3
HSPG2-207ENST00000453796 Q9Y3F1 56 aa16.93■□□□□ 0.3
HSPG2-207ENST00000453796 SLC34A2O95436 690 aa16.92■□□□□ 0.3
HSPG2-207ENST00000453796 ASGR1P07306 291 aa16.92■□□□□ 0.3
HSPG2-207ENST00000453796 MAGEA10P43363 369 aaPredicted RBP16.92■□□□□ 0.3
HSPG2-207ENST00000453796 FXR1P51114 621 aaKnown RBP eCLIP16.92■□□□□ 0.3
HSPG2-207ENST00000453796 HSD17B4P51659 736 aa16.92■□□□□ 0.3
HSPG2-207ENST00000453796 EXOSC10Q01780 885 aaKnown RBP16.92■□□□□ 0.3
HSPG2-207ENST00000453796 TLK2Q86UE8 772 aa16.92■□□□□ 0.3
HSPG2-207ENST00000453796 SGMS1Q86VZ5 419 aa16.92■□□□□ 0.3
HSPG2-207ENST00000453796 HOMER1Q86YM7 354 aa16.92■□□□□ 0.3
HSPG2-207ENST00000453796 PCSK9Q8NBP7 692 aaKnown RBP16.92■□□□□ 0.3
HSPG2-207ENST00000453796 NUP133Q8WUM0 1156 aa16.92■□□□□ 0.3
HSPG2-207ENST00000453796 NEK1Q96PY6 1258 aa16.92■□□□□ 0.3
HSPG2-207ENST00000453796 TAAR1Q96RJ0 339 aa16.92■□□□□ 0.3
HSPG2-207ENST00000453796 SPZ1Q9BXG8 430 aa16.92■□□□□ 0.3
HSPG2-207ENST00000453796 LRRC2Q9BYS8 371 aa16.92■□□□□ 0.3
HSPG2-207ENST00000453796 SPC25Q9HBM1 224 aa16.92■□□□□ 0.3
HSPG2-207ENST00000453796 LAMA3Q16787 3333 aa16.92■□□□□ 0.3
HSPG2-207ENST00000453796 PNMA6FA0A0J9YX94 578 aa16.91■□□□□ 0.3
HSPG2-207ENST00000453796 A0A1W2PPC1 479 aa16.91■□□□□ 0.3
HSPG2-207ENST00000453796 SMARCA1P28370 1054 aa16.91■□□□□ 0.3
HSPG2-207ENST00000453796 DUSP28Q4G0W2 176 aa16.91■□□□□ 0.3
HSPG2-207ENST00000453796 STARD7Q9NQZ5 370 aa16.91■□□□□ 0.3
HSPG2-207ENST00000453796 PDLIM7Q9NR12 457 aa16.91■□□□□ 0.3
HSPG2-207ENST00000453796 PCDHA1Q9Y5I3 950 aa16.91■□□□□ 0.3
HSPG2-207ENST00000453796 ELP1O95163 1332 aa16.91■□□□□ 0.3
HSPG2-207ENST00000453796 MYH7BA7E2Y1 1941 aa16.9■□□□□ 0.3
HSPG2-207ENST00000453796 CCDC69A6NI79 296 aa16.9■□□□□ 0.3
HSPG2-207ENST00000453796 CFBP00751 764 aa16.9■□□□□ 0.3
HSPG2-207ENST00000453796 KIF5BP33176 963 aa16.9■□□□□ 0.3
HSPG2-207ENST00000453796 BEX3Q00994 111 aa16.9■□□□□ 0.3
HSPG2-207ENST00000453796 TLE2Q04725 743 aa16.9■□□□□ 0.3
HSPG2-207ENST00000453796 PDE4DQ08499 809 aa16.9■□□□□ 0.3
HSPG2-207ENST00000453796 GNASQ5JWF2 1037 aa16.9■□□□□ 0.3
HSPG2-207ENST00000453796 SAMD3Q8N6K7 520 aa16.9■□□□□ 0.3
HSPG2-207ENST00000453796 CTCFLQ8NI51 663 aaPredicted RBP16.9■□□□□ 0.3
HSPG2-207ENST00000453796 MPHOSPH6Q99547 160 aaKnown RBP16.9■□□□□ 0.3
HSPG2-207ENST00000453796 WDR11Q9BZH6 1224 aa16.9■□□□□ 0.3
HSPG2-207ENST00000453796 MAP3K20Q9NYL2 800 aaKnown RBP16.9■□□□□ 0.3
HSPG2-207ENST00000453796 B4DLN1 442 aa16.89■□□□□ 0.29
HSPG2-207ENST00000453796 DYNC1LI2O43237 492 aaPredicted RBP16.89■□□□□ 0.29
HSPG2-207ENST00000453796 PLEKHA8P1O95397 391 aa16.89■□□□□ 0.29
HSPG2-207ENST00000453796 CALM1P0DP23 149 aa16.89■□□□□ 0.29
HSPG2-207ENST00000453796 CALM2P0DP24 149 aa16.89■□□□□ 0.29
HSPG2-207ENST00000453796 CALM3P0DP25 149 aa16.89■□□□□ 0.29
HSPG2-207ENST00000453796 RXRAP19793 462 aa16.89■□□□□ 0.29
HSPG2-207ENST00000453796 HSPA4P34932 840 aa16.89■□□□□ 0.29
HSPG2-207ENST00000453796 CDK7P50613 346 aa16.89■□□□□ 0.29
HSPG2-207ENST00000453796 MRPL12P52815 198 aaKnown RBP16.89■□□□□ 0.29
HSPG2-207ENST00000453796 TRAF1Q13077 416 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms