RNA–Protein interactions for RNA: ENST00000452979.5

HERC3-207, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 3

Gene HERC3, Length 887 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-207ENST00000452979 DCAF4Q8WV16 495 aa13.8□□□□□ -0.2
HERC3-207ENST00000452979 CHMP4CQ96CF2 233 aa13.8□□□□□ -0.2
HERC3-207ENST00000452979 PURBQ96QR8 312 aaKnown RBP13.8□□□□□ -0.2
HERC3-207ENST00000452979 POLR3EQ9NVU0 708 aa13.8□□□□□ -0.2
HERC3-207ENST00000452979 CHD7Q9P2D1 2997 aa13.8□□□□□ -0.2
HERC3-207ENST00000452979 CCPG1Q9ULG6 757 aa13.8□□□□□ -0.2
HERC3-207ENST00000452979 SLC4A7Q9Y6M7 1214 aa13.8□□□□□ -0.2
HERC3-207ENST00000452979 REV3LO60673 3130 aa13.8□□□□□ -0.2
HERC3-207ENST00000452979 MYO9BQ13459 2157 aa13.79□□□□□ -0.2
HERC3-207ENST00000452979 ORC4O43929 436 aa13.79□□□□□ -0.2
HERC3-207ENST00000452979 POU3F3P20264 500 aaPredicted RBP13.79□□□□□ -0.2
HERC3-207ENST00000452979 COL9A1P20849 921 aa13.79□□□□□ -0.2
HERC3-207ENST00000452979 ALDH5A1P51649 535 aaPredicted RBP13.79□□□□□ -0.2
HERC3-207ENST00000452979 RABGGTBP53611 331 aa13.79□□□□□ -0.2
HERC3-207ENST00000452979 PURAQ00577 322 aaKnown RBP13.79□□□□□ -0.2
HERC3-207ENST00000452979 CTDSPL2Q05D32 466 aa13.79□□□□□ -0.2
HERC3-207ENST00000452979 BAATQ14032 418 aaPredicted RBP13.79□□□□□ -0.2
HERC3-207ENST00000452979 NSMFQ6X4W1 530 aa13.79□□□□□ -0.2
HERC3-207ENST00000452979 FSD1Q9BTV5 496 aa13.79□□□□□ -0.2
HERC3-207ENST00000452979 XIRP2A4UGR9 3374 aa13.79□□□□□ -0.2
HERC3-207ENST00000452979 CPT1AP50416 773 aa13.78□□□□□ -0.2
HERC3-207ENST00000452979 IRX6P78412 446 aaPredicted RBP13.78□□□□□ -0.2
HERC3-207ENST00000452979 ALX1Q15699 326 aa13.78□□□□□ -0.2
HERC3-207ENST00000452979 RASGRP2Q7LDG7 609 aa13.78□□□□□ -0.2
HERC3-207ENST00000452979 OTUD7AQ8TE49 926 aaPredicted RBP13.78□□□□□ -0.2
HERC3-207ENST00000452979 SCLYQ96I15 445 aa13.78□□□□□ -0.2
HERC3-207ENST00000452979 WDR11Q9BZH6 1224 aa13.78□□□□□ -0.2
HERC3-207ENST00000452979 SCN5AQ14524 2016 aa13.78□□□□□ -0.2
HERC3-207ENST00000452979 TRANK1O15050 2925 aa13.77□□□□□ -0.21
HERC3-207ENST00000452979 RANBP6O60518 1105 aaKnown RBP13.77□□□□□ -0.21
HERC3-207ENST00000452979 TNKSO95271 1327 aa13.77□□□□□ -0.21
HERC3-207ENST00000452979 MYOGP15173 224 aa13.77□□□□□ -0.21
HERC3-207ENST00000452979 ATP2A2P16615 1042 aaKnown RBP13.77□□□□□ -0.21
HERC3-207ENST00000452979 RFC2P35250 354 aa13.77□□□□□ -0.21
HERC3-207ENST00000452979 TTLL4Q14679 1199 aa13.77□□□□□ -0.21
HERC3-207ENST00000452979 PPP2R2DQ66LE6 453 aa13.77□□□□□ -0.21
HERC3-207ENST00000452979 TTBK2Q6IQ55 1244 aa13.77□□□□□ -0.21
HERC3-207ENST00000452979 CLEC4DQ8WXI8 215 aa13.77□□□□□ -0.21
HERC3-207ENST00000452979 CRBNQ96SW2 442 aa13.77□□□□□ -0.21
HERC3-207ENST00000452979 UHRF1Q96T88 793 aaPredicted RBP13.77□□□□□ -0.21
HERC3-207ENST00000452979 MTG1Q9BT17 334 aaPredicted RBP13.77□□□□□ -0.21
HERC3-207ENST00000452979 SALL3Q9BXA9 1300 aa13.77□□□□□ -0.21
HERC3-207ENST00000452979 TSPYL2Q9H2G4 693 aaPredicted RBP13.77□□□□□ -0.21
HERC3-207ENST00000452979 TCP11L1Q9NUJ3 509 aa13.77□□□□□ -0.21
HERC3-207ENST00000452979 TRMT13Q9NUP7 481 aaKnown RBP13.77□□□□□ -0.21
HERC3-207ENST00000452979 PNMA2Q9UL42 364 aa13.77□□□□□ -0.21
HERC3-207ENST00000452979 SCN10AQ9Y5Y9 1956 aa13.77□□□□□ -0.21
HERC3-207ENST00000452979 A6NJR5 290 aa13.76□□□□□ -0.21
HERC3-207ENST00000452979 NFIBO00712 420 aa13.76□□□□□ -0.21
HERC3-207ENST00000452979 KPNA6O60684 536 aa13.76□□□□□ -0.21
HERC3-207ENST00000452979 TOP1P11387 765 aaKnown RBP13.76□□□□□ -0.21
HERC3-207ENST00000452979 CYP2C9P11712 490 aa13.76□□□□□ -0.21
HERC3-207ENST00000452979 BMP1P13497 986 aa13.76□□□□□ -0.21
HERC3-207ENST00000452979 MX1P20591 662 aa13.76□□□□□ -0.21
HERC3-207ENST00000452979 SLC16A2P36021 539 aa13.76□□□□□ -0.21
HERC3-207ENST00000452979 PTPN11Q06124 597 aaPredicted RBP13.76□□□□□ -0.21
HERC3-207ENST00000452979 VPS53Q5VIR6 699 aa13.76□□□□□ -0.21
HERC3-207ENST00000452979 SYDE2Q5VT97 1194 aa13.76□□□□□ -0.21
HERC3-207ENST00000452979 NFRKBQ6P4R8 1299 aa13.76□□□□□ -0.21
HERC3-207ENST00000452979 PHOSPHO2Q8TCD6 241 aa13.76□□□□□ -0.21
HERC3-207ENST00000452979 TMEM47Q9BQJ4 181 aa13.76□□□□□ -0.21
HERC3-207ENST00000452979 PCDHB15Q9Y5E8 787 aa13.76□□□□□ -0.21
HERC3-207ENST00000452979 ZBBXA8MT70 800 aa13.75□□□□□ -0.21
HERC3-207ENST00000452979 PITPNM1O00562 1244 aa13.75□□□□□ -0.21
HERC3-207ENST00000452979 NKRFO15226 690 aaKnown RBP eCLIP13.75□□□□□ -0.21
HERC3-207ENST00000452979 MYL3P08590 195 aa13.75□□□□□ -0.21
HERC3-207ENST00000452979 EDNRBP24530 442 aa13.75□□□□□ -0.21
HERC3-207ENST00000452979 CCDC96Q2M329 555 aa13.75□□□□□ -0.21
HERC3-207ENST00000452979 NBPF20Q3BBV1 942 aa13.75□□□□□ -0.21
HERC3-207ENST00000452979 TMEM67Q5HYA8 995 aa13.75□□□□□ -0.21
HERC3-207ENST00000452979 RNF207Q6ZRF8 634 aa13.75□□□□□ -0.21
HERC3-207ENST00000452979 TICAM2Q86XR7 235 aa13.75□□□□□ -0.21
HERC3-207ENST00000452979 OR6J1Q8NGC5 347 aa13.75□□□□□ -0.21
HERC3-207ENST00000452979 TTC14Q96N46 770 aa13.75□□□□□ -0.21
HERC3-207ENST00000452979 GPHNQ9NQX3 736 aaPredicted RBP13.75□□□□□ -0.21
HERC3-207ENST00000452979 HELLSQ9NRZ9 838 aa13.75□□□□□ -0.21
HERC3-207ENST00000452979 MTCH2Q9Y6C9 303 aa13.75□□□□□ -0.21
HERC3-207ENST00000452979 TANC1Q9C0D5 1861 aa13.75□□□□□ -0.21
HERC3-207ENST00000452979 TCF20Q9UGU0 1960 aaKnown RBP13.74□□□□□ -0.21
HERC3-207ENST00000452979 FGAP02671 866 aa13.74□□□□□ -0.21
HERC3-207ENST00000452979 IQCF3P0C7M6 154 aa13.74□□□□□ -0.21
HERC3-207ENST00000452979 ACTN1P12814 892 aa13.74□□□□□ -0.21
HERC3-207ENST00000452979 AAK1Q2M2I8 961 aa13.74□□□□□ -0.21
HERC3-207ENST00000452979 BRDTQ58F21 947 aaPredicted RBP13.74□□□□□ -0.21
HERC3-207ENST00000452979 SLC30A10Q6XR72 485 aa13.74□□□□□ -0.21
HERC3-207ENST00000452979 DEFB128Q7Z7B8 93 aa13.74□□□□□ -0.21
HERC3-207ENST00000452979 RGS22Q8NE09 1264 aa13.74□□□□□ -0.21
HERC3-207ENST00000452979 IL27Q8NEV9 243 aa13.74□□□□□ -0.21
HERC3-207ENST00000452979 DNERQ8NFT8 737 aa13.74□□□□□ -0.21
HERC3-207ENST00000452979 SCFD2Q8WU76 684 aa13.74□□□□□ -0.21
HERC3-207ENST00000452979 EVI5LQ96CN4 794 aa13.74□□□□□ -0.21
HERC3-207ENST00000452979 SLC9A7Q96T83 725 aa13.74□□□□□ -0.21
HERC3-207ENST00000452979 MPHOSPH6Q99547 160 aaKnown RBP13.74□□□□□ -0.21
HERC3-207ENST00000452979 MAF1Q9H063 256 aa13.74□□□□□ -0.21
HERC3-207ENST00000452979 MTMR7Q9Y216 660 aa13.74□□□□□ -0.21
HERC3-207ENST00000452979 WDR19Q8NEZ3 1342 aa13.73□□□□□ -0.21
HERC3-207ENST00000452979 PTPDC1A2A3K4 754 aa13.73□□□□□ -0.21
HERC3-207ENST00000452979 CA3P07451 260 aa13.73□□□□□ -0.21
HERC3-207ENST00000452979 SNHG28P0DPA3 235 aa13.73□□□□□ -0.21
HERC3-207ENST00000452979 PDHBP11177 359 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms