RNA–Protein interactions for RNA: ENST00000446987.5

DDX56-206, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,853 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-206ENST00000446987 ENGASEQ8NFI3 743 aa14.68□□□□□ -0.06
DDX56-206ENST00000446987 RUFY2Q8WXA3 655 aa14.68□□□□□ -0.06
DDX56-206ENST00000446987 ITFG2Q969R8 447 aa14.68□□□□□ -0.06
DDX56-206ENST00000446987 FAM212AQ96EL1 285 aa14.68□□□□□ -0.06
DDX56-206ENST00000446987 FAM204AQ9H8W3 233 aa14.68□□□□□ -0.06
DDX56-206ENST00000446987 RCOR1Q9UKL0 485 aa14.68□□□□□ -0.06
DDX56-206ENST00000446987 ZBTB21Q9ULJ3 1066 aa14.68□□□□□ -0.06
DDX56-206ENST00000446987 KCNH4Q9UQ05 1017 aa14.68□□□□□ -0.06
DDX56-206ENST00000446987 PPP2R2CQ9Y2T4 447 aa14.68□□□□□ -0.06
DDX56-206ENST00000446987 CUTAO60888 179 aa14.67□□□□□ -0.06
DDX56-206ENST00000446987 FGAP02671 866 aa14.67□□□□□ -0.06
DDX56-206ENST00000446987 CDK8P49336 464 aa14.67□□□□□ -0.06
DDX56-206ENST00000446987 RESTQ13127 1097 aa14.67□□□□□ -0.06
DDX56-206ENST00000446987 NKX2-3Q8TAU0 364 aa14.67□□□□□ -0.06
DDX56-206ENST00000446987 MAGEC3Q8TD91 643 aa14.67□□□□□ -0.06
DDX56-206ENST00000446987 NAPBQ9H115 298 aa14.67□□□□□ -0.06
DDX56-206ENST00000446987 IFNKQ9P0W0 207 aa14.67□□□□□ -0.06
DDX56-206ENST00000446987 PRPF6O94906 941 aaKnown RBP14.67□□□□□ -0.06
DDX56-206ENST00000446987 MCM3P25205 808 aa14.67□□□□□ -0.06
DDX56-206ENST00000446987 GNG11P61952 73 aa14.67□□□□□ -0.06
DDX56-206ENST00000446987 PPATQ06203 517 aa14.67□□□□□ -0.06
DDX56-206ENST00000446987 PPARAQ07869 468 aa14.67□□□□□ -0.06
DDX56-206ENST00000446987 PLCB4Q15147 1175 aa14.67□□□□□ -0.06
DDX56-206ENST00000446987 WDR93Q6P2C0 686 aa14.67□□□□□ -0.06
DDX56-206ENST00000446987 EPC1Q9H2F5 836 aa14.67□□□□□ -0.06
DDX56-206ENST00000446987 DDX52Q9Y2R4 599 aaKnown RBP eCLIP14.67□□□□□ -0.06
DDX56-206ENST00000446987 AFG3L2Q9Y4W6 797 aa14.67□□□□□ -0.06
DDX56-206ENST00000446987 TESPA1A2RU30 521 aaPredicted RBP14.66□□□□□ -0.06
DDX56-206ENST00000446987 TTC36A6NLP5 189 aa14.66□□□□□ -0.06
DDX56-206ENST00000446987 MINDY4BA8MYZ0 360 aa14.66□□□□□ -0.06
DDX56-206ENST00000446987 GH2P01242 217 aa14.66□□□□□ -0.06
DDX56-206ENST00000446987 AKR1B1P15121 316 aa14.66□□□□□ -0.06
DDX56-206ENST00000446987 RASA1P20936 1047 aa14.66□□□□□ -0.06
DDX56-206ENST00000446987 SCP2P22307 547 aa14.66□□□□□ -0.06
DDX56-206ENST00000446987 PSMA5P28066 241 aa14.66□□□□□ -0.06
DDX56-206ENST00000446987 PTH1RQ03431 593 aa14.66□□□□□ -0.06
DDX56-206ENST00000446987 YTHDF3Q7Z739 585 aaKnown RBP14.66□□□□□ -0.06
DDX56-206ENST00000446987 BRI3BPQ8WY22 251 aa14.66□□□□□ -0.06
DDX56-206ENST00000446987 PTPN18Q99952 460 aa14.66□□□□□ -0.06
DDX56-206ENST00000446987 DSCC1Q9BVC3 393 aa14.66□□□□□ -0.06
DDX56-206ENST00000446987 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.66□□□□□ -0.06
DDX56-206ENST00000446987 WBP1LQ9NX94 342 aa14.66□□□□□ -0.06
DDX56-206ENST00000446987 SWAP70Q9UH65 585 aa14.66□□□□□ -0.06
DDX56-206ENST00000446987 ANAPC4Q9UJX5 808 aa14.66□□□□□ -0.06
DDX56-206ENST00000446987 TAOK2Q9UL54 1235 aa14.66□□□□□ -0.06
DDX56-206ENST00000446987 IGF2BP3O00425 579 aaKnown RBP eCLIP14.65□□□□□ -0.06
DDX56-206ENST00000446987 STX10O60499 249 aa14.65□□□□□ -0.06
DDX56-206ENST00000446987 LIG3P49916 1009 aa14.65□□□□□ -0.06
DDX56-206ENST00000446987 CTDSPL2Q05D32 466 aa14.65□□□□□ -0.06
DDX56-206ENST00000446987 GRIK3Q13003 919 aa14.65□□□□□ -0.06
DDX56-206ENST00000446987 CERKLQ49MI3 558 aaPredicted RBP14.65□□□□□ -0.06
DDX56-206ENST00000446987 CLEC10AQ8IUN9 316 aa14.65□□□□□ -0.06
DDX56-206ENST00000446987 STK11IPQ8N1F8 1099 aa14.65□□□□□ -0.06
DDX56-206ENST00000446987 PAGR1Q9BTK6 254 aa14.65□□□□□ -0.06
DDX56-206ENST00000446987 NACAP1Q9BZK3 213 aa14.65□□□□□ -0.06
DDX56-206ENST00000446987 INCENPQ9NQS7 918 aa14.65□□□□□ -0.06
DDX56-206ENST00000446987 TFIP11Q9UBB9 837 aaKnown RBP14.65□□□□□ -0.06
DDX56-206ENST00000446987 ASNSP08243 561 aa14.65□□□□□ -0.06
DDX56-206ENST00000446987 TM4SF4P48230 202 aa14.65□□□□□ -0.06
DDX56-206ENST00000446987 FNTAP49354 379 aa14.65□□□□□ -0.06
DDX56-206ENST00000446987 BIRC2Q13490 618 aa14.65□□□□□ -0.06
DDX56-206ENST00000446987 DGKZQ13574 1117 aa14.65□□□□□ -0.06
DDX56-206ENST00000446987 B4GALNT4Q76KP1 1039 aa14.65□□□□□ -0.06
DDX56-206ENST00000446987 TBC1D10CQ8IV04 446 aa14.65□□□□□ -0.06
DDX56-206ENST00000446987 PLCD4Q9BRC7 762 aa14.65□□□□□ -0.06
DDX56-206ENST00000446987 TRIM6Q9C030 488 aaPredicted RBP14.65□□□□□ -0.06
DDX56-206ENST00000446987 ABCB6Q9NP58 842 aa14.65□□□□□ -0.06
DDX56-206ENST00000446987 PICK1Q9NRD5 415 aa14.65□□□□□ -0.06
DDX56-206ENST00000446987 CDC23Q9UJX2 597 aa14.65□□□□□ -0.06
DDX56-206ENST00000446987 SH3BP1Q9Y3L3 701 aa14.65□□□□□ -0.06
DDX56-206ENST00000446987 ZHX2Q9Y6X8 837 aa14.65□□□□□ -0.06
DDX56-206ENST00000446987 MYH4Q9Y623 1939 aa14.64□□□□□ -0.07
DDX56-206ENST00000446987 PLIN4Q96Q06 1357 aa14.64□□□□□ -0.07
DDX56-206ENST00000446987 A0A1B0GUA9 196 aa14.64□□□□□ -0.07
DDX56-206ENST00000446987 N4BP1O75113 896 aaKnown RBP14.64□□□□□ -0.07
DDX56-206ENST00000446987 RNF40O75150 1001 aa14.64□□□□□ -0.07
DDX56-206ENST00000446987 FGRP09769 529 aa14.64□□□□□ -0.07
DDX56-206ENST00000446987 ZKSCAN1P17029 563 aaPredicted RBP14.64□□□□□ -0.07
DDX56-206ENST00000446987 FERMT3Q86UX7 667 aa14.64□□□□□ -0.07
DDX56-206ENST00000446987 TMEM139Q8IV31 216 aa14.64□□□□□ -0.07
DDX56-206ENST00000446987 JAKMIP1Q96N16 626 aaKnown RBP14.64□□□□□ -0.07
DDX56-206ENST00000446987 WDR24Q96S15 920 aa14.64□□□□□ -0.07
DDX56-206ENST00000446987 JPH2Q9BR39 696 aaPredicted RBP14.64□□□□□ -0.07
DDX56-206ENST00000446987 A0A0G2JLL6 359 aaPredicted RBP14.63□□□□□ -0.07
DDX56-206ENST00000446987 MANSC4A6NHS7 340 aaPredicted RBP14.63□□□□□ -0.07
DDX56-206ENST00000446987 PRDM1O75626 825 aa14.63□□□□□ -0.07
DDX56-206ENST00000446987 ARHGAP25P42331 645 aa14.63□□□□□ -0.07
DDX56-206ENST00000446987 HAND2P61296 217 aa14.63□□□□□ -0.07
DDX56-206ENST00000446987 ADCY2Q08462 1091 aa14.63□□□□□ -0.07
DDX56-206ENST00000446987 SEPT2Q15019 361 aa14.63□□□□□ -0.07
DDX56-206ENST00000446987 ABCB5Q2M3G0 1257 aa14.63□□□□□ -0.07
DDX56-206ENST00000446987 ISM2Q6H9L7 571 aa14.63□□□□□ -0.07
DDX56-206ENST00000446987 CPLX2Q6PUV4 134 aaKnown RBP14.63□□□□□ -0.07
DDX56-206ENST00000446987 PRRT2Q7Z6L0 340 aaPredicted RBP14.63□□□□□ -0.07
DDX56-206ENST00000446987 SIAH1Q8IUQ4 282 aa14.63□□□□□ -0.07
DDX56-206ENST00000446987 CCDC50Q8IVM0 306 aa14.63□□□□□ -0.07
DDX56-206ENST00000446987 WDR18Q9BV38 432 aa14.63□□□□□ -0.07
DDX56-206ENST00000446987 GINM1Q9NU53 330 aa14.63□□□□□ -0.07
DDX56-206ENST00000446987 TPCN1Q9ULQ1 816 aa14.63□□□□□ -0.07
DDX56-206ENST00000446987 TAF6LQ9Y6J9 622 aa14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms