RNA–Protein interactions for RNA: ENST00000450932.2

SLF1-202, Transcript of SMC5-SMC6 complex localization factor 1, humanhuman

TSL 1 (best)

Gene SLF1, Length 2,318 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLF1-202ENST00000450932 GK5Q6ZS86 529 aa5.55□□□□□ -1.52
SLF1-202ENST00000450932 SUGP2Q8IX01 1082 aaKnown RBP eCLIP5.55□□□□□ -1.52
SLF1-202ENST00000450932 JDP2Q8WYK2 163 aa5.55□□□□□ -1.52
SLF1-202ENST00000450932 FAM46AQ96IP4 442 aaKnown RBP5.55□□□□□ -1.52
SLF1-202ENST00000450932 MYRFLQ96LU7 910 aa5.55□□□□□ -1.52
SLF1-202ENST00000450932 USP26Q9BXU7 913 aa5.55□□□□□ -1.52
SLF1-202ENST00000450932 RNF208Q9H0X6 261 aa5.55□□□□□ -1.52
SLF1-202ENST00000450932 CORINQ9Y5Q5 1042 aa5.55□□□□□ -1.52
SLF1-202ENST00000450932 COL11A2P13942 1736 aaPredicted RBP5.54□□□□□ -1.52
SLF1-202ENST00000450932 KLF4O43474 513 aa5.54□□□□□ -1.52
SLF1-202ENST00000450932 BMP3P12645 472 aa5.54□□□□□ -1.52
SLF1-202ENST00000450932 ALDH1B1P30837 517 aa5.54□□□□□ -1.52
SLF1-202ENST00000450932 IARSP41252 1262 aaKnown RBP5.54□□□□□ -1.52
SLF1-202ENST00000450932 PREPP48147 710 aa5.54□□□□□ -1.52
SLF1-202ENST00000450932 ST5P78524 1137 aa5.54□□□□□ -1.52
SLF1-202ENST00000450932 CLCQ05315 142 aa5.54□□□□□ -1.52
SLF1-202ENST00000450932 FBXW10Q5XX13 1052 aa5.54□□□□□ -1.52
SLF1-202ENST00000450932 ANKRD34AQ69YU3 496 aa5.54□□□□□ -1.52
SLF1-202ENST00000450932 INTS5Q6P9B9 1019 aaKnown RBP5.54□□□□□ -1.52
SLF1-202ENST00000450932 CDC37L1Q7L3B6 337 aa5.54□□□□□ -1.52
SLF1-202ENST00000450932 WDR89Q96FK6 387 aaPredicted RBP5.54□□□□□ -1.52
SLF1-202ENST00000450932 LTV1Q96GA3 475 aaPredicted RBP5.54□□□□□ -1.52
SLF1-202ENST00000450932 C7orf69Q9H7B7 122 aa5.54□□□□□ -1.52
SLF1-202ENST00000450932 BRMS1Q9HCU9 246 aa5.54□□□□□ -1.52
SLF1-202ENST00000450932 KCNQ5Q9NR82 932 aa5.54□□□□□ -1.52
SLF1-202ENST00000450932 KIF20BQ96Q89 1820 aa5.54□□□□□ -1.52
SLF1-202ENST00000450932 MRC1P22897 1456 aa5.54□□□□□ -1.52
SLF1-202ENST00000450932 SOX1O00570 391 aaPredicted RBP5.54□□□□□ -1.52
SLF1-202ENST00000450932 TGFB1P01137 390 aa5.54□□□□□ -1.52
SLF1-202ENST00000450932 SRGNP10124 158 aa5.54□□□□□ -1.52
SLF1-202ENST00000450932 SOX9P48436 509 aa5.54□□□□□ -1.52
SLF1-202ENST00000450932 NFIAQ12857 509 aa5.54□□□□□ -1.52
SLF1-202ENST00000450932 PLEKHO1Q53GL0 409 aaPredicted RBP5.54□□□□□ -1.52
SLF1-202ENST00000450932 CIAPIN1Q6FI81 312 aa5.54□□□□□ -1.52
SLF1-202ENST00000450932 RGMBQ6NW40 437 aa5.54□□□□□ -1.52
SLF1-202ENST00000450932 RELL1Q8IUW5 271 aa5.54□□□□□ -1.52
SLF1-202ENST00000450932 RNF186Q9NXI6 227 aa5.54□□□□□ -1.52
SLF1-202ENST00000450932 COL15A1P39059 1388 aa5.54□□□□□ -1.52
SLF1-202ENST00000450932 SMAD7O15105 426 aaKnown RBP5.53□□□□□ -1.52
SLF1-202ENST00000450932 PPM1GO15355 546 aaPredicted RBP5.53□□□□□ -1.52
SLF1-202ENST00000450932 GAS2O43903 313 aaKnown RBP5.53□□□□□ -1.52
SLF1-202ENST00000450932 MAP1SQ66K74 1059 aaPredicted RBP5.53□□□□□ -1.52
SLF1-202ENST00000450932 BEND4Q6ZU67 534 aa5.53□□□□□ -1.52
SLF1-202ENST00000450932 SUPT20HQ8NEM7 779 aa5.53□□□□□ -1.52
SLF1-202ENST00000450932 KRTAP4-8Q9BYQ9 185 aa5.53□□□□□ -1.52
SLF1-202ENST00000450932 POLR3KQ9Y2Y1 108 aaPredicted RBP5.53□□□□□ -1.52
SLF1-202ENST00000450932 MCM4P33991 863 aa5.53□□□□□ -1.52
SLF1-202ENST00000450932 RASA3Q14644 834 aa5.53□□□□□ -1.52
SLF1-202ENST00000450932 ARHGEF6Q15052 776 aa5.53□□□□□ -1.52
SLF1-202ENST00000450932 CLEC4GQ6UXB4 293 aa5.53□□□□□ -1.52
SLF1-202ENST00000450932 FAM20CQ8IXL6 584 aa5.53□□□□□ -1.52
SLF1-202ENST00000450932 C12orf50Q8NA57 414 aaPredicted RBP5.53□□□□□ -1.52
SLF1-202ENST00000450932 CBX8Q9HC52 389 aa5.53□□□□□ -1.52
SLF1-202ENST00000450932 SUPT16HQ9Y5B9 1047 aaKnown RBP5.53□□□□□ -1.52
SLF1-202ENST00000450932 SLX4Q8IY92 1834 aa5.52□□□□□ -1.53
SLF1-202ENST00000450932 SCN11AQ9UI33 1791 aa5.52□□□□□ -1.53
SLF1-202ENST00000450932 IBTKQ9P2D0 1353 aaPredicted RBP5.52□□□□□ -1.53
SLF1-202ENST00000450932 AOC2O75106 756 aa5.52□□□□□ -1.53
SLF1-202ENST00000450932 DLGAP3O95886 979 aa5.52□□□□□ -1.53
SLF1-202ENST00000450932 MMP14P50281 582 aa5.52□□□□□ -1.53
SLF1-202ENST00000450932 PCDH1Q08174 1060 aa5.52□□□□□ -1.53
SLF1-202ENST00000450932 INPP5AQ14642 412 aa5.52□□□□□ -1.53
SLF1-202ENST00000450932 ZYXQ15942 572 aaKnown RBP5.52□□□□□ -1.53
SLF1-202ENST00000450932 RNF43Q68DV7 783 aa5.52□□□□□ -1.53
SLF1-202ENST00000450932 PDZD3Q86UT5 571 aa5.52□□□□□ -1.53
SLF1-202ENST00000450932 C2orf69Q8N8R5 385 aa5.52□□□□□ -1.53
SLF1-202ENST00000450932 ZNF622Q969S3 477 aaKnown RBP eCLIP5.52□□□□□ -1.53
SLF1-202ENST00000450932 ARMC5Q96C12 935 aa5.52□□□□□ -1.53
SLF1-202ENST00000450932 CLEC4MQ9H2X3 399 aaPredicted RBP5.52□□□□□ -1.53
SLF1-202ENST00000450932 SNTG2Q9NY99 539 aa5.52□□□□□ -1.53
SLF1-202ENST00000450932 PPM1HQ9ULR3 514 aa5.52□□□□□ -1.53
SLF1-202ENST00000450932 ZNF609O15014 1411 aa5.52□□□□□ -1.53
SLF1-202ENST00000450932 SNED1Q8TER0 1413 aa5.52□□□□□ -1.53
SLF1-202ENST00000450932 KIF7Q2M1P5 1343 aa5.52□□□□□ -1.53
SLF1-202ENST00000450932 ZNF541Q9H0D2 1346 aa5.52□□□□□ -1.53
SLF1-202ENST00000450932 LAMB1P07942 1786 aa5.52□□□□□ -1.53
SLF1-202ENST00000450932 FAM155AB1AL88 458 aaPredicted RBP5.52□□□□□ -1.53
SLF1-202ENST00000450932 CELF2O95319 508 aaKnown RBP5.52□□□□□ -1.53
SLF1-202ENST00000450932 GSTM4Q03013 218 aa5.52□□□□□ -1.53
SLF1-202ENST00000450932 ZNF746Q6NUN9 644 aaPredicted RBP5.52□□□□□ -1.53
SLF1-202ENST00000450932 CLEC10AQ8IUN9 316 aa5.52□□□□□ -1.53
SLF1-202ENST00000450932 NT5C1AQ9BXI3 368 aa5.52□□□□□ -1.53
SLF1-202ENST00000450932 TMEM39AQ9NV64 488 aa5.52□□□□□ -1.53
SLF1-202ENST00000450932 SRP68Q9UHB9 627 aaKnown RBP5.52□□□□□ -1.53
SLF1-202ENST00000450932 HDAC9Q9UKV0 1011 aa5.52□□□□□ -1.53
SLF1-202ENST00000450932 COBLO75128 1261 aa5.51□□□□□ -1.53
SLF1-202ENST00000450932 MED26O95402 600 aa5.51□□□□□ -1.53
SLF1-202ENST00000450932 ESRRAP11474 423 aaPredicted RBP5.51□□□□□ -1.53
SLF1-202ENST00000450932 CD97P48960 835 aa5.51□□□□□ -1.53
SLF1-202ENST00000450932 PPP1R3FQ6ZSY5 799 aaPredicted RBP5.51□□□□□ -1.53
SLF1-202ENST00000450932 SULF2Q8IWU5 870 aa5.51□□□□□ -1.53
SLF1-202ENST00000450932 SRPK1Q96SB4 655 aaKnown RBP5.51□□□□□ -1.53
SLF1-202ENST00000450932 DBNDD2Q9BQY9 259 aa5.51□□□□□ -1.53
SLF1-202ENST00000450932 GPRC5DQ9NZD1 345 aa5.51□□□□□ -1.53
SLF1-202ENST00000450932 ROCK2O75116 1388 aaKnown RBP5.51□□□□□ -1.53
SLF1-202ENST00000450932 PAPPA2Q9BXP8 1791 aa5.51□□□□□ -1.53
SLF1-202ENST00000450932 TLDC2A0PJX2 215 aa5.51□□□□□ -1.53
SLF1-202ENST00000450932 B3GALT4O96024 378 aa5.51□□□□□ -1.53
SLF1-202ENST00000450932 CYP19A1P11511 503 aaPredicted RBP5.51□□□□□ -1.53
SLF1-202ENST00000450932 LMNB2Q03252 620 aa5.51□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms