RNA–Protein interactions for RNA: ENST00000448012.6

NPIPB3-202, Transcript of nuclear pore complex interacting protein family member B3, humanhuman

TSL 1 (best) BASIC

Gene NPIPB3, Length 1,216 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3-202ENST00000448012 RGS22Q8NE09 1264 aa12.77□□□□□ -0.37
NPIPB3-202ENST00000448012 TRIOBPQ9H2D6 2365 aa12.77□□□□□ -0.37
NPIPB3-202ENST00000448012 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.76□□□□□ -0.37
NPIPB3-202ENST00000448012 MYADML2A6NDP7 307 aa12.76□□□□□ -0.37
NPIPB3-202ENST00000448012 KLRF2D3W0D1 207 aa12.76□□□□□ -0.37
NPIPB3-202ENST00000448012 ARVCFO00192 962 aa12.76□□□□□ -0.37
NPIPB3-202ENST00000448012 KIAA0355O15063 1070 aa12.76□□□□□ -0.37
NPIPB3-202ENST00000448012 NKRFO15226 690 aaKnown RBP eCLIP12.76□□□□□ -0.37
NPIPB3-202ENST00000448012 SGSM2O43147 1006 aa12.76□□□□□ -0.37
NPIPB3-202ENST00000448012 SMPD1P17405 629 aa12.76□□□□□ -0.37
NPIPB3-202ENST00000448012 CPT1AP50416 773 aa12.76□□□□□ -0.37
NPIPB3-202ENST00000448012 BEX3Q00994 111 aa12.76□□□□□ -0.37
NPIPB3-202ENST00000448012 PPP2R5BQ15173 497 aa12.76□□□□□ -0.37
NPIPB3-202ENST00000448012 CENPQQ7L2Z9 268 aaPredicted RBP12.76□□□□□ -0.37
NPIPB3-202ENST00000448012 SCFD2Q8WU76 684 aa12.76□□□□□ -0.37
NPIPB3-202ENST00000448012 CLEC4DQ8WXI8 215 aa12.76□□□□□ -0.37
NPIPB3-202ENST00000448012 LRCH3Q96II8 777 aa12.76□□□□□ -0.37
NPIPB3-202ENST00000448012 AMNQ9BXJ7 453 aa12.76□□□□□ -0.37
NPIPB3-202ENST00000448012 WDR11Q9BZH6 1224 aa12.76□□□□□ -0.37
NPIPB3-202ENST00000448012 KATNBL1Q9H079 304 aa12.76□□□□□ -0.37
NPIPB3-202ENST00000448012 POLR3EQ9NVU0 708 aa12.76□□□□□ -0.37
NPIPB3-202ENST00000448012 FRMPD3Q5JV73 1810 aa12.76□□□□□ -0.37
NPIPB3-202ENST00000448012 TRIM43BA6NCK2 446 aa12.75□□□□□ -0.37
NPIPB3-202ENST00000448012 SOX1O00570 391 aaPredicted RBP12.75□□□□□ -0.37
NPIPB3-202ENST00000448012 CYP21A2P08686 494 aa12.75□□□□□ -0.37
NPIPB3-202ENST00000448012 PTH1RQ03431 593 aa12.75□□□□□ -0.37
NPIPB3-202ENST00000448012 FPGSQ05932 587 aa12.75□□□□□ -0.37
NPIPB3-202ENST00000448012 QRICH1Q2TAL8 776 aa12.75□□□□□ -0.37
NPIPB3-202ENST00000448012 DUSP28Q4G0W2 176 aa12.75□□□□□ -0.37
NPIPB3-202ENST00000448012 TMEM67Q5HYA8 995 aa12.75□□□□□ -0.37
NPIPB3-202ENST00000448012 CCSAPQ6IQ19 270 aaPredicted RBP12.75□□□□□ -0.37
NPIPB3-202ENST00000448012 TAPT1Q6NXT6 567 aa12.75□□□□□ -0.37
NPIPB3-202ENST00000448012 CXCL17Q6UXB2 119 aa12.75□□□□□ -0.37
NPIPB3-202ENST00000448012 DEFB123Q8N688 67 aa12.75□□□□□ -0.37
NPIPB3-202ENST00000448012 OR6J1Q8NGC5 347 aa12.75□□□□□ -0.37
NPIPB3-202ENST00000448012 MORC4Q8TE76 937 aa12.75□□□□□ -0.37
NPIPB3-202ENST00000448012 NSUN6Q8TEA1 469 aaKnown RBP12.75□□□□□ -0.37
NPIPB3-202ENST00000448012 TRIM43Q96BQ3 446 aaPredicted RBP12.75□□□□□ -0.37
NPIPB3-202ENST00000448012 CPVLQ9H3G5 476 aa12.75□□□□□ -0.37
NPIPB3-202ENST00000448012 PDGFCQ9NRA1 345 aa12.75□□□□□ -0.37
NPIPB3-202ENST00000448012 ZNFX1Q9P2E3 1918 aaKnown RBP12.75□□□□□ -0.37
NPIPB3-202ENST00000448012 PLXNA1Q9UIW2 1896 aa12.75□□□□□ -0.37
NPIPB3-202ENST00000448012 GNEQ9Y223 722 aaKnown RBP12.75□□□□□ -0.37
NPIPB3-202ENST00000448012 E7EWF7 191 aa12.74□□□□□ -0.37
NPIPB3-202ENST00000448012 ADCY6O43306 1168 aa12.74□□□□□ -0.37
NPIPB3-202ENST00000448012 KPNA6O60684 536 aa12.74□□□□□ -0.37
NPIPB3-202ENST00000448012 CFBP00751 764 aa12.74□□□□□ -0.37
NPIPB3-202ENST00000448012 NKX3-2P78367 333 aa12.74□□□□□ -0.37
NPIPB3-202ENST00000448012 TTLL4Q14679 1199 aa12.74□□□□□ -0.37
NPIPB3-202ENST00000448012 STXBP2Q15833 593 aa12.74□□□□□ -0.37
NPIPB3-202ENST00000448012 RNF20Q5VTR2 975 aa12.74□□□□□ -0.37
NPIPB3-202ENST00000448012 ARHGEF16Q5VV41 709 aa12.74□□□□□ -0.37
NPIPB3-202ENST00000448012 NFXL1Q6ZNB6 911 aa12.74□□□□□ -0.37
NPIPB3-202ENST00000448012 CYB5R4Q7L1T6 521 aa12.74□□□□□ -0.37
NPIPB3-202ENST00000448012 SH3RF1Q7Z6J0 888 aa12.74□□□□□ -0.37
NPIPB3-202ENST00000448012 HOMER1Q86YM7 354 aa12.74□□□□□ -0.37
NPIPB3-202ENST00000448012 TMEM199Q8N511 208 aa12.74□□□□□ -0.37
NPIPB3-202ENST00000448012 CTCFLQ8NI51 663 aaPredicted RBP12.74□□□□□ -0.37
NPIPB3-202ENST00000448012 RNPC3Q96LT9 517 aaKnown RBP12.74□□□□□ -0.37
NPIPB3-202ENST00000448012 PURBQ96QR8 312 aaKnown RBP12.74□□□□□ -0.37
NPIPB3-202ENST00000448012 IWS1Q96ST2 819 aa12.74□□□□□ -0.37
NPIPB3-202ENST00000448012 IL25Q9H293 177 aa12.74□□□□□ -0.37
NPIPB3-202ENST00000448012 JMJD4Q9H9V9 463 aa12.74□□□□□ -0.37
NPIPB3-202ENST00000448012 RBM8AQ9Y5S9 174 aaKnown RBP12.74□□□□□ -0.37
NPIPB3-202ENST00000448012 ALPK3Q96L96 1907 aa12.74□□□□□ -0.37
NPIPB3-202ENST00000448012 ASTN1O14525 1302 aa12.73□□□□□ -0.37
NPIPB3-202ENST00000448012 ZBTB5O15062 677 aa12.73□□□□□ -0.37
NPIPB3-202ENST00000448012 TIMP1P01033 207 aa12.73□□□□□ -0.37
NPIPB3-202ENST00000448012 MYL3P08590 195 aa12.73□□□□□ -0.37
NPIPB3-202ENST00000448012 SUPT20HL2P0C7V6 817 aa12.73□□□□□ -0.37
NPIPB3-202ENST00000448012 TXNP10599 105 aaKnown RBP12.73□□□□□ -0.37
NPIPB3-202ENST00000448012 KIF5BP33176 963 aa12.73□□□□□ -0.37
NPIPB3-202ENST00000448012 FAAP100Q0VG06 881 aa12.73□□□□□ -0.37
NPIPB3-202ENST00000448012 PPIGQ13427 754 aaKnown RBP eCLIP12.73□□□□□ -0.37
NPIPB3-202ENST00000448012 ITGA7Q13683 1181 aa12.73□□□□□ -0.37
NPIPB3-202ENST00000448012 SEC23AQ15436 765 aa12.73□□□□□ -0.37
NPIPB3-202ENST00000448012 SHHQ15465 462 aa12.73□□□□□ -0.37
NPIPB3-202ENST00000448012 TMTC2Q8N394 836 aa12.73□□□□□ -0.37
NPIPB3-202ENST00000448012 SAMD3Q8N6K7 520 aa12.73□□□□□ -0.37
NPIPB3-202ENST00000448012 MAP4K1Q92918 833 aa12.73□□□□□ -0.37
NPIPB3-202ENST00000448012 RMDN3Q96TC7 470 aa12.73□□□□□ -0.37
NPIPB3-202ENST00000448012 MTIF3Q9H2K0 278 aaKnown RBP12.73□□□□□ -0.37
NPIPB3-202ENST00000448012 RNF39Q9H2S5 420 aa12.73□□□□□ -0.37
NPIPB3-202ENST00000448012 ANO2Q9NQ90 1003 aa12.73□□□□□ -0.37
NPIPB3-202ENST00000448012 RBM47A0AV96 593 aaKnown RBP12.72□□□□□ -0.37
NPIPB3-202ENST00000448012 CCDC69A6NI79 296 aa12.72□□□□□ -0.37
NPIPB3-202ENST00000448012 MCM5P33992 734 aa12.72□□□□□ -0.37
NPIPB3-202ENST00000448012 GNAQP50148 359 aa12.72□□□□□ -0.37
NPIPB3-202ENST00000448012 CDK7P50613 346 aa12.72□□□□□ -0.37
NPIPB3-202ENST00000448012 IRX5P78411 483 aaPredicted RBP12.72□□□□□ -0.37
NPIPB3-202ENST00000448012 GRM4Q14833 912 aa12.72□□□□□ -0.37
NPIPB3-202ENST00000448012 FAM47CQ5HY64 1035 aa12.72□□□□□ -0.37
NPIPB3-202ENST00000448012 ZNF697Q5TEC3 545 aa12.72□□□□□ -0.37
NPIPB3-202ENST00000448012 SYTL5Q8TDW5 730 aaPredicted RBP12.72□□□□□ -0.37
NPIPB3-202ENST00000448012 MTG1Q9BT17 334 aaPredicted RBP12.72□□□□□ -0.37
NPIPB3-202ENST00000448012 MAP3K20Q9NYL2 800 aaKnown RBP12.72□□□□□ -0.37
NPIPB3-202ENST00000448012 PCDHA1Q9Y5I3 950 aa12.72□□□□□ -0.37
NPIPB3-202ENST00000448012 DDX49Q9Y6V7 483 aaKnown RBP12.72□□□□□ -0.37
NPIPB3-202ENST00000448012 PALM3A6NDB9 673 aaPredicted RBP12.71□□□□□ -0.37
NPIPB3-202ENST00000448012 NEFLP07196 543 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms