RNA–Protein interactions for RNA: ENST00000448656.5

CCDC148-205, Transcript of coiled-coil domain containing 148, humanhuman

TSL 1 (best)

Gene CCDC148, Length 1,786 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC148-205ENST00000448656 ELP3Q9H9T3 547 aa13.45□□□□□ -0.26
CCDC148-205ENST00000448656 PPP1R9AQ9ULJ8 1098 aa13.45□□□□□ -0.26
CCDC148-205ENST00000448656 GCOM1H8Y6P7 765 aaPredicted RBP13.44□□□□□ -0.26
CCDC148-205ENST00000448656 POLR2DO15514 142 aaKnown RBP13.44□□□□□ -0.26
CCDC148-205ENST00000448656 ICAM1P05362 532 aa13.44□□□□□ -0.26
CCDC148-205ENST00000448656 POLR2MP0CAP2 368 aa13.44□□□□□ -0.26
CCDC148-205ENST00000448656 FDX1P10109 184 aa13.44□□□□□ -0.26
CCDC148-205ENST00000448656 LONP1P36776 959 aaKnown RBP13.44□□□□□ -0.26
CCDC148-205ENST00000448656 TXLNAP40222 546 aa13.44□□□□□ -0.26
CCDC148-205ENST00000448656 ZRSR1Q15695 479 aaKnown RBP13.44□□□□□ -0.26
CCDC148-205ENST00000448656 PDILTQ8N807 584 aa13.44□□□□□ -0.26
CCDC148-205ENST00000448656 SYMPKQ92797 1274 aaKnown RBP13.44□□□□□ -0.26
CCDC148-205ENST00000448656 CCDC34Q96HJ3 373 aa13.44□□□□□ -0.26
CCDC148-205ENST00000448656 TMEM60Q9H2L4 133 aa13.44□□□□□ -0.26
CCDC148-205ENST00000448656 RRAGCQ9HB90 399 aa13.44□□□□□ -0.26
CCDC148-205ENST00000448656 HOOK1Q9UJC3 728 aaKnown RBP13.44□□□□□ -0.26
CCDC148-205ENST00000448656 SCN4AP35499 1836 aa13.44□□□□□ -0.26
CCDC148-205ENST00000448656 TDP2O95551 362 aa13.43□□□□□ -0.26
CCDC148-205ENST00000448656 HOXA13P31271 388 aaPredicted RBP13.43□□□□□ -0.26
CCDC148-205ENST00000448656 PRPHP41219 470 aa13.43□□□□□ -0.26
CCDC148-205ENST00000448656 CALCRLQ16602 461 aa13.43□□□□□ -0.26
CCDC148-205ENST00000448656 RBM43Q6ZSC3 357 aaKnown RBP13.43□□□□□ -0.26
CCDC148-205ENST00000448656 MOB2Q70IA6 237 aa13.43□□□□□ -0.26
CCDC148-205ENST00000448656 FCHSD1Q86WN1 690 aa13.43□□□□□ -0.26
CCDC148-205ENST00000448656 RNF214Q8ND24 703 aa13.43□□□□□ -0.26
CCDC148-205ENST00000448656 EPSTI1Q96J88 318 aa13.43□□□□□ -0.26
CCDC148-205ENST00000448656 AGBL1Q96MI9 1066 aa13.43□□□□□ -0.26
CCDC148-205ENST00000448656 ZNF408Q9H9D4 720 aa13.43□□□□□ -0.26
CCDC148-205ENST00000448656 SLC38A10Q9HBR0 1119 aa13.43□□□□□ -0.26
CCDC148-205ENST00000448656 RAVER2Q9HCJ3 691 aaKnown RBP13.43□□□□□ -0.26
CCDC148-205ENST00000448656 ALAS1P13196 640 aa13.43□□□□□ -0.26
CCDC148-205ENST00000448656 GCFC2P16383 781 aaKnown RBP13.43□□□□□ -0.26
CCDC148-205ENST00000448656 TYRO3Q06418 890 aa13.43□□□□□ -0.26
CCDC148-205ENST00000448656 MAP1SQ66K74 1059 aaPredicted RBP13.43□□□□□ -0.26
CCDC148-205ENST00000448656 PPP4R3AQ6IN85 833 aa13.43□□□□□ -0.26
CCDC148-205ENST00000448656 KRBA2Q6ZNG9 492 aa13.43□□□□□ -0.26
CCDC148-205ENST00000448656 USP49Q70CQ1 688 aa13.43□□□□□ -0.26
CCDC148-205ENST00000448656 ERO1BQ86YB8 467 aa13.43□□□□□ -0.26
CCDC148-205ENST00000448656 TEX2Q8IWB9 1127 aa13.43□□□□□ -0.26
CCDC148-205ENST00000448656 RASSF8Q8NHQ8 419 aa13.43□□□□□ -0.26
CCDC148-205ENST00000448656 ATG4CQ96DT6 458 aa13.43□□□□□ -0.26
CCDC148-205ENST00000448656 OTUD5Q96G74 571 aa13.43□□□□□ -0.26
CCDC148-205ENST00000448656 RBSNQ9H1K0 784 aa13.43□□□□□ -0.26
CCDC148-205ENST00000448656 EHMT1Q9H9B1 1298 aa13.43□□□□□ -0.26
CCDC148-205ENST00000448656 DDX25Q9UHL0 483 aaKnown RBP13.43□□□□□ -0.26
CCDC148-205ENST00000448656 PNMA2Q9UL42 364 aa13.43□□□□□ -0.26
CCDC148-205ENST00000448656 PIK3CDO00329 1044 aa13.42□□□□□ -0.26
CCDC148-205ENST00000448656 OPLAHO14841 1288 aa13.42□□□□□ -0.26
CCDC148-205ENST00000448656 POTEIP0CG38 1075 aa13.42□□□□□ -0.26
CCDC148-205ENST00000448656 POTEJP0CG39 1038 aa13.42□□□□□ -0.26
CCDC148-205ENST00000448656 TXKP42681 527 aa13.42□□□□□ -0.26
CCDC148-205ENST00000448656 USP11P51784 963 aa13.42□□□□□ -0.26
CCDC148-205ENST00000448656 PPATQ06203 517 aa13.42□□□□□ -0.26
CCDC148-205ENST00000448656 COG2Q14746 738 aa13.42□□□□□ -0.26
CCDC148-205ENST00000448656 IL17AQ16552 155 aa13.42□□□□□ -0.26
CCDC148-205ENST00000448656 TMEM266Q2M3C6 531 aa13.42□□□□□ -0.26
CCDC148-205ENST00000448656 LONRF3Q496Y0 759 aa13.42□□□□□ -0.26
CCDC148-205ENST00000448656 SH3D19Q5HYK7 790 aa13.42□□□□□ -0.26
CCDC148-205ENST00000448656 CATSPERGQ6ZRH7 1159 aa13.42□□□□□ -0.26
CCDC148-205ENST00000448656 MCF2L2Q86YR7 1114 aa13.42□□□□□ -0.26
CCDC148-205ENST00000448656 DHX58Q96C10 678 aa13.42□□□□□ -0.26
CCDC148-205ENST00000448656 PYM1Q9BRP8 204 aaKnown RBP13.42□□□□□ -0.26
CCDC148-205ENST00000448656 WDR90Q96KV7 1748 aa13.42□□□□□ -0.26
CCDC148-205ENST00000448656 VWA5AO00534 786 aa13.41□□□□□ -0.26
CCDC148-205ENST00000448656 SLC37A4O43826 429 aa13.41□□□□□ -0.26
CCDC148-205ENST00000448656 DSG3P32926 999 aa13.41□□□□□ -0.26
CCDC148-205ENST00000448656 ZNF76P36508 570 aa13.41□□□□□ -0.26
CCDC148-205ENST00000448656 UBA7P41226 1012 aa13.41□□□□□ -0.26
CCDC148-205ENST00000448656 ARHGAP4P98171 946 aa13.41□□□□□ -0.26
CCDC148-205ENST00000448656 KANK3Q6NY19 840 aa13.41□□□□□ -0.26
CCDC148-205ENST00000448656 GADL1Q6ZQY3 521 aa13.41□□□□□ -0.26
CCDC148-205ENST00000448656 CEP57L1Q8IYX8 460 aa13.41□□□□□ -0.26
CCDC148-205ENST00000448656 ERCC4Q92889 916 aaPredicted RBP13.41□□□□□ -0.26
CCDC148-205ENST00000448656 CLMNQ96JQ2 1002 aa13.41□□□□□ -0.26
CCDC148-205ENST00000448656 FUCA2Q9BTY2 467 aa13.41□□□□□ -0.26
CCDC148-205ENST00000448656 RAB34Q9BZG1 259 aa13.41□□□□□ -0.26
CCDC148-205ENST00000448656 HOMER2Q9NSB8 354 aa13.41□□□□□ -0.26
CCDC148-205ENST00000448656 HOXC10Q9NYD6 342 aa13.41□□□□□ -0.26
CCDC148-205ENST00000448656 SERTAD1Q9UHV2 236 aa13.41□□□□□ -0.26
CCDC148-205ENST00000448656 ZNF536O15090 1300 aa13.41□□□□□ -0.26
CCDC148-205ENST00000448656 XRCC6P12956 609 aaKnown RBP eCLIP13.4□□□□□ -0.26
CCDC148-205ENST00000448656 TECP42680 631 aa13.4□□□□□ -0.26
CCDC148-205ENST00000448656 TBC1D5Q92609 795 aa13.4□□□□□ -0.26
CCDC148-205ENST00000448656 ANP32BQ92688 251 aaKnown RBP13.4□□□□□ -0.26
CCDC148-205ENST00000448656 KIAA1468Q9P260 1216 aa13.4□□□□□ -0.26
CCDC148-205ENST00000448656 SPDYE5A6NIY4 337 aa13.4□□□□□ -0.26
CCDC148-205ENST00000448656 TRAF5O00463 557 aa13.4□□□□□ -0.26
CCDC148-205ENST00000448656 IRF6O14896 467 aa13.4□□□□□ -0.26
CCDC148-205ENST00000448656 SREBF1P36956 1147 aa13.4□□□□□ -0.26
CCDC148-205ENST00000448656 IQUBQ8NA54 791 aa13.4□□□□□ -0.26
CCDC148-205ENST00000448656 AK8Q96MA6 479 aa13.4□□□□□ -0.26
CCDC148-205ENST00000448656 CCDC39Q9UFE4 941 aa13.4□□□□□ -0.26
CCDC148-205ENST00000448656 CXCL11O14625 94 aa13.39□□□□□ -0.27
CCDC148-205ENST00000448656 EDIL3O43854 480 aa13.39□□□□□ -0.27
CCDC148-205ENST00000448656 CDC25AP30304 524 aa13.39□□□□□ -0.27
CCDC148-205ENST00000448656 STX1AQ16623 288 aa13.39□□□□□ -0.27
CCDC148-205ENST00000448656 ANO6Q4KMQ2 910 aa13.39□□□□□ -0.27
CCDC148-205ENST00000448656 MOXD1Q6UVY6 613 aa13.39□□□□□ -0.27
CCDC148-205ENST00000448656 OPTNQ96CV9 577 aa13.39□□□□□ -0.27
CCDC148-205ENST00000448656 TRERF1Q96PN7 1200 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms