RNA–Protein interactions for RNA: ENST00000450000.5

CPSF7-208, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 574 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-208ENST00000450000 SHHQ15465 462 aa25.63■■□□□ 1.69
CPSF7-208ENST00000450000 CLEC4DQ8WXI8 215 aa25.63■■□□□ 1.69
CPSF7-208ENST00000450000 CPVLQ9H3G5 476 aa25.63■■□□□ 1.69
CPSF7-208ENST00000450000 GNEQ9Y223 722 aaKnown RBP25.63■■□□□ 1.69
CPSF7-208ENST00000450000 ASTN1O14525 1302 aa25.63■■□□□ 1.69
CPSF7-208ENST00000450000 CHMLP26374 656 aa25.62■■□□□ 1.69
CPSF7-208ENST00000450000 BRDTQ58F21 947 aaPredicted RBP25.62■■□□□ 1.69
CPSF7-208ENST00000450000 TAPT1Q6NXT6 567 aa25.62■■□□□ 1.69
CPSF7-208ENST00000450000 CXCL17Q6UXB2 119 aa25.62■■□□□ 1.69
CPSF7-208ENST00000450000 MCF2L2Q86YR7 1114 aa25.62■■□□□ 1.69
CPSF7-208ENST00000450000 ADGRF4Q8IZF3 695 aa25.62■■□□□ 1.69
CPSF7-208ENST00000450000 DNERQ8NFT8 737 aa25.62■■□□□ 1.69
CPSF7-208ENST00000450000 MORC4Q8TE76 937 aa25.62■■□□□ 1.69
CPSF7-208ENST00000450000 WDR11Q9BZH6 1224 aa25.62■■□□□ 1.69
CPSF7-208ENST00000450000 ABCB11O95342 1321 aa25.62■■□□□ 1.69
CPSF7-208ENST00000450000 SART3Q15020 963 aaKnown RBP25.61■■□□□ 1.69
CPSF7-208ENST00000450000 Q7L0L9 218 aa25.61■■□□□ 1.69
CPSF7-208ENST00000450000 GPHNQ9NQX3 736 aaPredicted RBP25.61■■□□□ 1.69
CPSF7-208ENST00000450000 NKX3-2P78367 333 aa25.6■■□□□ 1.69
CPSF7-208ENST00000450000 DUSP28Q4G0W2 176 aa25.6■■□□□ 1.69
CPSF7-208ENST00000450000 C9orf50Q5SZB4 431 aa25.6■■□□□ 1.69
CPSF7-208ENST00000450000 FBXO11Q86XK2 927 aa25.6■■□□□ 1.69
CPSF7-208ENST00000450000 RNPC3Q96LT9 517 aaKnown RBP25.6■■□□□ 1.69
CPSF7-208ENST00000450000 IL25Q9H293 177 aa25.6■■□□□ 1.69
CPSF7-208ENST00000450000 MRPL11Q9Y3B7 192 aaKnown RBP25.6■■□□□ 1.69
CPSF7-208ENST00000450000 IFIT3O14879 490 aaKnown RBP25.59■■□□□ 1.69
CPSF7-208ENST00000450000 TIMP1P01033 207 aa25.59■■□□□ 1.69
CPSF7-208ENST00000450000 CDK7P50613 346 aa25.59■■□□□ 1.69
CPSF7-208ENST00000450000 RGS22Q8NE09 1264 aa25.59■■□□□ 1.69
CPSF7-208ENST00000450000 SEZ6LQ9BYH1 1024 aa25.59■■□□□ 1.69
CPSF7-208ENST00000450000 CTAGE5O15320 804 aa25.58■■□□□ 1.69
CPSF7-208ENST00000450000 ITGB8P26012 769 aa25.58■■□□□ 1.69
CPSF7-208ENST00000450000 CPT1AP50416 773 aa25.58■■□□□ 1.69
CPSF7-208ENST00000450000 ITGA7Q13683 1181 aa25.58■■□□□ 1.69
CPSF7-208ENST00000450000 PPP2R5BQ15173 497 aa25.58■■□□□ 1.69
CPSF7-208ENST00000450000 ZNF697Q5TEC3 545 aa25.58■■□□□ 1.69
CPSF7-208ENST00000450000 TMEM199Q8N511 208 aa25.58■■□□□ 1.69
CPSF7-208ENST00000450000 OR6J1Q8NGC5 347 aa25.58■■□□□ 1.69
CPSF7-208ENST00000450000 NCOA7Q8NI08 942 aa25.58■■□□□ 1.69
CPSF7-208ENST00000450000 MAF1Q9H063 256 aa25.58■■□□□ 1.69
CPSF7-208ENST00000450000 POLR3EQ9NVU0 708 aa25.58■■□□□ 1.69
CPSF7-208ENST00000450000 NKRFO15226 690 aaKnown RBP eCLIP25.57■■□□□ 1.68
CPSF7-208ENST00000450000 PTH1RQ03431 593 aa25.57■■□□□ 1.68
CPSF7-208ENST00000450000 QRICH1Q2TAL8 776 aa25.57■■□□□ 1.68
CPSF7-208ENST00000450000 SCFD2Q8WU76 684 aa25.57■■□□□ 1.68
CPSF7-208ENST00000450000 MCM3APO60318 1980 aa25.56■■□□□ 1.68
CPSF7-208ENST00000450000 KLRF2D3W0D1 207 aa25.56■■□□□ 1.68
CPSF7-208ENST00000450000 MYL3P08590 195 aa25.56■■□□□ 1.68
CPSF7-208ENST00000450000 CYP21A2P08686 494 aa25.56■■□□□ 1.68
CPSF7-208ENST00000450000 PPIGQ13427 754 aaKnown RBP eCLIP25.56■■□□□ 1.689e-8■■■□□ 16.8
CPSF7-208ENST00000450000 CYB5R4Q7L1T6 521 aa25.56■■□□□ 1.68
CPSF7-208ENST00000450000 FAM126BQ8IXS8 530 aa25.56■■□□□ 1.68
CPSF7-208ENST00000450000 AMNQ9BXJ7 453 aa25.56■■□□□ 1.68
CPSF7-208ENST00000450000 PPP1R12CQ9BZL4 782 aa25.56■■□□□ 1.68
CPSF7-208ENST00000450000 JMJD4Q9H9V9 463 aa25.56■■□□□ 1.68
CPSF7-208ENST00000450000 TBX21Q9UL17 535 aa25.56■■□□□ 1.68
CPSF7-208ENST00000450000 SGSM2O43147 1006 aa25.55■■□□□ 1.68
CPSF7-208ENST00000450000 TRAF1Q13077 416 aa25.55■■□□□ 1.68
CPSF7-208ENST00000450000 TTLL4Q14679 1199 aa25.55■■□□□ 1.68
CPSF7-208ENST00000450000 WTAPQ15007 396 aa25.55■■□□□ 1.68
CPSF7-208ENST00000450000 MFSD5Q6N075 450 aa25.55■■□□□ 1.68
CPSF7-208ENST00000450000 NSUN6Q8TEA1 469 aaKnown RBP25.55■■□□□ 1.68
CPSF7-208ENST00000450000 MTMR10Q9NXD2 777 aa25.55■■□□□ 1.68
CPSF7-208ENST00000450000 LAMA4Q16363 1823 aa25.55■■□□□ 1.68
CPSF7-208ENST00000450000 TXNP10599 105 aaKnown RBP25.54■■□□□ 1.68
CPSF7-208ENST00000450000 PTGS1P23219 599 aa25.54■■□□□ 1.68
CPSF7-208ENST00000450000 SEC23AQ15436 765 aa25.54■■□□□ 1.68
CPSF7-208ENST00000450000 TMEM63BQ5T3F8 832 aa25.54■■□□□ 1.68
CPSF7-208ENST00000450000 ARHGEF16Q5VV41 709 aa25.54■■□□□ 1.68
CPSF7-208ENST00000450000 FAM109BQ6ICB4 259 aaPredicted RBP25.54■■□□□ 1.68
CPSF7-208ENST00000450000 FAM161BQ96MY7 647 aa25.54■■□□□ 1.68
CPSF7-208ENST00000450000 RBM47A0AV96 593 aaKnown RBP25.53■■□□□ 1.68
CPSF7-208ENST00000450000 E7EWF7 191 aa25.53■■□□□ 1.68
CPSF7-208ENST00000450000 CFBP00751 764 aa25.53■■□□□ 1.68
CPSF7-208ENST00000450000 PSMC6P62333 389 aa25.53■■□□□ 1.68
CPSF7-208ENST00000450000 SMAD3P84022 425 aaKnown RBP25.53■■□□□ 1.68
CPSF7-208ENST00000450000 CATIPQ7Z7H3 387 aa25.53■■□□□ 1.68
CPSF7-208ENST00000450000 STAG2Q8N3U4 1231 aa25.53■■□□□ 1.68
CPSF7-208ENST00000450000 SLC17A8Q8NDX2 589 aa25.53■■□□□ 1.68
CPSF7-208ENST00000450000 RMDN3Q96TC7 470 aa25.53■■□□□ 1.68
CPSF7-208ENST00000450000 LTBP2Q14767 1821 aa25.52■■□□□ 1.68
CPSF7-208ENST00000450000 EDNRBP24530 442 aa25.52■■□□□ 1.68
CPSF7-208ENST00000450000 STXBP2Q15833 593 aa25.52■■□□□ 1.68
CPSF7-208ENST00000450000 TMEM67Q5HYA8 995 aa25.52■■□□□ 1.68
CPSF7-208ENST00000450000 HOMER1Q86YM7 354 aa25.52■■□□□ 1.68
CPSF7-208ENST00000450000 SYTL5Q8TDW5 730 aaPredicted RBP25.52■■□□□ 1.68
CPSF7-208ENST00000450000 TAAR1Q96RJ0 339 aa25.52■■□□□ 1.68
CPSF7-208ENST00000450000 IWS1Q96ST2 819 aa25.52■■□□□ 1.68
CPSF7-208ENST00000450000 MTG1Q9BT17 334 aaPredicted RBP25.52■■□□□ 1.68
CPSF7-208ENST00000450000 STXBP5LQ9Y2K9 1186 aa25.52■■□□□ 1.68
CPSF7-208ENST00000450000 KPNA6O60684 536 aa25.51■■□□□ 1.67
CPSF7-208ENST00000450000 EPHB4P54760 987 aa25.51■■□□□ 1.67
CPSF7-208ENST00000450000 FAM47CQ5HY64 1035 aa25.51■■□□□ 1.67
CPSF7-208ENST00000450000 CASC1Q6TDU7 716 aa25.51■■□□□ 1.67
CPSF7-208ENST00000450000 SEPT14Q6ZU15 432 aa25.51■■□□□ 1.67
CPSF7-208ENST00000450000 TBC1D5Q92609 795 aa25.51■■□□□ 1.67
CPSF7-208ENST00000450000 HIPK3Q9H422 1215 aa25.51■■□□□ 1.67
CPSF7-208ENST00000450000 MAD2L2Q9UI95 211 aa25.51■■□□□ 1.67
CPSF7-208ENST00000450000 ZBTB5O15062 677 aa25.5■■□□□ 1.67
CPSF7-208ENST00000450000 CD4P01730 458 aa25.5■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 78.7 ms