RNA–Protein interactions for RNA: ENST00000447155.1

HMGB1P16-201, Transcript of high mobility group box 1 pseudogene 16, humanhuman

BASIC

Gene HMGB1P16, Length 540 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P16-201ENST00000447155 LOC101059915A0A1B0GWI6 518 aaPredicted RBP6.19□□□□□ -1.42
HMGB1P16-201ENST00000447155 ARNTLO00327 626 aa6.19□□□□□ -1.42
HMGB1P16-201ENST00000447155 APPP05067 770 aa6.19□□□□□ -1.42
HMGB1P16-201ENST00000447155 VIL1P09327 827 aaKnown RBP6.19□□□□□ -1.42
HMGB1P16-201ENST00000447155 CD96P40200 585 aa6.19□□□□□ -1.42
HMGB1P16-201ENST00000447155 GPR85P60893 370 aa6.19□□□□□ -1.42
HMGB1P16-201ENST00000447155 HLA-DQA1Q5Y7H0 255 aa6.19□□□□□ -1.42
HMGB1P16-201ENST00000447155 KCNT2Q6UVM3 1135 aa6.19□□□□□ -1.42
HMGB1P16-201ENST00000447155 KRT26Q7Z3Y9 468 aa6.19□□□□□ -1.42
HMGB1P16-201ENST00000447155 DTX1Q86Y01 620 aa6.19□□□□□ -1.42
HMGB1P16-201ENST00000447155 IFNL3Q8IZI9 196 aa6.19□□□□□ -1.42
HMGB1P16-201ENST00000447155 TNFRSF10DQ9UBN6 386 aa6.19□□□□□ -1.42
HMGB1P16-201ENST00000447155 TRAF6Q9Y4K3 522 aa6.19□□□□□ -1.42
HMGB1P16-201ENST00000447155 KIAA1324LA8MWY0 1029 aaPredicted RBP6.18□□□□□ -1.42
HMGB1P16-201ENST00000447155 DNAJC8O75937 253 aaPredicted RBP6.18□□□□□ -1.42
HMGB1P16-201ENST00000447155 ASLP04424 464 aa6.18□□□□□ -1.42
HMGB1P16-201ENST00000447155 CD8BP10966 210 aa6.18□□□□□ -1.42
HMGB1P16-201ENST00000447155 MYCLP1P12525 358 aaPredicted RBP6.18□□□□□ -1.42
HMGB1P16-201ENST00000447155 SDSP20132 328 aa6.18□□□□□ -1.42
HMGB1P16-201ENST00000447155 IBSPP21815 317 aaPredicted RBP6.18□□□□□ -1.42
HMGB1P16-201ENST00000447155 ZP2Q05996 745 aa6.18□□□□□ -1.42
HMGB1P16-201ENST00000447155 DUSP4Q13115 394 aa6.18□□□□□ -1.42
HMGB1P16-201ENST00000447155 SPRED2Q7Z698 418 aa6.18□□□□□ -1.42
HMGB1P16-201ENST00000447155 FGD2Q7Z6J4 655 aa6.18□□□□□ -1.42
HMGB1P16-201ENST00000447155 LRRTM3Q86VH5 581 aa6.18□□□□□ -1.42
HMGB1P16-201ENST00000447155 THNSL2Q86YJ6 484 aa6.18□□□□□ -1.42
HMGB1P16-201ENST00000447155 ANKRD13AQ8IZ07 590 aa6.18□□□□□ -1.42
HMGB1P16-201ENST00000447155 TMEM52Q8NDY8 209 aa6.18□□□□□ -1.42
HMGB1P16-201ENST00000447155 PUM2Q8TB72 1066 aaKnown RBP eCLIP6.18□□□□□ -1.42
HMGB1P16-201ENST00000447155 SCLYQ96I15 445 aa6.18□□□□□ -1.42
HMGB1P16-201ENST00000447155 GPATCH3Q96I76 525 aa6.18□□□□□ -1.42
HMGB1P16-201ENST00000447155 MAP6Q96JE9 813 aa6.18□□□□□ -1.42
HMGB1P16-201ENST00000447155 COL4A3BPQ9Y5P4 624 aa6.18□□□□□ -1.42
HMGB1P16-201ENST00000447155 A0A087X0B3 334 aa6.17□□□□□ -1.42
HMGB1P16-201ENST00000447155 MED26O95402 600 aa6.17□□□□□ -1.42
HMGB1P16-201ENST00000447155 CRTAMO95727 393 aa6.17□□□□□ -1.42
HMGB1P16-201ENST00000447155 HMGB1P09429 215 aaKnown RBP6.17□□□□□ -1.42
HMGB1P16-201ENST00000447155 SPINK2P20155 84 aa6.17□□□□□ -1.42
HMGB1P16-201ENST00000447155 ITGB7P26010 798 aa6.17□□□□□ -1.42
HMGB1P16-201ENST00000447155 CD97P48960 835 aa6.17□□□□□ -1.42
HMGB1P16-201ENST00000447155 GUCY1A3Q02108 690 aa6.17□□□□□ -1.42
HMGB1P16-201ENST00000447155 LAPTM5Q13571 262 aa6.17□□□□□ -1.42
HMGB1P16-201ENST00000447155 MTDHQ86UE4 582 aaKnown RBP6.17□□□□□ -1.42
HMGB1P16-201ENST00000447155 CPNE8Q86YQ8 564 aa6.17□□□□□ -1.42
HMGB1P16-201ENST00000447155 WFDC3Q8IUB2 231 aa6.17□□□□□ -1.42
HMGB1P16-201ENST00000447155 RCBTB1Q8NDN9 531 aa6.17□□□□□ -1.42
HMGB1P16-201ENST00000447155 CHAC2Q8WUX2 184 aa6.17□□□□□ -1.42
HMGB1P16-201ENST00000447155 CCDC120Q96HB5 630 aa6.17□□□□□ -1.42
HMGB1P16-201ENST00000447155 ALPK1Q96QP1 1244 aa6.17□□□□□ -1.42
HMGB1P16-201ENST00000447155 G6PC3Q9BUM1 346 aa6.17□□□□□ -1.42
HMGB1P16-201ENST00000447155 SLAMF8Q9P0V8 285 aa6.17□□□□□ -1.42
HMGB1P16-201ENST00000447155 CCDC39Q9UFE4 941 aa6.17□□□□□ -1.42
HMGB1P16-201ENST00000447155 MAPRE3Q9UPY8 281 aa6.17□□□□□ -1.42
HMGB1P16-201ENST00000447155 TCRBV16S1A1N1A0A5B0 115 aa6.16□□□□□ -1.42
HMGB1P16-201ENST00000447155 C7orf72A4D263 438 aa6.16□□□□□ -1.42
HMGB1P16-201ENST00000447155 GSG1L2A8MUP6 293 aa6.16□□□□□ -1.42
HMGB1P16-201ENST00000447155 B4E1Z4 1266 aa6.16□□□□□ -1.42
HMGB1P16-201ENST00000447155 PPM1GO15355 546 aaPredicted RBP6.16□□□□□ -1.42
HMGB1P16-201ENST00000447155 MYO1BO43795 1136 aa6.16□□□□□ -1.42
HMGB1P16-201ENST00000447155 OPA1O60313 960 aa6.16□□□□□ -1.42
HMGB1P16-201ENST00000447155 NPHS1O60500 1241 aa6.16□□□□□ -1.42
HMGB1P16-201ENST00000447155 PDE8AO60658 829 aa6.16□□□□□ -1.42
HMGB1P16-201ENST00000447155 LCP1P13796 627 aa6.16□□□□□ -1.42
HMGB1P16-201ENST00000447155 SSTR4P31391 388 aa6.16□□□□□ -1.42
HMGB1P16-201ENST00000447155 IGFALSP35858 605 aa6.16□□□□□ -1.42
HMGB1P16-201ENST00000447155 STAT3P40763 770 aa6.16□□□□□ -1.42
HMGB1P16-201ENST00000447155 CEBPAP49715 358 aaPredicted RBP6.16□□□□□ -1.42
HMGB1P16-201ENST00000447155 GTF2A2P52657 109 aa6.16□□□□□ -1.42
HMGB1P16-201ENST00000447155 INF2Q27J81 1249 aa6.16□□□□□ -1.42
HMGB1P16-201ENST00000447155 KIZQ2M2Z5 673 aa6.16□□□□□ -1.42
HMGB1P16-201ENST00000447155 MBLAC2Q68D91 279 aa6.16□□□□□ -1.42
HMGB1P16-201ENST00000447155 LBX2Q6XYB7 198 aa6.16□□□□□ -1.42
HMGB1P16-201ENST00000447155 ZNF574Q6ZN55 896 aaPredicted RBP6.16□□□□□ -1.42
HMGB1P16-201ENST00000447155 JAMLQ86YT9 394 aa6.16□□□□□ -1.42
HMGB1P16-201ENST00000447155 AHI1Q8N157 1196 aa6.16□□□□□ -1.42
HMGB1P16-201ENST00000447155 PPM1KQ8N3J5 372 aa6.16□□□□□ -1.42
HMGB1P16-201ENST00000447155 FLCNQ8NFG4 579 aa6.16□□□□□ -1.42
HMGB1P16-201ENST00000447155 LINC01599Q8WXQ3 324 aa6.16□□□□□ -1.42
HMGB1P16-201ENST00000447155 DDX1Q92499 740 aaKnown RBP6.16□□□□□ -1.42
HMGB1P16-201ENST00000447155 HHIPL1Q96JK4 782 aa6.16□□□□□ -1.42
HMGB1P16-201ENST00000447155 ALG1Q9BT22 464 aa6.16□□□□□ -1.42
HMGB1P16-201ENST00000447155 ADAMTS10Q9H324 1103 aa6.16□□□□□ -1.42
HMGB1P16-201ENST00000447155 CAAP1Q9H8G2 361 aa6.16□□□□□ -1.42
HMGB1P16-201ENST00000447155 PCDH12Q9NPG4 1184 aa6.16□□□□□ -1.42
HMGB1P16-201ENST00000447155 TMEM59LQ9UK28 342 aa6.16□□□□□ -1.42
HMGB1P16-201ENST00000447155 ANGEL1Q9UNK9 670 aaKnown RBP6.16□□□□□ -1.42
HMGB1P16-201ENST00000447155 NOP58Q9Y2X3 529 aaKnown RBP6.16□□□□□ -1.42
HMGB1P16-201ENST00000447155 PCDHA9Q9Y5H5 950 aa6.16□□□□□ -1.42
HMGB1P16-201ENST00000447155 TNPO3Q9Y5L0 923 aaKnown RBP6.16□□□□□ -1.42
HMGB1P16-201ENST00000447155 hCG_2014768A0A024R1R8 64 aa6.15□□□□□ -1.42
HMGB1P16-201ENST00000447155 LOC100996750A0A140TA64 210 aa6.15□□□□□ -1.42
HMGB1P16-201ENST00000447155 A0A1W2PQ45 241 aaPredicted RBP6.15□□□□□ -1.42
HMGB1P16-201ENST00000447155 A0A1W2PQY0 241 aa6.15□□□□□ -1.42
HMGB1P16-201ENST00000447155 FADS2P1A8MWK0 482 aa6.15□□□□□ -1.42
HMGB1P16-201ENST00000447155 ARVCFO00192 962 aa6.15□□□□□ -1.42
HMGB1P16-201ENST00000447155 MSCO60682 206 aa6.15□□□□□ -1.42
HMGB1P16-201ENST00000447155 RASGRP1O95267 797 aa6.15□□□□□ -1.42
HMGB1P16-201ENST00000447155 ZGLP1P0C6A0 271 aa6.15□□□□□ -1.42
HMGB1P16-201ENST00000447155 HSP90B1P14625 803 aaKnown RBP6.15□□□□□ -1.42
HMGB1P16-201ENST00000447155 POU3F2P20265 443 aaPredicted RBP6.15□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms