RNA–Protein interactions for RNA: ENST00000450385.5

SGCE-208, Transcript of sarcoglycan epsilon, humanhuman

TSL 3

Gene SGCE, Length 815 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-208ENST00000450385 NOL8Q76FK4 1167 aaKnown RBP18.69■□□□□ 0.58
SGCE-208ENST00000450385 IWS1Q96ST2 819 aa18.69■□□□□ 0.58
SGCE-208ENST00000450385 PDLIM7Q9NR12 457 aa18.69■□□□□ 0.58
SGCE-208ENST00000450385 ASTN1O14525 1302 aa18.69■□□□□ 0.58
SGCE-208ENST00000450385 LTBP2Q14767 1821 aa18.68■□□□□ 0.58
SGCE-208ENST00000450385 A0A0U1RQG5 324 aaPredicted RBP18.68■□□□□ 0.58
SGCE-208ENST00000450385 PALM3A6NDB9 673 aaPredicted RBP18.68■□□□□ 0.58
SGCE-208ENST00000450385 E7EWF7 191 aa18.68■□□□□ 0.58
SGCE-208ENST00000450385 GOLGA8HP0CJ92 632 aa18.68■□□□□ 0.58
SGCE-208ENST00000450385 EDNRBP24530 442 aa18.68■□□□□ 0.58
SGCE-208ENST00000450385 MDM2Q00987 491 aaPredicted RBP18.68■□□□□ 0.58
SGCE-208ENST00000450385 CDC37Q16543 378 aaPredicted RBP18.68■□□□□ 0.58
SGCE-208ENST00000450385 BRDTQ58F21 947 aaPredicted RBP18.68■□□□□ 0.58
SGCE-208ENST00000450385 BMP2KLQ5H9B9 411 aa18.68■□□□□ 0.58
SGCE-208ENST00000450385 TLK2Q86UE8 772 aa18.68■□□□□ 0.58
SGCE-208ENST00000450385 FBXO11Q86XK2 927 aa18.68■□□□□ 0.58
SGCE-208ENST00000450385 MTMR8Q96EF0 704 aa18.68■□□□□ 0.58
SGCE-208ENST00000450385 UBA5Q9GZZ9 404 aa18.68■□□□□ 0.58
SGCE-208ENST00000450385 KLRF2D3W0D1 207 aa18.67■□□□□ 0.58
SGCE-208ENST00000450385 ARVCFO00192 962 aa18.67■□□□□ 0.58
SGCE-208ENST00000450385 IFIT3O14879 490 aaKnown RBP18.67■□□□□ 0.58
SGCE-208ENST00000450385 CTAGE5O15320 804 aa18.67■□□□□ 0.58
SGCE-208ENST00000450385 ADCY6O43306 1168 aa18.67■□□□□ 0.58
SGCE-208ENST00000450385 PDE4DQ08499 809 aa18.67■□□□□ 0.58
SGCE-208ENST00000450385 FSCN1Q16658 493 aaKnown RBP18.67■□□□□ 0.58
SGCE-208ENST00000450385 AMNQ9BXJ7 453 aa18.67■□□□□ 0.58
SGCE-208ENST00000450385 JMJD4Q9H9V9 463 aa18.67■□□□□ 0.58
SGCE-208ENST00000450385 LRRC37A2A6NM11 1700 aa18.66■□□□□ 0.58
SGCE-208ENST00000450385 TLR3O15455 904 aaKnown RBP18.66■□□□□ 0.58
SGCE-208ENST00000450385 KPNA6O60684 536 aa18.66■□□□□ 0.58
SGCE-208ENST00000450385 SMPD1P17405 629 aa18.66■□□□□ 0.58
SGCE-208ENST00000450385 CALML3P27482 149 aa18.66■□□□□ 0.58
SGCE-208ENST00000450385 SMARCA1P28370 1054 aa18.66■□□□□ 0.58
SGCE-208ENST00000450385 GHRHRQ02643 423 aa18.66■□□□□ 0.58
SGCE-208ENST00000450385 WTAPQ15007 396 aa18.66■□□□□ 0.58
SGCE-208ENST00000450385 CYB5R4Q7L1T6 521 aa18.66■□□□□ 0.58
SGCE-208ENST00000450385 SLC43A3Q8NBI5 491 aa18.66■□□□□ 0.58
SGCE-208ENST00000450385 NSUN6Q8TEA1 469 aaKnown RBP18.66■□□□□ 0.58
SGCE-208ENST00000450385 SCFD2Q8WU76 684 aa18.66■□□□□ 0.58
SGCE-208ENST00000450385 VTI1AQ96AJ9 217 aa18.66■□□□□ 0.58
SGCE-208ENST00000450385 LENG1Q96BZ8 264 aaPredicted RBP18.66■□□□□ 0.58
SGCE-208ENST00000450385 WDR11Q9BZH6 1224 aa18.66■□□□□ 0.58
SGCE-208ENST00000450385 PRDM5Q9NQX1 630 aaPredicted RBP18.66■□□□□ 0.58
SGCE-208ENST00000450385 TMEM39AQ9NV64 488 aa18.66■□□□□ 0.58
SGCE-208ENST00000450385 MAD2L2Q9UI95 211 aa18.66■□□□□ 0.58
SGCE-208ENST00000450385 TRIM43BA6NCK2 446 aa18.65■□□□□ 0.58
SGCE-208ENST00000450385 ZBTB5O15062 677 aa18.65■□□□□ 0.58
SGCE-208ENST00000450385 DYNC1LI2O43237 492 aaPredicted RBP18.65■□□□□ 0.58
SGCE-208ENST00000450385 DHX16O60231 1041 aaKnown RBP18.65■□□□□ 0.58
SGCE-208ENST00000450385 RAG1P15918 1043 aa18.65■□□□□ 0.58
SGCE-208ENST00000450385 CPT1AP50416 773 aa18.65■□□□□ 0.58
SGCE-208ENST00000450385 FAAP100Q0VG06 881 aa18.65■□□□□ 0.58
SGCE-208ENST00000450385 QRICH1Q2TAL8 776 aa18.65■□□□□ 0.58
SGCE-208ENST00000450385 FAM109BQ6ICB4 259 aaPredicted RBP18.65■□□□□ 0.58
SGCE-208ENST00000450385 CATIPQ7Z7H3 387 aa18.65■□□□□ 0.58
SGCE-208ENST00000450385 TRIM43Q96BQ3 446 aaPredicted RBP18.65■□□□□ 0.58
SGCE-208ENST00000450385 RIOX1Q9H6W3 641 aa18.65■□□□□ 0.58
SGCE-208ENST00000450385 POLR3EQ9NVU0 708 aa18.65■□□□□ 0.58
SGCE-208ENST00000450385 RBM8AQ9Y5S9 174 aaKnown RBP18.65■□□□□ 0.58
SGCE-208ENST00000450385 C11orf97A0A1B0GVM6 126 aaPredicted RBP18.64■□□□□ 0.57
SGCE-208ENST00000450385 MYADML2A6NDP7 307 aa18.64■□□□□ 0.57
SGCE-208ENST00000450385 PQBP1O60828 265 aaKnown RBP18.64■□□□□ 0.57
SGCE-208ENST00000450385 TROAPQ12815 778 aa18.64■□□□□ 0.57
SGCE-208ENST00000450385 GRM4Q14833 912 aa18.64■□□□□ 0.57
SGCE-208ENST00000450385 USH1GQ495M9 461 aa18.64■□□□□ 0.57
SGCE-208ENST00000450385 CASC1Q6TDU7 716 aa18.64■□□□□ 0.57
SGCE-208ENST00000450385 SLC30A10Q6XR72 485 aa18.64■□□□□ 0.57
SGCE-208ENST00000450385 FBXO16Q8IX29 292 aaPredicted RBP18.64■□□□□ 0.57
SGCE-208ENST00000450385 IGDCC4Q8TDY8 1250 aa18.64■□□□□ 0.57
SGCE-208ENST00000450385 TMEM87BQ96K49 555 aa18.64■□□□□ 0.57
SGCE-208ENST00000450385 LZTS2Q9BRK4 669 aa18.64■□□□□ 0.57
SGCE-208ENST00000450385 ESYT1Q9BSJ8 1104 aa18.64■□□□□ 0.57
SGCE-208ENST00000450385 KIAA1217Q5T5P2 1943 aa18.64■□□□□ 0.57
SGCE-208ENST00000450385 TIMP1P01033 207 aa18.63■□□□□ 0.57
SGCE-208ENST00000450385 MCM5P33992 734 aa18.63■□□□□ 0.57
SGCE-208ENST00000450385 TTLL4Q14679 1199 aa18.63■□□□□ 0.57
SGCE-208ENST00000450385 STXBP2Q15833 593 aa18.63■□□□□ 0.57
SGCE-208ENST00000450385 TMEM67Q5HYA8 995 aa18.63■□□□□ 0.57
SGCE-208ENST00000450385 RNF20Q5VTR2 975 aa18.63■□□□□ 0.57
SGCE-208ENST00000450385 STAG2Q8N3U4 1231 aa18.63■□□□□ 0.57
SGCE-208ENST00000450385 BADQ92934 168 aa18.63■□□□□ 0.57
SGCE-208ENST00000450385 VAT1LQ9HCJ6 419 aa18.63■□□□□ 0.57
SGCE-208ENST00000450385 PDGFCQ9NRA1 345 aa18.63■□□□□ 0.57
SGCE-208ENST00000450385 KIF5BP33176 963 aa18.62■□□□□ 0.57
SGCE-208ENST00000450385 LIFRP42702 1097 aa18.62■□□□□ 0.57
SGCE-208ENST00000450385 GNAQP50148 359 aa18.62■□□□□ 0.57
SGCE-208ENST00000450385 HSD17B4P51659 736 aa18.62■□□□□ 0.57
SGCE-208ENST00000450385 PPP2R5BQ15173 497 aa18.62■□□□□ 0.57
SGCE-208ENST00000450385 NECTIN1Q15223 517 aa18.62■□□□□ 0.57
SGCE-208ENST00000450385 EEPD1Q7L9B9 569 aa18.62■□□□□ 0.57
SGCE-208ENST00000450385 SH3RF1Q7Z6J0 888 aa18.62■□□□□ 0.57
SGCE-208ENST00000450385 MB21D2Q8IYB1 491 aaPredicted RBP18.62■□□□□ 0.57
SGCE-208ENST00000450385 SYTL5Q8TDW5 730 aaPredicted RBP18.62■□□□□ 0.57
SGCE-208ENST00000450385 RMDN3Q96TC7 470 aa18.62■□□□□ 0.57
SGCE-208ENST00000450385 LSG1Q9H089 658 aaKnown RBP18.62■□□□□ 0.57
SGCE-208ENST00000450385 TBX21Q9UL17 535 aa18.62■□□□□ 0.57
SGCE-208ENST00000450385 BAZ2BQ9UIF8 2168 aaKnown RBP18.62■□□□□ 0.57
SGCE-208ENST00000450385 PNMA6FA0A0J9YX94 578 aa18.61■□□□□ 0.57
SGCE-208ENST00000450385 SOX1O00570 391 aaPredicted RBP18.61■□□□□ 0.57
SGCE-208ENST00000450385 EIF3JO75822 258 aaKnown RBP18.61■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms