RNA–Protein interactions for RNA: ENST00000447839.6

ERCC6-203, Transcript of ERCC excision repair 6, chromatin remodeling factor, humanhuman

TSL 2 BASIC

Gene ERCC6, Length 3,411 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC6-203ENST00000447839 PLCG1P19174 1290 aa13.2□□□□□ -0.3
ERCC6-203ENST00000447839 CLK2P49760 499 aaKnown RBP13.2□□□□□ -0.3
ERCC6-203ENST00000447839 CCDC174Q6PII3 467 aa13.2□□□□□ -0.3
ERCC6-203ENST00000447839 CALML4Q96GE6 196 aa13.2□□□□□ -0.3
ERCC6-203ENST00000447839 CDK5RAP3Q96JB5 506 aa13.2□□□□□ -0.3
ERCC6-203ENST00000447839 ASTN2O75129 1339 aaPredicted RBP13.2□□□□□ -0.3
ERCC6-203ENST00000447839 ASNSP08243 561 aa13.2□□□□□ -0.3
ERCC6-203ENST00000447839 ORC2Q13416 577 aaPredicted RBP13.2□□□□□ -0.3
ERCC6-203ENST00000447839 TMC6Q7Z403 805 aa13.2□□□□□ -0.3
ERCC6-203ENST00000447839 GLIS2Q9BZE0 524 aaPredicted RBP13.2□□□□□ -0.3
ERCC6-203ENST00000447839 RAB34Q9BZG1 259 aa13.2□□□□□ -0.3
ERCC6-203ENST00000447839 SH2D4AQ9H788 454 aa13.2□□□□□ -0.3
ERCC6-203ENST00000447839 PTGER2P43116 358 aa13.2□□□□□ -0.3
ERCC6-203ENST00000447839 DNTTIP2Q5QJE6 756 aaKnown RBP13.2□□□□□ -0.3
ERCC6-203ENST00000447839 GJA10Q969M2 543 aa13.2□□□□□ -0.3
ERCC6-203ENST00000447839 ANO3Q9BYT9 981 aa13.2□□□□□ -0.3
ERCC6-203ENST00000447839 POTEMA6NI47 508 aa13.19□□□□□ -0.3
ERCC6-203ENST00000447839 SPDYE3A6NKU9 549 aa13.19□□□□□ -0.3
ERCC6-203ENST00000447839 RPN1P04843 607 aaKnown RBP13.19□□□□□ -0.3
ERCC6-203ENST00000447839 ZNF280AP59817 542 aaPredicted RBP13.19□□□□□ -0.3
ERCC6-203ENST00000447839 TPD52L1Q16890 204 aaPredicted RBP13.19□□□□□ -0.3
ERCC6-203ENST00000447839 NAALADL2Q58DX5 795 aa13.19□□□□□ -0.3
ERCC6-203ENST00000447839 ARHGAP27Q6ZUM4 889 aa13.19□□□□□ -0.3
ERCC6-203ENST00000447839 HSD3B7Q9H2F3 369 aa13.19□□□□□ -0.3
ERCC6-203ENST00000447839 VCPKMTQ9H867 229 aa13.19□□□□□ -0.3
ERCC6-203ENST00000447839 HACL1Q9UJ83 578 aa13.19□□□□□ -0.3
ERCC6-203ENST00000447839 PYCARDQ9ULZ3 195 aa13.19□□□□□ -0.3
ERCC6-203ENST00000447839 MAPK8IP1Q9UQF2 711 aa13.19□□□□□ -0.3
ERCC6-203ENST00000447839 HOXA13P31271 388 aaPredicted RBP13.19□□□□□ -0.3
ERCC6-203ENST00000447839 ARID5BQ14865 1188 aa13.19□□□□□ -0.3
ERCC6-203ENST00000447839 ENOX1Q8TC92 643 aaKnown RBP13.19□□□□□ -0.3
ERCC6-203ENST00000447839 MTMR9Q96QG7 549 aa13.19□□□□□ -0.3
ERCC6-203ENST00000447839 ZNF341Q9BYN7 854 aa13.19□□□□□ -0.3
ERCC6-203ENST00000447839 RMND1Q9NWS8 449 aa13.19□□□□□ -0.3
ERCC6-203ENST00000447839 EDIL3O43854 480 aa13.19□□□□□ -0.3
ERCC6-203ENST00000447839 COBLO75128 1261 aa13.19□□□□□ -0.3
ERCC6-203ENST00000447839 CD44P16070 742 aaKnown RBP13.19□□□□□ -0.3
ERCC6-203ENST00000447839 PRELPP51888 382 aa13.19□□□□□ -0.3
ERCC6-203ENST00000447839 KIF4BQ2VIQ3 1234 aa13.19□□□□□ -0.3
ERCC6-203ENST00000447839 PPP4R3AQ6IN85 833 aa13.19□□□□□ -0.3
ERCC6-203ENST00000447839 CHURC1Q8WUH1 139 aa13.19□□□□□ -0.3
ERCC6-203ENST00000447839 UPF1Q92900 1129 aaKnown RBP eCLIP13.19□□□□□ -0.3
ERCC6-203ENST00000447839 SRCAPQ6ZRS2 3230 aa13.19□□□□□ -0.3
ERCC6-203ENST00000447839 MEIS2O14770 477 aa13.18□□□□□ -0.3
ERCC6-203ENST00000447839 CBFA2T2O43439 604 aa13.18□□□□□ -0.3
ERCC6-203ENST00000447839 ERCC5P28715 1186 aaPredicted RBP13.18□□□□□ -0.3
ERCC6-203ENST00000447839 BTNL9Q6UXG8 535 aa13.18□□□□□ -0.3
ERCC6-203ENST00000447839 FCHSD1Q86WN1 690 aa13.18□□□□□ -0.3
ERCC6-203ENST00000447839 CREBRFQ8IUR6 639 aa13.18□□□□□ -0.3
ERCC6-203ENST00000447839 CACTINQ8WUQ7 758 aaKnown RBP13.18□□□□□ -0.3
ERCC6-203ENST00000447839 DEFB129Q9H1M3 183 aa13.18□□□□□ -0.3
ERCC6-203ENST00000447839 SAMSN1Q9NSI8 373 aaKnown RBP13.18□□□□□ -0.3
ERCC6-203ENST00000447839 SYNPO2Q9UMS6 1093 aa13.18□□□□□ -0.3
ERCC6-203ENST00000447839 CTNND2Q9UQB3 1225 aa13.18□□□□□ -0.3
ERCC6-203ENST00000447839 FER1L6Q2WGJ9 1857 aa13.18□□□□□ -0.3
ERCC6-203ENST00000447839 SYNRGQ9UMZ2 1314 aa13.18□□□□□ -0.3
ERCC6-203ENST00000447839 H7C1D1 291 aa13.18□□□□□ -0.3
ERCC6-203ENST00000447839 IGSF22Q8N9C0 903 aa13.18□□□□□ -0.3
ERCC6-203ENST00000447839 DPF2Q92785 391 aa13.18□□□□□ -0.3
ERCC6-203ENST00000447839 FZD9O00144 591 aa13.17□□□□□ -0.3
ERCC6-203ENST00000447839 CFBP00751 764 aa13.17□□□□□ -0.3
ERCC6-203ENST00000447839 GCFC2P16383 781 aaKnown RBP13.17□□□□□ -0.3
ERCC6-203ENST00000447839 NOLC1Q14978 699 aaKnown RBP eCLIP13.17□□□□□ -0.3
ERCC6-203ENST00000447839 PTPN21Q16825 1174 aa13.17□□□□□ -0.3
ERCC6-203ENST00000447839 KRT79Q5XKE5 535 aa13.17□□□□□ -0.3
ERCC6-203ENST00000447839 SNX29Q8TEQ0 813 aa13.17□□□□□ -0.3
ERCC6-203ENST00000447839 FBXO28Q9NVF7 368 aa13.17□□□□□ -0.3
ERCC6-203ENST00000447839 PCDHA12Q9UN75 941 aa13.17□□□□□ -0.3
ERCC6-203ENST00000447839 ZNF541Q9H0D2 1346 aa13.17□□□□□ -0.3
ERCC6-203ENST00000447839 PRAMEF18Q5VWM3 479 aa13.17□□□□□ -0.3
ERCC6-203ENST00000447839 PGAP2Q9UHJ9 254 aa13.17□□□□□ -0.3
ERCC6-203ENST00000447839 LTBP3Q9NS15 1303 aa13.17□□□□□ -0.3
ERCC6-203ENST00000447839 FXR2P51116 673 aaKnown RBP eCLIP13.17□□□□□ -0.3
ERCC6-203ENST00000447839 AP3B2Q13367 1082 aa13.17□□□□□ -0.3
ERCC6-203ENST00000447839 NAP1L5Q96NT1 182 aaPredicted RBP13.17□□□□□ -0.3
ERCC6-203ENST00000447839 NAP1L4Q99733 375 aaKnown RBP13.17□□□□□ -0.3
ERCC6-203ENST00000447839 GDAQ9Y2T3 454 aa13.17□□□□□ -0.3
ERCC6-203ENST00000447839 PPP1R3GB7ZBB8 358 aa13.16□□□□□ -0.3
ERCC6-203ENST00000447839 ZNF76P36508 570 aa13.16□□□□□ -0.3
ERCC6-203ENST00000447839 MMP14P50281 582 aa13.16□□□□□ -0.3
ERCC6-203ENST00000447839 ARHGAP4P98171 946 aa13.16□□□□□ -0.3
ERCC6-203ENST00000447839 PRR16Q569H4 304 aa13.16□□□□□ -0.3
ERCC6-203ENST00000447839 ZNF658Q5TYW1 1059 aaPredicted RBP13.16□□□□□ -0.3
ERCC6-203ENST00000447839 LRRC8AQ8IWT6 810 aa13.16□□□□□ -0.3
ERCC6-203ENST00000447839 TEPSINQ96N21 525 aa13.16□□□□□ -0.3
ERCC6-203ENST00000447839 MMTAG2Q9BU76 263 aaKnown RBP13.16□□□□□ -0.3
ERCC6-203ENST00000447839 CUEDC2Q9H467 287 aa13.16□□□□□ -0.3
ERCC6-203ENST00000447839 KBTBD4Q9NVX7 518 aa13.16□□□□□ -0.3
ERCC6-203ENST00000447839 ASIC1P78348 528 aa13.16□□□□□ -0.3
ERCC6-203ENST00000447839 AMPD3Q01432 767 aa13.16□□□□□ -0.3
ERCC6-203ENST00000447839 NBPF12Q5TAG4 269 aaPredicted RBP13.16□□□□□ -0.3
ERCC6-203ENST00000447839 SPATA1Q5VX52 437 aa13.16□□□□□ -0.3
ERCC6-203ENST00000447839 LRRC15Q8TF66 581 aa13.16□□□□□ -0.3
ERCC6-203ENST00000447839 CCDC47Q96A33 483 aaKnown RBP13.16□□□□□ -0.3
ERCC6-203ENST00000447839 MED15Q96RN5 788 aa13.16□□□□□ -0.3
ERCC6-203ENST00000447839 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.16□□□□□ -0.3
ERCC6-203ENST00000447839 USP11P51784 963 aa13.16□□□□□ -0.3
ERCC6-203ENST00000447839 TRAF1Q13077 416 aa13.16□□□□□ -0.3
ERCC6-203ENST00000447839 KMT5BQ4FZB7 885 aa13.16□□□□□ -0.3
ERCC6-203ENST00000447839 KIAA1524Q8TCG1 905 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms