RNA–Protein interactions for RNA: ENST00000451980.3

LINC01548-201, Transcript of long intergenic non-protein coding RNA 1548, humanhuman

TSL 5 BASIC

Gene LINC01548, Length 696 nt, Biotype lincRNA, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01548-201ENST00000451980 USP17L2Q6R6M4 530 aa9.66□□□□□ -0.86
LINC01548-201ENST00000451980 CDC37L1Q7L3B6 337 aa9.66□□□□□ -0.86
LINC01548-201ENST00000451980 CATIPQ7Z7H3 387 aa9.66□□□□□ -0.86
LINC01548-201ENST00000451980 TNPO1Q92973 898 aaKnown RBP9.66□□□□□ -0.86
LINC01548-201ENST00000451980 CHMP4CQ96CF2 233 aa9.66□□□□□ -0.86
LINC01548-201ENST00000451980 KAT14Q9H8E8 782 aa9.66□□□□□ -0.86
LINC01548-201ENST00000451980 KANSL2Q9H9L4 492 aa9.66□□□□□ -0.86
LINC01548-201ENST00000451980 DNMT3AQ9Y6K1 912 aaPredicted RBP9.66□□□□□ -0.86
LINC01548-201ENST00000451980 hCG_1642624A0A1W2PR95 340 aa9.65□□□□□ -0.86
LINC01548-201ENST00000451980 ADAMTS3O15072 1205 aa9.65□□□□□ -0.86
LINC01548-201ENST00000451980 STX6O43752 255 aa9.65□□□□□ -0.86
LINC01548-201ENST00000451980 GOLGA8HP0CJ92 632 aa9.65□□□□□ -0.86
LINC01548-201ENST00000451980 ICA1Q05084 483 aa9.65□□□□□ -0.86
LINC01548-201ENST00000451980 TTBK2Q6IQ55 1244 aa9.65□□□□□ -0.86
LINC01548-201ENST00000451980 CLEC17AQ6ZS10 378 aa9.65□□□□□ -0.86
LINC01548-201ENST00000451980 USP48Q86UV5 1035 aa9.65□□□□□ -0.86
LINC01548-201ENST00000451980 NANOS1Q8WY41 292 aaKnown RBP9.65□□□□□ -0.86
LINC01548-201ENST00000451980 KLRG1Q96E93 195 aa9.65□□□□□ -0.86
LINC01548-201ENST00000451980 TSEN34Q9BSV6 310 aaKnown RBP9.65□□□□□ -0.86
LINC01548-201ENST00000451980 NMRK2Q9NPI5 230 aa9.65□□□□□ -0.86
LINC01548-201ENST00000451980 ORC3Q9UBD5 711 aaPredicted RBP9.65□□□□□ -0.86
LINC01548-201ENST00000451980 TRPM7Q96QT4 1865 aa9.64□□□□□ -0.87
LINC01548-201ENST00000451980 FRMPD2Q68DX3 1309 aaPredicted RBP9.64□□□□□ -0.87
LINC01548-201ENST00000451980 PRPF3O43395 683 aaKnown RBP9.64□□□□□ -0.87
LINC01548-201ENST00000451980 NDUFB10O96000 172 aa9.64□□□□□ -0.87
LINC01548-201ENST00000451980 CALM1P0DP23 149 aa9.64□□□□□ -0.87
LINC01548-201ENST00000451980 CALM2P0DP24 149 aa9.64□□□□□ -0.87
LINC01548-201ENST00000451980 CALM3P0DP25 149 aa9.64□□□□□ -0.87
LINC01548-201ENST00000451980 HMGN5P82970 282 aaKnown RBP9.64□□□□□ -0.87
LINC01548-201ENST00000451980 ZNF543Q08ER8 600 aa9.64□□□□□ -0.87
LINC01548-201ENST00000451980 RESTQ13127 1097 aa9.64□□□□□ -0.87
LINC01548-201ENST00000451980 DGKZQ13574 1117 aa9.64□□□□□ -0.87
LINC01548-201ENST00000451980 PPP2R5BQ15173 497 aa9.64□□□□□ -0.87
LINC01548-201ENST00000451980 NPY5RQ15761 445 aa9.64□□□□□ -0.87
LINC01548-201ENST00000451980 FOXD4L5Q5VV16 416 aaPredicted RBP9.64□□□□□ -0.87
LINC01548-201ENST00000451980 ZNF385CQ66K41 422 aaPredicted RBP9.64□□□□□ -0.87
LINC01548-201ENST00000451980 PPP1R3FQ6ZSY5 799 aaPredicted RBP9.64□□□□□ -0.87
LINC01548-201ENST00000451980 MOB2Q70IA6 237 aa9.64□□□□□ -0.87
LINC01548-201ENST00000451980 BPHLQ86WA6 291 aaPredicted RBP9.64□□□□□ -0.87
LINC01548-201ENST00000451980 CCDC82Q8N4S0 544 aa9.64□□□□□ -0.87
LINC01548-201ENST00000451980 DDX55Q8NHQ9 600 aaKnown RBP eCLIP9.64□□□□□ -0.87
LINC01548-201ENST00000451980 FOXD4L4Q8WXT5 416 aaPredicted RBP9.64□□□□□ -0.87
LINC01548-201ENST00000451980 ZKSCAN4Q969J2 545 aaPredicted RBP9.64□□□□□ -0.87
LINC01548-201ENST00000451980 CDCA5Q96FF9 252 aa9.64□□□□□ -0.87
LINC01548-201ENST00000451980 SLC26A6Q9BXS9 759 aa9.64□□□□□ -0.87
LINC01548-201ENST00000451980 TRIM34Q9BYJ4 488 aa9.64□□□□□ -0.87
LINC01548-201ENST00000451980 ZNF341Q9BYN7 854 aa9.64□□□□□ -0.87
LINC01548-201ENST00000451980 RRAGCQ9HB90 399 aa9.64□□□□□ -0.87
LINC01548-201ENST00000451980 RBM28Q9NW13 759 aaKnown RBP9.64□□□□□ -0.87
LINC01548-201ENST00000451980 TMX2Q9Y320 296 aa9.64□□□□□ -0.87
LINC01548-201ENST00000451980 IQCA1LA6NCM1 817 aa9.63□□□□□ -0.87
LINC01548-201ENST00000451980 KIF28PB7ZC32 967 aa9.63□□□□□ -0.87
LINC01548-201ENST00000451980 KLRF2D3W0D1 207 aa9.63□□□□□ -0.87
LINC01548-201ENST00000451980 TRAF5O00463 557 aa9.63□□□□□ -0.87
LINC01548-201ENST00000451980 DHX16O60231 1041 aaKnown RBP9.63□□□□□ -0.87
LINC01548-201ENST00000451980 CTNND1O60716 968 aaKnown RBP9.63□□□□□ -0.87
LINC01548-201ENST00000451980 F13A1P00488 732 aa9.63□□□□□ -0.87
LINC01548-201ENST00000451980 F12P00748 615 aaPredicted RBP9.63□□□□□ -0.87
LINC01548-201ENST00000451980 ZSCAN22P10073 491 aaPredicted RBP9.63□□□□□ -0.87
LINC01548-201ENST00000451980 NUCB2P80303 420 aa9.63□□□□□ -0.87
LINC01548-201ENST00000451980 FOXK2Q01167 660 aa9.63□□□□□ -0.87
LINC01548-201ENST00000451980 NOL9Q5SY16 702 aaKnown RBP9.63□□□□□ -0.87
LINC01548-201ENST00000451980 LARP1BQ659C4 914 aaKnown RBP9.63□□□□□ -0.87
LINC01548-201ENST00000451980 SYNE3Q6ZMZ3 975 aa9.63□□□□□ -0.87
LINC01548-201ENST00000451980 KRT26Q7Z3Y9 468 aa9.63□□□□□ -0.87
LINC01548-201ENST00000451980 GMCL1P1Q8NEA9 526 aa9.63□□□□□ -0.87
LINC01548-201ENST00000451980 CTCFLQ8NI51 663 aaPredicted RBP9.63□□□□□ -0.87
LINC01548-201ENST00000451980 DCPSQ96C86 337 aaKnown RBP9.63□□□□□ -0.87
LINC01548-201ENST00000451980 MTMR8Q96EF0 704 aa9.63□□□□□ -0.87
LINC01548-201ENST00000451980 NUP88Q99567 741 aaPredicted RBP9.63□□□□□ -0.87
LINC01548-201ENST00000451980 COL25A1Q9BXS0 654 aaPredicted RBP9.63□□□□□ -0.87
LINC01548-201ENST00000451980 RNF26Q9BY78 433 aaPredicted RBP9.63□□□□□ -0.87
LINC01548-201ENST00000451980 UBA5Q9GZZ9 404 aa9.63□□□□□ -0.87
LINC01548-201ENST00000451980 RIOX1Q9H6W3 641 aa9.63□□□□□ -0.87
LINC01548-201ENST00000451980 MTMR7Q9Y216 660 aa9.63□□□□□ -0.87
LINC01548-201ENST00000451980 SNCAIPQ9Y6H5 919 aa9.63□□□□□ -0.87
LINC01548-201ENST00000451980 COL11A1P12107 1806 aaPredicted RBP9.63□□□□□ -0.87
LINC01548-201ENST00000451980 LOC285556D6RIA3 1793 aa9.63□□□□□ -0.87
LINC01548-201ENST00000451980 CCDC196A0A1B0GTZ2 297 aa9.62□□□□□ -0.87
LINC01548-201ENST00000451980 F5H6K3 240 aa9.62□□□□□ -0.87
LINC01548-201ENST00000451980 CPLX1O14810 134 aa9.62□□□□□ -0.87
LINC01548-201ENST00000451980 PPP1R11O60927 126 aaPredicted RBP9.62□□□□□ -0.87
LINC01548-201ENST00000451980 ASNSP08243 561 aa9.62□□□□□ -0.87
LINC01548-201ENST00000451980 PTPRAP18433 802 aa9.62□□□□□ -0.87
LINC01548-201ENST00000451980 SMARCA1P28370 1054 aa9.62□□□□□ -0.87
LINC01548-201ENST00000451980 ATP2B2Q01814 1243 aa9.62□□□□□ -0.87
LINC01548-201ENST00000451980 GUCY1B3Q02153 619 aa9.62□□□□□ -0.87
LINC01548-201ENST00000451980 KLRC3Q07444 240 aa9.62□□□□□ -0.87
LINC01548-201ENST00000451980 SSRP1Q08945 709 aaKnown RBP9.62□□□□□ -0.87
LINC01548-201ENST00000451980 MAP3K11Q16584 847 aa9.62□□□□□ -0.87
LINC01548-201ENST00000451980 EAPPQ56P03 285 aaPredicted RBP9.62□□□□□ -0.87
LINC01548-201ENST00000451980 DCAF15Q66K64 600 aa9.62□□□□□ -0.87
LINC01548-201ENST00000451980 MAP1SQ66K74 1059 aaPredicted RBP9.62□□□□□ -0.87
LINC01548-201ENST00000451980 SLFN13Q68D06 897 aa9.62□□□□□ -0.87
LINC01548-201ENST00000451980 FAM173BQ6P4H8 233 aa9.62□□□□□ -0.87
LINC01548-201ENST00000451980 SCYL3Q8IZE3 742 aa9.62□□□□□ -0.87
LINC01548-201ENST00000451980 SVOPQ8N4V2 548 aa9.62□□□□□ -0.87
LINC01548-201ENST00000451980 FBXO18Q8NFZ0 1043 aa9.62□□□□□ -0.87
LINC01548-201ENST00000451980 GMCL1Q96IK5 515 aa9.62□□□□□ -0.87
LINC01548-201ENST00000451980 WRNIP1Q96S55 665 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms