RNA–Protein interactions for RNA: ENST00000449193.6

SKIDA1-202, Transcript of SKI/DACH domain containing 1, humanhuman

APPRIS P2 TSL 3 BASIC

Gene SKIDA1, Length 6,598 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKIDA1-202ENST00000449193 RSRC2Q7L4I2 434 aaKnown RBP19.38■□□□□ 0.69
SKIDA1-202ENST00000449193 NPHP4O75161 1426 aaPredicted RBP19.38■□□□□ 0.69
SKIDA1-202ENST00000449193 TRAPPC10P48553 1259 aa19.38■□□□□ 0.69
SKIDA1-202ENST00000449193 ERFEQ4G0M1 354 aa19.38■□□□□ 0.69
SKIDA1-202ENST00000449193 RNF40O75150 1001 aa19.38■□□□□ 0.69
SKIDA1-202ENST00000449193 BFSP1Q12934 665 aa19.38■□□□□ 0.69
SKIDA1-202ENST00000449193 DALRD3Q5D0E6 543 aaKnown RBP19.38■□□□□ 0.69
SKIDA1-202ENST00000449193 GJA10Q969M2 543 aa19.38■□□□□ 0.69
SKIDA1-202ENST00000449193 PCDHA4Q9UN74 947 aa19.38■□□□□ 0.69
SKIDA1-202ENST00000449193 INO80B-WBP1J3KQ70 363 aa19.38■□□□□ 0.69
SKIDA1-202ENST00000449193 BRD1O95696 1058 aa19.38■□□□□ 0.69
SKIDA1-202ENST00000449193 GCFC2P16383 781 aaKnown RBP19.38■□□□□ 0.69
SKIDA1-202ENST00000449193 RNASELQ05823 741 aaKnown RBP19.38■□□□□ 0.69
SKIDA1-202ENST00000449193 BBOF1Q8ND07 529 aa19.38■□□□□ 0.69
SKIDA1-202ENST00000449193 CACTINQ8WUQ7 758 aaKnown RBP19.38■□□□□ 0.69
SKIDA1-202ENST00000449193 INO80BQ9C086 356 aaPredicted RBP19.38■□□□□ 0.69
SKIDA1-202ENST00000449193 TPCN1Q9ULQ1 816 aa19.38■□□□□ 0.69
SKIDA1-202ENST00000449193 STX2P32856 288 aa19.38■□□□□ 0.69
SKIDA1-202ENST00000449193 SERPINB13Q9UIV8 391 aa19.38■□□□□ 0.69
SKIDA1-202ENST00000449193 BMP3P12645 472 aa19.37■□□□□ 0.69
SKIDA1-202ENST00000449193 ADORA1P30542 326 aa19.37■□□□□ 0.69
SKIDA1-202ENST00000449193 SEPT6Q14141 434 aa19.37■□□□□ 0.69
SKIDA1-202ENST00000449193 SNX25Q9H3E2 840 aa19.37■□□□□ 0.69
SKIDA1-202ENST00000449193 CFAP74Q9C0B2 1584 aa19.37■□□□□ 0.69
SKIDA1-202ENST00000449193 LMNB1P20700 586 aa19.37■□□□□ 0.69
SKIDA1-202ENST00000449193 WHAMMP3Q1A5X7 153 aa19.37■□□□□ 0.69
SKIDA1-202ENST00000449193 SYMPKQ92797 1274 aaKnown RBP19.37■□□□□ 0.69
SKIDA1-202ENST00000449193 SYNJ2BP-COX16A0A087WUM0 186 aa19.37■□□□□ 0.69
SKIDA1-202ENST00000449193 EXOC3L4Q17RC7 722 aa19.37■□□□□ 0.69
SKIDA1-202ENST00000449193 COX16Q9P0S2 106 aa19.37■□□□□ 0.69
SKIDA1-202ENST00000449193 CABS1Q96KC9 395 aa19.37■□□□□ 0.69
SKIDA1-202ENST00000449193 PCDHB4Q9Y5E5 795 aa19.37■□□□□ 0.69
SKIDA1-202ENST00000449193 GARSP41250 739 aaKnown RBP19.37■□□□□ 0.69
SKIDA1-202ENST00000449193 SCYL1Q96KG9 808 aa19.37■□□□□ 0.69
SKIDA1-202ENST00000449193 PUS3Q9BZE2 481 aaKnown RBP19.37■□□□□ 0.69
SKIDA1-202ENST00000449193 ANAPC5Q9UJX4 755 aa19.37■□□□□ 0.69
SKIDA1-202ENST00000449193 PLEKHG1Q9ULL1 1385 aa19.37■□□□□ 0.69
SKIDA1-202ENST00000449193 KIAA1841Q6NSI8 718 aa19.36■□□□□ 0.69
SKIDA1-202ENST00000449193 KCTD1Q719H9 257 aa19.36■□□□□ 0.69
SKIDA1-202ENST00000449193 LMNTD2Q8IXW0 634 aa19.36■□□□□ 0.69
SKIDA1-202ENST00000449193 RNF26Q9BY78 433 aaPredicted RBP19.36■□□□□ 0.69
SKIDA1-202ENST00000449193 ZNF215Q9UL58 517 aaPredicted RBP19.36■□□□□ 0.69
SKIDA1-202ENST00000449193 FAM170AA1A519 330 aa19.36■□□□□ 0.69
SKIDA1-202ENST00000449193 HGSO14964 777 aaPredicted RBP19.36■□□□□ 0.69
SKIDA1-202ENST00000449193 STAT2P52630 851 aa19.36■□□□□ 0.69
SKIDA1-202ENST00000449193 FAM81BQ96LP2 452 aa19.36■□□□□ 0.69
SKIDA1-202ENST00000449193 AK8Q96MA6 479 aa19.36■□□□□ 0.69
SKIDA1-202ENST00000449193 ACCSQ96QU6 501 aa19.36■□□□□ 0.69
SKIDA1-202ENST00000449193 TRIM56Q9BRZ2 755 aaKnown RBP19.36■□□□□ 0.69
SKIDA1-202ENST00000449193 KMT5AQ9NQR1 393 aa19.36■□□□□ 0.69
SKIDA1-202ENST00000449193 GSTA1P08263 222 aa19.36■□□□□ 0.69
SKIDA1-202ENST00000449193 GSTA2P09210 222 aa19.36■□□□□ 0.69
SKIDA1-202ENST00000449193 PDIA3P30101 505 aaKnown RBP19.36■□□□□ 0.69
SKIDA1-202ENST00000449193 PCK1P35558 622 aa19.36■□□□□ 0.69
SKIDA1-202ENST00000449193 SPATA1Q5VX52 437 aa19.36■□□□□ 0.69
SKIDA1-202ENST00000449193 RTKN2Q8IZC4 609 aa19.36■□□□□ 0.69
SKIDA1-202ENST00000449193 DTNBO60941 627 aa19.36■□□□□ 0.69
SKIDA1-202ENST00000449193 DDX55Q8NHQ9 600 aaKnown RBP eCLIP19.36■□□□□ 0.69
SKIDA1-202ENST00000449193 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP19.36■□□□□ 0.69
SKIDA1-202ENST00000449193 GDF11O95390 407 aa19.36■□□□□ 0.69
SKIDA1-202ENST00000449193 ZMYM1Q5SVZ6 1142 aa19.36■□□□□ 0.69
SKIDA1-202ENST00000449193 ARHGEF25Q86VW2 580 aa19.36■□□□□ 0.69
SKIDA1-202ENST00000449193 SLC12A6Q9UHW9 1150 aa19.35■□□□□ 0.69
SKIDA1-202ENST00000449193 PPFIA4O75335 1185 aa19.35■□□□□ 0.69
SKIDA1-202ENST00000449193 ANKRD42Q8N9B4 389 aa19.35■□□□□ 0.69
SKIDA1-202ENST00000449193 SKA2Q8WVK7 121 aaPredicted RBP19.35■□□□□ 0.69
SKIDA1-202ENST00000449193 LARP4BQ92615 738 aaKnown RBP19.35■□□□□ 0.69
SKIDA1-202ENST00000449193 CDKL2Q92772 493 aa19.35■□□□□ 0.69
SKIDA1-202ENST00000449193 TRIM11Q96F44 468 aa19.35■□□□□ 0.69
SKIDA1-202ENST00000449193 BZW2Q9Y6E2 419 aaKnown RBP19.35■□□□□ 0.69
SKIDA1-202ENST00000449193 ABT1Q9ULW3 272 aaKnown RBP19.35■□□□□ 0.69
SKIDA1-202ENST00000449193 H7C0C1 242 aa19.35■□□□□ 0.69
SKIDA1-202ENST00000449193 CTNNA1P35221 906 aaKnown RBP19.35■□□□□ 0.69
SKIDA1-202ENST00000449193 ATP5OP48047 213 aa19.35■□□□□ 0.69
SKIDA1-202ENST00000449193 UBXN2AP68543 259 aa19.35■□□□□ 0.69
SKIDA1-202ENST00000449193 POTEDQ86YR6 584 aa19.35■□□□□ 0.69
SKIDA1-202ENST00000449193 NCAPGQ9BPX3 1015 aa19.35■□□□□ 0.69
SKIDA1-202ENST00000449193 PI4KBQ9UBF8 816 aa19.35■□□□□ 0.69
SKIDA1-202ENST00000449193 ZNF233A6NK53 670 aa19.35■□□□□ 0.69
SKIDA1-202ENST00000449193 RAD17O75943 681 aa19.35■□□□□ 0.69
SKIDA1-202ENST00000449193 SRGAP2BP0DMP2 458 aa19.35■□□□□ 0.69
SKIDA1-202ENST00000449193 SH2D4BQ5SQS7 431 aa19.35■□□□□ 0.69
SKIDA1-202ENST00000449193 FOXP1Q9H334 677 aaPredicted RBP19.35■□□□□ 0.69
SKIDA1-202ENST00000449193 KDM5AP29375 1690 aaKnown RBP19.35■□□□□ 0.69
SKIDA1-202ENST00000449193 ERVV-1B6SEH8 477 aa19.35■□□□□ 0.69
SKIDA1-202ENST00000449193 NPR1P16066 1061 aa19.35■□□□□ 0.69
SKIDA1-202ENST00000449193 RBM6P78332 1123 aaKnown RBP19.35■□□□□ 0.69
SKIDA1-202ENST00000449193 CIAPIN1Q6FI81 312 aa19.35■□□□□ 0.69
SKIDA1-202ENST00000449193 CCDC13Q8IYE1 715 aa19.35■□□□□ 0.69
SKIDA1-202ENST00000449193 LMBRD1Q9NUN5 540 aa19.35■□□□□ 0.69
SKIDA1-202ENST00000449193 S100BP04271 92 aaPredicted RBP19.34■□□□□ 0.69
SKIDA1-202ENST00000449193 ATF2P15336 505 aa19.34■□□□□ 0.69
SKIDA1-202ENST00000449193 PSMC2P35998 433 aaKnown RBP19.34■□□□□ 0.69
SKIDA1-202ENST00000449193 RASSF2P50749 326 aa19.34■□□□□ 0.69
SKIDA1-202ENST00000449193 RBBP5Q15291 538 aaKnown RBP19.34■□□□□ 0.69
SKIDA1-202ENST00000449193 PHLDB2Q86SQ0 1253 aa19.34■□□□□ 0.69
SKIDA1-202ENST00000449193 ATP8B3O60423 1300 aa19.34■□□□□ 0.69
SKIDA1-202ENST00000449193 ELF2Q15723 593 aa19.34■□□□□ 0.69
SKIDA1-202ENST00000449193 RIPOR2Q9Y4F9 1068 aa19.34■□□□□ 0.69
SKIDA1-202ENST00000449193 TSNAXIP1Q2TAA8 658 aa19.34■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms