RNA–Protein interactions for RNA: ENST00000451893.5

C9orf3-208, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 514 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-208ENST00000451893 RALYLQ86SE5 291 aaKnown RBP25.24■■□□□ 1.63
C9orf3-208ENST00000451893 ENAHQ8N8S7 591 aaPredicted RBP25.24■■□□□ 1.63
C9orf3-208ENST00000451893 DDX49Q9Y6V7 483 aaKnown RBP25.24■■□□□ 1.63
C9orf3-208ENST00000451893 U3KPZ7 1027 aaPredicted RBP25.24■■□□□ 1.63
C9orf3-208ENST00000451893 LCTP09848 1927 aa25.24■■□□□ 1.63
C9orf3-208ENST00000451893 FPGSQ05932 587 aa25.23■■□□□ 1.63
C9orf3-208ENST00000451893 CCSAPQ6IQ19 270 aaPredicted RBP25.23■■□□□ 1.63
C9orf3-208ENST00000451893 ANKRD33Q7Z3H0 272 aa25.23■■□□□ 1.63
C9orf3-208ENST00000451893 CPVLQ9H3G5 476 aa25.23■■□□□ 1.63
C9orf3-208ENST00000451893 VAT1LQ9HCJ6 419 aa25.23■■□□□ 1.63
C9orf3-208ENST00000451893 PDGFCQ9NRA1 345 aa25.23■■□□□ 1.63
C9orf3-208ENST00000451893 LOC102724159A0A0B4J2E5 919 aa25.22■■□□□ 1.63
C9orf3-208ENST00000451893 ARVCFO00192 962 aa25.22■■□□□ 1.63
C9orf3-208ENST00000451893 KIAA0355O15063 1070 aa25.22■■□□□ 1.63
C9orf3-208ENST00000451893 CABYRO75952 493 aa25.22■■□□□ 1.63
C9orf3-208ENST00000451893 SMPD1P17405 629 aa25.22■■□□□ 1.63
C9orf3-208ENST00000451893 RPS6P62753 249 aaKnown RBP25.22■■□□□ 1.63
C9orf3-208ENST00000451893 PWP2Q15269 919 aaKnown RBP25.22■■□□□ 1.63
C9orf3-208ENST00000451893 SHHQ15465 462 aa25.22■■□□□ 1.63
C9orf3-208ENST00000451893 Q7L0L9 218 aa25.22■■□□□ 1.63
C9orf3-208ENST00000451893 ASTN1O14525 1302 aa25.21■■□□□ 1.63
C9orf3-208ENST00000451893 ABCB11O95342 1321 aa25.21■■□□□ 1.63
C9orf3-208ENST00000451893 FAAP100Q0VG06 881 aa25.21■■□□□ 1.63
C9orf3-208ENST00000451893 SART3Q15020 963 aaKnown RBP25.21■■□□□ 1.63
C9orf3-208ENST00000451893 BRDTQ58F21 947 aaPredicted RBP25.21■■□□□ 1.63
C9orf3-208ENST00000451893 CXCL17Q6UXB2 119 aa25.21■■□□□ 1.63
C9orf3-208ENST00000451893 ADGRF4Q8IZF3 695 aa25.21■■□□□ 1.63
C9orf3-208ENST00000451893 CLEC4DQ8WXI8 215 aa25.21■■□□□ 1.63
C9orf3-208ENST00000451893 RNPC3Q96LT9 517 aaKnown RBP25.21■■□□□ 1.63
C9orf3-208ENST00000451893 WDR11Q9BZH6 1224 aa25.21■■□□□ 1.63
C9orf3-208ENST00000451893 GNEQ9Y223 722 aaKnown RBP25.21■■□□□ 1.63
C9orf3-208ENST00000451893 RBM19Q9Y4C8 960 aaKnown RBP25.21■■□□□ 1.63
C9orf3-208ENST00000451893 CHMLP26374 656 aa25.2■■□□□ 1.62
C9orf3-208ENST00000451893 MCF2L2Q86YR7 1114 aa25.2■■□□□ 1.62
C9orf3-208ENST00000451893 DNERQ8NFT8 737 aa25.2■■□□□ 1.62
C9orf3-208ENST00000451893 ANKS1AQ92625 1134 aa25.2■■□□□ 1.62
C9orf3-208ENST00000451893 GPHNQ9NQX3 736 aaPredicted RBP25.2■■□□□ 1.62
C9orf3-208ENST00000451893 Q9Y3F1 56 aa25.2■■□□□ 1.62
C9orf3-208ENST00000451893 PPP2R5BQ15173 497 aa25.19■■□□□ 1.62
C9orf3-208ENST00000451893 C9orf50Q5SZB4 431 aa25.19■■□□□ 1.62
C9orf3-208ENST00000451893 ZNF697Q5TEC3 545 aa25.19■■□□□ 1.62
C9orf3-208ENST00000451893 TAPT1Q6NXT6 567 aa25.19■■□□□ 1.62
C9orf3-208ENST00000451893 FBXO11Q86XK2 927 aa25.19■■□□□ 1.62
C9orf3-208ENST00000451893 OR6J1Q8NGC5 347 aa25.19■■□□□ 1.62
C9orf3-208ENST00000451893 IL25Q9H293 177 aa25.19■■□□□ 1.62
C9orf3-208ENST00000451893 CPT1AP50416 773 aa25.18■■□□□ 1.62
C9orf3-208ENST00000451893 DUSP28Q4G0W2 176 aa25.18■■□□□ 1.62
C9orf3-208ENST00000451893 MORC4Q8TE76 937 aa25.18■■□□□ 1.62
C9orf3-208ENST00000451893 MRPL11Q9Y3B7 192 aaKnown RBP25.18■■□□□ 1.62
C9orf3-208ENST00000451893 SZT2Q5T011 3432 aa25.17■■□□□ 1.62
C9orf3-208ENST00000451893 IFIT3O14879 490 aaKnown RBP25.17■■□□□ 1.62
C9orf3-208ENST00000451893 TIMP1P01033 207 aa25.17■■□□□ 1.62
C9orf3-208ENST00000451893 ITGA7Q13683 1181 aa25.17■■□□□ 1.62
C9orf3-208ENST00000451893 QRICH1Q2TAL8 776 aa25.17■■□□□ 1.62
C9orf3-208ENST00000451893 TMEM199Q8N511 208 aa25.17■■□□□ 1.62
C9orf3-208ENST00000451893 NCOA7Q8NI08 942 aa25.17■■□□□ 1.62
C9orf3-208ENST00000451893 PPP1R12CQ9BZL4 782 aa25.17■■□□□ 1.62
C9orf3-208ENST00000451893 MYL3P08590 195 aa25.16■■□□□ 1.62
C9orf3-208ENST00000451893 ITGB8P26012 769 aa25.16■■□□□ 1.62
C9orf3-208ENST00000451893 PPIGQ13427 754 aaKnown RBP eCLIP25.16■■□□□ 1.622e-14■□□□□ 11.1
C9orf3-208ENST00000451893 SCFD2Q8WU76 684 aa25.16■■□□□ 1.62
C9orf3-208ENST00000451893 FAM161BQ96MY7 647 aa25.16■■□□□ 1.62
C9orf3-208ENST00000451893 POLR3EQ9NVU0 708 aa25.16■■□□□ 1.62
C9orf3-208ENST00000451893 KLRF2D3W0D1 207 aa25.15■■□□□ 1.62
C9orf3-208ENST00000451893 NKRFO15226 690 aaKnown RBP eCLIP25.15■■□□□ 1.629e-10■■■■■ 29
C9orf3-208ENST00000451893 CTAGE5O15320 804 aa25.15■■□□□ 1.62
C9orf3-208ENST00000451893 CDC45O75419 566 aa25.15■■□□□ 1.62
C9orf3-208ENST00000451893 CYP21A2P08686 494 aa25.15■■□□□ 1.62
C9orf3-208ENST00000451893 PTGS1P23219 599 aa25.15■■□□□ 1.62
C9orf3-208ENST00000451893 CDK7P50613 346 aa25.15■■□□□ 1.62
C9orf3-208ENST00000451893 NKX3-2P78367 333 aa25.15■■□□□ 1.62
C9orf3-208ENST00000451893 PTH1RQ03431 593 aa25.15■■□□□ 1.62
C9orf3-208ENST00000451893 WTAPQ15007 396 aa25.15■■□□□ 1.62
C9orf3-208ENST00000451893 CASC1Q6TDU7 716 aa25.15■■□□□ 1.62
C9orf3-208ENST00000451893 CYB5R4Q7L1T6 521 aa25.15■■□□□ 1.62
C9orf3-208ENST00000451893 RGS22Q8NE09 1264 aa25.15■■□□□ 1.62
C9orf3-208ENST00000451893 SEZ6LQ9BYH1 1024 aa25.15■■□□□ 1.62
C9orf3-208ENST00000451893 UPF2Q9HAU5 1272 aaKnown RBP25.15■■□□□ 1.62
C9orf3-208ENST00000451893 TTLL4Q14679 1199 aa25.14■■□□□ 1.62
C9orf3-208ENST00000451893 MFSD5Q6N075 450 aa25.14■■□□□ 1.62
C9orf3-208ENST00000451893 FAM126BQ8IXS8 530 aa25.14■■□□□ 1.62
C9orf3-208ENST00000451893 AMNQ9BXJ7 453 aa25.14■■□□□ 1.62
C9orf3-208ENST00000451893 TBX21Q9UL17 535 aa25.14■■□□□ 1.62
C9orf3-208ENST00000451893 SGSM2O43147 1006 aa25.13■■□□□ 1.61
C9orf3-208ENST00000451893 CFBP00751 764 aa25.13■■□□□ 1.61
C9orf3-208ENST00000451893 TXNP10599 105 aaKnown RBP25.13■■□□□ 1.61
C9orf3-208ENST00000451893 ARHGEF16Q5VV41 709 aa25.13■■□□□ 1.61
C9orf3-208ENST00000451893 HOMER1Q86YM7 354 aa25.13■■□□□ 1.61
C9orf3-208ENST00000451893 SLC17A8Q8NDX2 589 aa25.13■■□□□ 1.61
C9orf3-208ENST00000451893 NSUN6Q8TEA1 469 aaKnown RBP25.13■■□□□ 1.61
C9orf3-208ENST00000451893 MAF1Q9H063 256 aa25.13■■□□□ 1.61
C9orf3-208ENST00000451893 JMJD4Q9H9V9 463 aa25.13■■□□□ 1.61
C9orf3-208ENST00000451893 MTMR10Q9NXD2 777 aa25.13■■□□□ 1.61
C9orf3-208ENST00000451893 LAMA3Q16787 3333 aa25.12■■□□□ 1.61
C9orf3-208ENST00000451893 E7EWF7 191 aa25.12■■□□□ 1.61
C9orf3-208ENST00000451893 PSMC6P62333 389 aa25.12■■□□□ 1.61
C9orf3-208ENST00000451893 TRAF1Q13077 416 aa25.12■■□□□ 1.61
C9orf3-208ENST00000451893 FAM47CQ5HY64 1035 aa25.12■■□□□ 1.61
C9orf3-208ENST00000451893 TMEM63BQ5T3F8 832 aa25.12■■□□□ 1.61
C9orf3-208ENST00000451893 STAG2Q8N3U4 1231 aa25.12■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms